| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59711710
Identifier: 59711710
GI number: 59711710
Start: 1216528
End: 1216995
Strand: Direct
Name: 59711710
Synonym: VF_1103
Alternate gene names: NA
Gene position: 1216528-1216995 (Clockwise)
Preceding gene: 59711709
Following gene: 59711711
Centisome position: 41.98
GC content: 35.68
Gene sequence:
>468_bases ATGTGTTCCAAGCTTGAGTTAAAAGTACCGCCACCTCTTGTTATGTTGCTATTAATGGGAACCGTTTTTCTCTTTGATAG ATTACTTCCTTTCCAAATTTTTTATATACCAACACTGACGGTAACATTGAGCATTATGTTTGTCGTTCTTGGTGCTGTGA TTTCATTATCAGGTGTTCGAGAATTTAAACGTGCTCAAACAACCGTTAACCCTTTAAAACCAGAAAACAGCTCATCTCTT GTCGATTCAGGTATCTATCAATACACACGTAACCCTATGTACCTTGGATTTTTATTAATATTAATAAGTTCAGTTGTTTA CACTCAAAATCCGCTAGGTCTGGTCAGTGCTCTTTTATTTGTTACCTATATGAATCGTTATCAAATTGAGCCAGAAGAAA GAGCGTTGGTAAAAATATTTGGTGATGAATTCAAATTGTATGCAGAGCAAGTTAACCGCTGGTTTTGA
Upstream 100 bases:
>100_bases TGAAAGTGATGAGAAGTGCTATTCTTATGTTAGAAAGCATTGATAAAAAGTAATAATAAACGGTTATACGGATTTAATCG GTTATATTTAAGGATAAATA
Downstream 100 bases:
>100_bases ATTTACATTACTCTGACATTATTAGCTCTGATTCGTCTAACAGCTCACGAATTAACCACTTAAATTAATTTAAAATTGTT TCATAAACGAGGCATCATGG
Product: hypothetical protein
Products: NA
Alternate protein names: Isoprenylcysteine Carboxyl Methyltransferase Family Protein; Protein-S-Isoprenylcysteine Methyltransferase; S-Isoprenylcysteine Methyltransferase-Like Protein; Protein-S-Isoprenylcysteine Methyltransferase-Like Protein; Protein-S-Isoprenylcysteine Methyltransferase-Like; Protein-S-Isoprenylcysteine O-Methyltransferase
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MCSKLELKVPPPLVMLLLMGTVFLFDRLLPFQIFYIPTLTVTLSIMFVVLGAVISLSGVREFKRAQTTVNPLKPENSSSL VDSGIYQYTRNPMYLGFLLILISSVVYTQNPLGLVSALLFVTYMNRYQIEPEERALVKIFGDEFKLYAEQVNRWF
Sequences:
>Translated_155_residues MCSKLELKVPPPLVMLLLMGTVFLFDRLLPFQIFYIPTLTVTLSIMFVVLGAVISLSGVREFKRAQTTVNPLKPENSSSL VDSGIYQYTRNPMYLGFLLILISSVVYTQNPLGLVSALLFVTYMNRYQIEPEERALVKIFGDEFKLYAEQVNRWF >Mature_155_residues MCSKLELKVPPPLVMLLLMGTVFLFDRLLPFQIFYIPTLTVTLSIMFVVLGAVISLSGVREFKRAQTTVNPLKPENSSSL VDSGIYQYTRNPMYLGFLLILISSVVYTQNPLGLVSALLFVTYMNRYQIEPEERALVKIFGDEFKLYAEQVNRWF
Specific function: Unknown
COG id: COG2020
COG function: function code O; Putative protein-S-isoprenylcysteine methyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17740; Mature: 17740
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCSKLELKVPPPLVMLLLMGTVFLFDRLLPFQIFYIPTLTVTLSIMFVVLGAVISLSGVR CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EFKRAQTTVNPLKPENSSSLVDSGIYQYTRNPMYLGFLLILISSVVYTQNPLGLVSALLF HHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH VTYMNRYQIEPEERALVKIFGDEFKLYAEQVNRWF HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MCSKLELKVPPPLVMLLLMGTVFLFDRLLPFQIFYIPTLTVTLSIMFVVLGAVISLSGVR CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EFKRAQTTVNPLKPENSSSLVDSGIYQYTRNPMYLGFLLILISSVVYTQNPLGLVSALLF HHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH VTYMNRYQIEPEERALVKIFGDEFKLYAEQVNRWF HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA