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The map label for this gene is yiaN [C]

Identifier: 59711697

GI number: 59711697

Start: 1201246

End: 1203156

Strand: Direct

Name: yiaN [C]

Synonym: VF_1090

Alternate gene names: 59711697

Gene position: 1201246-1203156 (Clockwise)

Preceding gene: 59711696

Following gene: 59711700

Centisome position: 41.46

GC content: 38.93

Gene sequence:

>1911_bases
ATGGACATTATAACTGATAAAAACCAAAGCGATGTCGATGAGTATTTACCTCATGAAAGAACGGTCACTGTATTTGGATT
CTTAATTTTAAGCATTGCTGTTGCATTATCCGCTTTTCAAATATGGCAGGGAATAAGCTCGACAATCTCTGCTACTTATT
TTAGGCCTATCCACTTATGTTGGGTTCTCATTCTCATCTTTTTGCATTACCCGTTAATTAATAATCGAAAGAGTTCTTTG
TATTTAGCTGGGAGAGTTATCGATCTTATTTTGTGTGGTTTGATTGTTTTTGCTGCTTATCGAATGACGATATTTGATTA
TAACGATATCAACCATCTCTTTTATGGGTTGCAATTACCCGATATGGTTGCGGGTTGTTCATTGATTATTTTATTAATGG
AAGGCTGCCGTCGTACTGTTGGATGGGTAATGGTACTTATTGCTGTGTTATTTTTATCTTATAGCGCATTTGGAGATATG
TTACCTGCAGGTTTCGCAATTAAATCATATACCTTACAAGAGCTTATTCAGTTTCAAATTTTTTCTGCTAACGGCATATT
TGGTTCTGCATTAGGGATTGCTGCAACCACCGTTTTTGTCTTTGTTTTATTTGGAGCTTTTCTTGAGGTAACCGGGGCCG
GGAAATTTTTTATTGATTTAGCCTTTTCTATTGCGGGTAAATATCGAGGTGGTCCAGCAAAAGCGGCGGTATTAGCATCG
GCCGGATTAGGTTCTATTTCTGGTTCTGCAATTGCGAACACGGTAACAACCGGTTCGATCACCATTCCAATGATGAAGAA
ACTCGGTTATAAGCCAGAACAGGCTGCAGGAATAGAAGCCGCTGCATCAACTGGTGGGCAAATAATGCCACCAATTATGG
GGGCTGGGGCATTTGTAATGGCACAATTTACCGGTGTCCCTTATAGCGAGATCATGCTTGCATCTATTGCTCCTGCAATT
TTGTATTTCTTTTGTACCTTGCTCTATGTGCATTTAATGGCATGTAAACTGAATCTTAAAGCAGCAAATCGAACTGAAGC
TGTAATGAGTGTTATGAAAGAGGGAGCTCATCATTTAATTCCACTAGCATTAATCACAACATTATTGATGATGGCGTATT
CTCCATTATTAGTTGGCGTCGCTGGTTGTGCTGCAATTTTAGTGACCGCAGCTTTAAGAAAGCACAGCCGAATAGGATTA
CAAAAATTCATTGAAGGCATGAAAAATGGAGCTTTAATGGCATTACCTATTTCGGCTGCATGTGGTGCTGCTGGGATAAT
TGTTGGTGTGGTTGGACAAACCGGAATTGGATTACAGTTTACTCAATTTGTTATGGATTTTTCGGGAGGTTACTTACTTA
TAGCTCTTGGGTTAATAAGTATTGTAGCGTTAGTACTCGGAATGGGGTTACCTGTAACAGCCGCTTATATTGTATTAGCC
GTAATGGCGGTTCCGATGTTAAGTGACTTTGGTTTATCACTATTAACAGCACATCTTATTGTTTTTTGGTTATCGCAGAC
ATCAAATGTAACGCCACCAATTGCGCTAGCTGCATTTGCTGGAGCAGGAGTTGCTAATGCTAATCCAATGAAGTCATCAG
TAGAAGCATTTAAATTGGCTGGTGGTTTGTTCATTATTCCAATAATGATGGCATATACAAATCTGGTTGATTCTAGTGCA
GGAGCTTGGAGTTTAACCTTATCGATTGTGCAAACATTGACGATTATTATAGCGATTGCCGTATCAATTGAAGGGTATTT
ATTACGTGTACTAACAACAGCTGAAAGGTTATTGGCTTTCTCTACTATTCCTTTAATTTTGTTAAATCCATTCGGTGCCG
GTTTCGTTGGAATTATCATTATTGCGGGATTGATATTGACTCAATGGCGAGGAAAACCTCAAGTAACATAA

Upstream 100 bases:

>100_bases
CAATCTTGAAGTAATTAAACTGTTTTACTCAATATTAAATGGAAGGGTAAGAGTTCTGCTTACCTTTCTTCTTTTCTGAC
TTTATCCTACAGGCATTAAT

Downstream 100 bases:

>100_bases
AACAGAATTTAGTTTCAGATATTAAAGCCCTTAGAGATAAGATCCTAAGGGCTTTTTATTTAAGTACAATTTTTTAAATT
TTAAAGAATGCCAGCTCTTC

Product: transporter

Products: NA

Alternate protein names: Trap Transporter 4tm/12tm Fusion Protein; TRAP Transporter; TRAP-Type Transport System Fused Permease Component; TRAP-Type Transport System Permease Protein; TRAP-Type Transport System Permease Component; TRAP-Type Transporter 4TM/12TM Fusion Protein; TRAP-T Family Transporter With Fused DctQ/DctM Subunits; Trap Family Transporter; TRAP-Type Transporter Permease Component; Permease; TRAP-Type Transport System Permease; TRAP Transporter Large Permease; TRAP Transport System Permease Component; TRAP-Type Transporter Fused Permeases; Trap Transporter; C4-Dicarboxylate Transporter; TRAP Type Transporter Protein; TRAP-T Family Transporter Fused Inner Membrane Subunits; TRAP Transporter Transmembrane Protein; TRAP Transporter Permease; Integral Membrane Protein; Transcriptional Regulator DeoR Family; N-Carbamoyl-L-Amino Acid Hydrolase; TRAP Family Transporter; TRAP-Type Transport System Fused Permease Components; 4TM/12TM TRAP Transporter; TRAP-Type Transport System; TRAP Transporter Membrane-Spanning Component

Number of amino acids: Translated: 636; Mature: 636

Protein sequence:

>636_residues
MDIITDKNQSDVDEYLPHERTVTVFGFLILSIAVALSAFQIWQGISSTISATYFRPIHLCWVLILIFLHYPLINNRKSSL
YLAGRVIDLILCGLIVFAAYRMTIFDYNDINHLFYGLQLPDMVAGCSLIILLMEGCRRTVGWVMVLIAVLFLSYSAFGDM
LPAGFAIKSYTLQELIQFQIFSANGIFGSALGIAATTVFVFVLFGAFLEVTGAGKFFIDLAFSIAGKYRGGPAKAAVLAS
AGLGSISGSAIANTVTTGSITIPMMKKLGYKPEQAAGIEAAASTGGQIMPPIMGAGAFVMAQFTGVPYSEIMLASIAPAI
LYFFCTLLYVHLMACKLNLKAANRTEAVMSVMKEGAHHLIPLALITTLLMMAYSPLLVGVAGCAAILVTAALRKHSRIGL
QKFIEGMKNGALMALPISAACGAAGIIVGVVGQTGIGLQFTQFVMDFSGGYLLIALGLISIVALVLGMGLPVTAAYIVLA
VMAVPMLSDFGLSLLTAHLIVFWLSQTSNVTPPIALAAFAGAGVANANPMKSSVEAFKLAGGLFIIPIMMAYTNLVDSSA
GAWSLTLSIVQTLTIIIAIAVSIEGYLLRVLTTAERLLAFSTIPLILLNPFGAGFVGIIIIAGLILTQWRGKPQVT

Sequences:

>Translated_636_residues
MDIITDKNQSDVDEYLPHERTVTVFGFLILSIAVALSAFQIWQGISSTISATYFRPIHLCWVLILIFLHYPLINNRKSSL
YLAGRVIDLILCGLIVFAAYRMTIFDYNDINHLFYGLQLPDMVAGCSLIILLMEGCRRTVGWVMVLIAVLFLSYSAFGDM
LPAGFAIKSYTLQELIQFQIFSANGIFGSALGIAATTVFVFVLFGAFLEVTGAGKFFIDLAFSIAGKYRGGPAKAAVLAS
AGLGSISGSAIANTVTTGSITIPMMKKLGYKPEQAAGIEAAASTGGQIMPPIMGAGAFVMAQFTGVPYSEIMLASIAPAI
LYFFCTLLYVHLMACKLNLKAANRTEAVMSVMKEGAHHLIPLALITTLLMMAYSPLLVGVAGCAAILVTAALRKHSRIGL
QKFIEGMKNGALMALPISAACGAAGIIVGVVGQTGIGLQFTQFVMDFSGGYLLIALGLISIVALVLGMGLPVTAAYIVLA
VMAVPMLSDFGLSLLTAHLIVFWLSQTSNVTPPIALAAFAGAGVANANPMKSSVEAFKLAGGLFIIPIMMAYTNLVDSSA
GAWSLTLSIVQTLTIIIAIAVSIEGYLLRVLTTAERLLAFSTIPLILLNPFGAGFVGIIIIAGLILTQWRGKPQVT
>Mature_636_residues
MDIITDKNQSDVDEYLPHERTVTVFGFLILSIAVALSAFQIWQGISSTISATYFRPIHLCWVLILIFLHYPLINNRKSSL
YLAGRVIDLILCGLIVFAAYRMTIFDYNDINHLFYGLQLPDMVAGCSLIILLMEGCRRTVGWVMVLIAVLFLSYSAFGDM
LPAGFAIKSYTLQELIQFQIFSANGIFGSALGIAATTVFVFVLFGAFLEVTGAGKFFIDLAFSIAGKYRGGPAKAAVLAS
AGLGSISGSAIANTVTTGSITIPMMKKLGYKPEQAAGIEAAASTGGQIMPPIMGAGAFVMAQFTGVPYSEIMLASIAPAI
LYFFCTLLYVHLMACKLNLKAANRTEAVMSVMKEGAHHLIPLALITTLLMMAYSPLLVGVAGCAAILVTAALRKHSRIGL
QKFIEGMKNGALMALPISAACGAAGIIVGVVGQTGIGLQFTQFVMDFSGGYLLIALGLISIVALVLGMGLPVTAAYIVLA
VMAVPMLSDFGLSLLTAHLIVFWLSQTSNVTPPIALAAFAGAGVANANPMKSSVEAFKLAGGLFIIPIMMAYTNLVDSSA
GAWSLTLSIVQTLTIIIAIAVSIEGYLLRVLTTAERLLAFSTIPLILLNPFGAGFVGIIIIAGLILTQWRGKPQVT

Specific function: Unknown

COG id: COG4666

COG function: function code R; TRAP-type uncharacterized transport system, fused permease components

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 67381; Mature: 67381

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIITDKNQSDVDEYLPHERTVTVFGFLILSIAVALSAFQIWQGISSTISATYFRPIHLC
CCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WVLILIFLHYPLINNRKSSLYLAGRVIDLILCGLIVFAAYRMTIFDYNDINHLFYGLQLP
HHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHCCCCCH
DMVAGCSLIILLMEGCRRTVGWVMVLIAVLFLSYSAFGDMLPAGFAIKSYTLQELIQFQI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
FSANGIFGSALGIAATTVFVFVLFGAFLEVTGAGKFFIDLAFSIAGKYRGGPAKAAVLAS
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHH
AGLGSISGSAIANTVTTGSITIPMMKKLGYKPEQAAGIEAAASTGGQIMPPIMGAGAFVM
CCCCCCCCCHHHHHCCCCCEEHHHHHHCCCCCCHHCCCHHHHCCCCCCCCHHHCCCHHHH
AQFTGVPYSEIMLASIAPAILYFFCTLLYVHLMACKLNLKAANRTEAVMSVMKEGAHHLI
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHH
PLALITTLLMMAYSPLLVGVAGCAAILVTAALRKHSRIGLQKFIEGMKNGALMALPISAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEECHHH
CGAAGIIVGVVGQTGIGLQFTQFVMDFSGGYLLIALGLISIVALVLGMGLPVTAAYIVLA
CCHHHHHHEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
VMAVPMLSDFGLSLLTAHLIVFWLSQTSNVTPPIALAAFAGAGVANANPMKSSVEAFKLA
HHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHH
GGLFIIPIMMAYTNLVDSSAGAWSLTLSIVQTLTIIIAIAVSIEGYLLRVLTTAERLLAF
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
STIPLILLNPFGAGFVGIIIIAGLILTQWRGKPQVT
HHCCHHEECCCCCHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MDIITDKNQSDVDEYLPHERTVTVFGFLILSIAVALSAFQIWQGISSTISATYFRPIHLC
CCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WVLILIFLHYPLINNRKSSLYLAGRVIDLILCGLIVFAAYRMTIFDYNDINHLFYGLQLP
HHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHCCCCCH
DMVAGCSLIILLMEGCRRTVGWVMVLIAVLFLSYSAFGDMLPAGFAIKSYTLQELIQFQI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
FSANGIFGSALGIAATTVFVFVLFGAFLEVTGAGKFFIDLAFSIAGKYRGGPAKAAVLAS
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHH
AGLGSISGSAIANTVTTGSITIPMMKKLGYKPEQAAGIEAAASTGGQIMPPIMGAGAFVM
CCCCCCCCCHHHHHCCCCCEEHHHHHHCCCCCCHHCCCHHHHCCCCCCCCHHHCCCHHHH
AQFTGVPYSEIMLASIAPAILYFFCTLLYVHLMACKLNLKAANRTEAVMSVMKEGAHHLI
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHH
PLALITTLLMMAYSPLLVGVAGCAAILVTAALRKHSRIGLQKFIEGMKNGALMALPISAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEECHHH
CGAAGIIVGVVGQTGIGLQFTQFVMDFSGGYLLIALGLISIVALVLGMGLPVTAAYIVLA
CCHHHHHHEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
VMAVPMLSDFGLSLLTAHLIVFWLSQTSNVTPPIALAAFAGAGVANANPMKSSVEAFKLA
HHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHH
GGLFIIPIMMAYTNLVDSSAGAWSLTLSIVQTLTIIIAIAVSIEGYLLRVLTTAERLLAF
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
STIPLILLNPFGAGFVGIIIIAGLILTQWRGKPQVT
HHCCHHEECCCCCHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA