Click here to switch to the map view.

The map label for this gene is 59711680

Identifier: 59711680

GI number: 59711680

Start: 1186281

End: 1187234

Strand: Reverse

Name: 59711680

Synonym: VF_1073

Alternate gene names: NA

Gene position: 1187234-1186281 (Counterclockwise)

Preceding gene: 59711681

Following gene: 59711678

Centisome position: 40.97

GC content: 36.9

Gene sequence:

>954_bases
ATGAATTTACGTAAGTTATCGCTTATGTTATGTGTAACAGCATCTCCAGCAATGGCTCAACTTGCAGATCAAGAAGGTGT
CAGTGGTGAAATAGCAATTACCGCAGGCTTTGCTTCATCGACATCTAACTTCAATACTGAAGGAAGTGACACAATTTCAT
CTAACACTCAAGCACCAACCTCTGAAGATAGTTTTCTTGCGTTCCCACTAGGAAGCATCACTTACACCTTTGGTGATGCA
CTAAATCAGCAAGTATATACAGGTACAAGCCGTCAGGATGTGGCAACAGGTATTGTTGTGTTAGAGGTAGGTTATAGATA
TCAATTTGAATCCAGAATGGTCATGGATTTCGCTATTCTTCCTACTATCATGTCAAGTGAGACGTGGGAAAACCCATATT
TAGTCAATCAATCTCGAACAAAAACAGATGAATCAGGCAATGCATTTCGTTTTCAATTGAAAAATATTGCAGGTTCAAAC
TTTAGCCTTGATAGTGCCTTTGCAACAAAAGAAATAGACACCGACAAGGTTATCGATGAGTTAAAACGCGACGCTAATAC
GATTTATTTAAAAGGACAATATAGACAACCACTAAGCAGAACAATGCTTGTGATGCCATCGATTATTTATCAATCCTCTT
CTGCCGAGGGTAAAGCAAATTCATACGACCAATACGGTGTAGAAGTCAGCGTATTTAAATTAATGCAAAGACATCAAATT
GTATTAACTGCCGGTTATGCTCAACGTCAATATGAATCGACAAATCCGATTTATAATAAAACACGTGAGAATAATAAACT
CAGTTTGTTTGCTGCTTATGAATACAAAAATATCATGGATTGGAAAGATTGGTCGCTCGTTGCTTTTGCAGGATATGGCA
CAGAACAATCAAATATCACTTTCTACGATAACTCTGAATACATTATTTCTACTGGCTTAAATTATAAGTTTTAA

Upstream 100 bases:

>100_bases
AAAGTTTATAATTTTTACTTCGACTTCTTTGTTGATATATTTCTGCGTTACTGTTTCAATATAGTTAATTAAATAATAAT
AACACTAGGATTGACTATTC

Downstream 100 bases:

>100_bases
TCTCAGCGGCCGCCTCTTGAGTACACTCCTTTAACCATTTAATTAAAGGAGTTCTCCGATTTTTACTCGCTACAACAAGC
CCTATTTCTCCACCCGGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MNLRKLSLMLCVTASPAMAQLADQEGVSGEIAITAGFASSTSNFNTEGSDTISSNTQAPTSEDSFLAFPLGSITYTFGDA
LNQQVYTGTSRQDVATGIVVLEVGYRYQFESRMVMDFAILPTIMSSETWENPYLVNQSRTKTDESGNAFRFQLKNIAGSN
FSLDSAFATKEIDTDKVIDELKRDANTIYLKGQYRQPLSRTMLVMPSIIYQSSSAEGKANSYDQYGVEVSVFKLMQRHQI
VLTAGYAQRQYESTNPIYNKTRENNKLSLFAAYEYKNIMDWKDWSLVAFAGYGTEQSNITFYDNSEYIISTGLNYKF

Sequences:

>Translated_317_residues
MNLRKLSLMLCVTASPAMAQLADQEGVSGEIAITAGFASSTSNFNTEGSDTISSNTQAPTSEDSFLAFPLGSITYTFGDA
LNQQVYTGTSRQDVATGIVVLEVGYRYQFESRMVMDFAILPTIMSSETWENPYLVNQSRTKTDESGNAFRFQLKNIAGSN
FSLDSAFATKEIDTDKVIDELKRDANTIYLKGQYRQPLSRTMLVMPSIIYQSSSAEGKANSYDQYGVEVSVFKLMQRHQI
VLTAGYAQRQYESTNPIYNKTRENNKLSLFAAYEYKNIMDWKDWSLVAFAGYGTEQSNITFYDNSEYIISTGLNYKF
>Mature_317_residues
MNLRKLSLMLCVTASPAMAQLADQEGVSGEIAITAGFASSTSNFNTEGSDTISSNTQAPTSEDSFLAFPLGSITYTFGDA
LNQQVYTGTSRQDVATGIVVLEVGYRYQFESRMVMDFAILPTIMSSETWENPYLVNQSRTKTDESGNAFRFQLKNIAGSN
FSLDSAFATKEIDTDKVIDELKRDANTIYLKGQYRQPLSRTMLVMPSIIYQSSSAEGKANSYDQYGVEVSVFKLMQRHQI
VLTAGYAQRQYESTNPIYNKTRENNKLSLFAAYEYKNIMDWKDWSLVAFAGYGTEQSNITFYDNSEYIISTGLNYKF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35516; Mature: 35516

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLRKLSLMLCVTASPAMAQLADQEGVSGEIAITAGFASSTSNFNTEGSDTISSNTQAPT
CCCCEEEEEEEEECCCHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
SEDSFLAFPLGSITYTFGDALNQQVYTGTSRQDVATGIVVLEVGYRYQFESRMVMDFAIL
CCCCEEEEECCCEEEEHHHHCCCEEECCCCCHHHHCEEEEEEECCEEEECCEEEEHHHHH
PTIMSSETWENPYLVNQSRTKTDESGNAFRFQLKNIAGSNFSLDSAFATKEIDTDKVIDE
HHHHCCCCCCCCEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHCCCCCHHHHHHH
LKRDANTIYLKGQYRQPLSRTMLVMPSIIYQSSSAEGKANSYDQYGVEVSVFKLMQRHQI
HHCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCHHHHHHHHHCEE
VLTAGYAQRQYESTNPIYNKTRENNKLSLFAAYEYKNIMDWKDWSLVAFAGYGTEQSNIT
EEEECCHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCCCCEE
FYDNSEYIISTGLNYKF
EEECCCEEEECCCCCCC
>Mature Secondary Structure
MNLRKLSLMLCVTASPAMAQLADQEGVSGEIAITAGFASSTSNFNTEGSDTISSNTQAPT
CCCCEEEEEEEEECCCHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
SEDSFLAFPLGSITYTFGDALNQQVYTGTSRQDVATGIVVLEVGYRYQFESRMVMDFAIL
CCCCEEEEECCCEEEEHHHHCCCEEECCCCCHHHHCEEEEEEECCEEEECCEEEEHHHHH
PTIMSSETWENPYLVNQSRTKTDESGNAFRFQLKNIAGSNFSLDSAFATKEIDTDKVIDE
HHHHCCCCCCCCEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHCCCCCHHHHHHH
LKRDANTIYLKGQYRQPLSRTMLVMPSIIYQSSSAEGKANSYDQYGVEVSVFKLMQRHQI
HHCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCHHHHHHHHHCEE
VLTAGYAQRQYESTNPIYNKTRENNKLSLFAAYEYKNIMDWKDWSLVAFAGYGTEQSNIT
EEEECCHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCCCCEE
FYDNSEYIISTGLNYKF
EEECCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA