| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59711653
Identifier: 59711653
GI number: 59711653
Start: 1153074
End: 1153664
Strand: Direct
Name: 59711653
Synonym: VF_1046
Alternate gene names: NA
Gene position: 1153074-1153664 (Clockwise)
Preceding gene: 59711652
Following gene: 59711654
Centisome position: 39.79
GC content: 34.69
Gene sequence:
>591_bases ATGCTGGCAAAATTAGGAGTTAGGAACTTGAAAGGTTTAGATATAAATAGGCAGTTTAATATGATCTTGCGGGCTATCTC TGCAATTATTCTACTTTTAGTACCAATTTACTTTGGGTATTTAGGAAAGACGACTGAAATGGGGTTACTCATTGTTTCTG GTTTTTTAGGTTTAGTTTTTTCTAGCTTAGATAAATTTGAAAGCTTTAAAGCCGGTGGGGTTGAAGCCAAATTAAGGTAT GAACAAATTAAAGCTGTTTTAGAAAAGGAAATTGAACCAGAGTATTCTAATGAAACTGAGTCTTCGGATATTAATAATCC AAACTTGAAACTAGTTCCTGAAAATGCACAATCTGTCTTAACGGCTTTAAATAATTCAGATTATACGTGGCGTTATGTTT CTGGTATTAGTCAATCGATAAAATTAGATAGAATTGATGTTAAGGCAGCACTTAAATGGCTCTTTGAACATGGGTACGTT AAGAAATCTATTGGCAAAAACGGTCAGATTTGGACGGTAACTTCAGAAGGTAGGAATTTATACGTGAGGATTCGATTCAA AGATGTACAAGGTGGGGTTGTGCCAGCATAA
Upstream 100 bases:
>100_bases TGCATCAACACGATTTGCTACATTCGGCATTCTAGGTTTCTTTGGCTTTACCGTGTTAAGTGGTAAATTTAGGCTTAATC TGCATAGTAGCAGACGTGTT
Downstream 100 bases:
>100_bases CGCCTGCATCACACGACTTGCTATGCTCGGCATTCTAGATTTCTTTGAGTTTACCGTTTTAAGTGATAAATTTTGGCTTA ATCTGCATGGTAGCAAACGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MLAKLGVRNLKGLDINRQFNMILRAISAIILLLVPIYFGYLGKTTEMGLLIVSGFLGLVFSSLDKFESFKAGGVEAKLRY EQIKAVLEKEIEPEYSNETESSDINNPNLKLVPENAQSVLTALNNSDYTWRYVSGISQSIKLDRIDVKAALKWLFEHGYV KKSIGKNGQIWTVTSEGRNLYVRIRFKDVQGGVVPA
Sequences:
>Translated_196_residues MLAKLGVRNLKGLDINRQFNMILRAISAIILLLVPIYFGYLGKTTEMGLLIVSGFLGLVFSSLDKFESFKAGGVEAKLRY EQIKAVLEKEIEPEYSNETESSDINNPNLKLVPENAQSVLTALNNSDYTWRYVSGISQSIKLDRIDVKAALKWLFEHGYV KKSIGKNGQIWTVTSEGRNLYVRIRFKDVQGGVVPA >Mature_196_residues MLAKLGVRNLKGLDINRQFNMILRAISAIILLLVPIYFGYLGKTTEMGLLIVSGFLGLVFSSLDKFESFKAGGVEAKLRY EQIKAVLEKEIEPEYSNETESSDINNPNLKLVPENAQSVLTALNNSDYTWRYVSGISQSIKLDRIDVKAALKWLFEHGYV KKSIGKNGQIWTVTSEGRNLYVRIRFKDVQGGVVPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21976; Mature: 21976
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAKLGVRNLKGLDINRQFNMILRAISAIILLLVPIYFGYLGKTTEMGLLIVSGFLGLVF CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH SSLDKFESFKAGGVEAKLRYEQIKAVLEKEIEPEYSNETESSDINNPNLKLVPENAQSVL HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCHHHHH TALNNSDYTWRYVSGISQSIKLDRIDVKAALKWLFEHGYVKKSIGKNGQIWTVTSEGRNL HHHCCCCCEEHHHHCCHHHCEEHHHHHHHHHHHHHHCCCHHHHCCCCCCEEEEECCCCEE YVRIRFKDVQGGVVPA EEEEEEEECCCCCCCC >Mature Secondary Structure MLAKLGVRNLKGLDINRQFNMILRAISAIILLLVPIYFGYLGKTTEMGLLIVSGFLGLVF CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH SSLDKFESFKAGGVEAKLRYEQIKAVLEKEIEPEYSNETESSDINNPNLKLVPENAQSVL HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCHHHHH TALNNSDYTWRYVSGISQSIKLDRIDVKAALKWLFEHGYVKKSIGKNGQIWTVTSEGRNL HHHCCCCCEEHHHHCCHHHCEEHHHHHHHHHHHHHHCCCHHHHCCCCCCEEEEECCCCEE YVRIRFKDVQGGVVPA EEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA