Definition Vibrio fischeri ES114 chromosome I, complete genome.
Accession NC_006840
Length 2,897,536

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The map label for this gene is 59711591

Identifier: 59711591

GI number: 59711591

Start: 1078776

End: 1079165

Strand: Reverse

Name: 59711591

Synonym: VF_0984

Alternate gene names: NA

Gene position: 1079165-1078776 (Counterclockwise)

Preceding gene: 59711593

Following gene: 59711590

Centisome position: 37.24

GC content: 37.69

Gene sequence:

>390_bases
ATGAATAAATCAGTAGTAATTGCAATAACCTCAGCATTATTTATCGCAGGGTGTTCAATACAATCAGAAAAAACACCAGC
GATTTCATCAGATAATATCAATCCAATTTGTAATGTAGATAATAATATGGCTGGTGGCTGGGTCACGTCTAGCGTAACAC
CAGAAGCAAAAGAAGCGGTTGAGCACGTTTTAAGTATGATGAATACATCAGCTAAACTTAAACAAATATTAGATGTAAAA
ACTCAGGTAGTGAATGGCATTAATTACGCGATTGATTTTGAGCTTGATGATGGCCAAGTCTGGAATACTCGTGTGTATCG
CAGCCTTAAAGGTCAATACCAAATGACTCAACCTGCTCAGCAAGGCAGCATGACTCAAGATTGCCAATAA

Upstream 100 bases:

>100_bases
AAATGAGATTAATGATTAAAAAAATACGATTAGTTTGGAATTCTGTCTCTTAAGGATTAGATTAAACTTAAGAAAAATTC
TTACCATACATGGAGTCACC

Downstream 100 bases:

>100_bases
CAACATCATAATTCAAAGGACACTCTAATGCTTAAAAAAACAGTAATTACGGTTTCGATGCTATTAACATTAGCTGCGTG
CAGTTCATCTGAAACTCCAG

Product: putative lipoprotein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MNKSVVIAITSALFIAGCSIQSEKTPAISSDNINPICNVDNNMAGGWVTSSVTPEAKEAVEHVLSMMNTSAKLKQILDVK
TQVVNGINYAIDFELDDGQVWNTRVYRSLKGQYQMTQPAQQGSMTQDCQ

Sequences:

>Translated_129_residues
MNKSVVIAITSALFIAGCSIQSEKTPAISSDNINPICNVDNNMAGGWVTSSVTPEAKEAVEHVLSMMNTSAKLKQILDVK
TQVVNGINYAIDFELDDGQVWNTRVYRSLKGQYQMTQPAQQGSMTQDCQ
>Mature_129_residues
MNKSVVIAITSALFIAGCSIQSEKTPAISSDNINPICNVDNNMAGGWVTSSVTPEAKEAVEHVLSMMNTSAKLKQILDVK
TQVVNGINYAIDFELDDGQVWNTRVYRSLKGQYQMTQPAQQGSMTQDCQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14073; Mature: 14073

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKSVVIAITSALFIAGCSIQSEKTPAISSDNINPICNVDNNMAGGWVTSSVTPEAKEAV
CCCCEEEEEEHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCCCCEEECCCCCHHHHHH
EHVLSMMNTSAKLKQILDVKTQVVNGINYAIDFELDDGQVWNTRVYRSLKGQYQMTQPAQ
HHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEHHHHHHHHCCCCCCCCCHH
QGSMTQDCQ
CCCCCCCCC
>Mature Secondary Structure
MNKSVVIAITSALFIAGCSIQSEKTPAISSDNINPICNVDNNMAGGWVTSSVTPEAKEAV
CCCCEEEEEEHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCCCCEEECCCCCHHHHHH
EHVLSMMNTSAKLKQILDVKTQVVNGINYAIDFELDDGQVWNTRVYRSLKGQYQMTQPAQ
HHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEHHHHHHHHCCCCCCCCCHH
QGSMTQDCQ
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA