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The map label for this gene is rimK [H]

Identifier: 59711553

GI number: 59711553

Start: 1041399

End: 1042169

Strand: Reverse

Name: rimK [H]

Synonym: VF_0946

Alternate gene names: 59711553

Gene position: 1042169-1041399 (Counterclockwise)

Preceding gene: 59711554

Following gene: 59711552

Centisome position: 35.97

GC content: 38.13

Gene sequence:

>771_bases
ATGATCCAACGAATTCTACCACTGGTTGCAGTTTTAAGCCTTTCTGGCTGTGCTCTTACACAACAAGCTCAACCTTTAGC
TTCAGACAATTCAGAAACCGTCGCTGCAATTAAATCAATGGAAACCAACCTGAATACTCGTTTAGATACGATGGAAGGTA
AAATTGAGACTCAAAACGAGTATATTTCTACATTAGAAAAAGAATTATCTAACGTTTCTGAAGAATTATCTATTGTTCGT
TCAGAACAAACAAAAATTCAAAACAGCATTAGAGTCGCGACATCTAAGAAAAAACGTCTTGCCCCGCTGCCTGTTTCTAT
GCAATCTCAAGCTCTAAAAGACACCATTGTGCTTGGCGCAATTGAAAACGTTGAAATCGCTGATATCAAACAAGCATTTA
CCGCTCGTATTGATACAGGTGCAACAACCTCTTCTTTAAATGCAGTTGATTTACAAGAATTTGAACGTAATGGTAGCCAA
TGGGTTCGATTCCATTTAGTAAACCAAGACGTAAAAGCTGACGATGGCAAATTGGAGTGGATTACAGCACCTGTTATTCG
TAACGTAAAAATTCGTCAAGCAACAGCTGATGATGCAGAACGCCGTCCAGTAGTTGAATTATGGATCAAACTTGGTGCAA
TCCATGAAAAAGTTCAATTTACTCTTGCAGATCGATCTCACATGACCCATTCTGTTTTATTAGGTCGTGAGTTTATTCAA
GATATCGCTGTTGTTGATGTCAGCAAAGAATTCGTTCAAAGCAAAAAATAG

Upstream 100 bases:

>100_bases
ATAGCAAAGAAACCTGACTAAACTTTAACATTTGGGGGCTATTCGCTCCCATTTATTATCGTTATTATGCACATGTTAAT
TTAACTCAACGGAACATAAA

Downstream 100 bases:

>100_bases
CTCCTACCTCAAATAAGCGGTAATTTATTCAATATCTTAGTAGCATAAATTACCGCATGAATTACAATTATAATTATCTT
CCACTTATGCCATTACAATG

Product: ATP-dependent Zn protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MIQRILPLVAVLSLSGCALTQQAQPLASDNSETVAAIKSMETNLNTRLDTMEGKIETQNEYISTLEKELSNVSEELSIVR
SEQTKIQNSIRVATSKKKRLAPLPVSMQSQALKDTIVLGAIENVEIADIKQAFTARIDTGATTSSLNAVDLQEFERNGSQ
WVRFHLVNQDVKADDGKLEWITAPVIRNVKIRQATADDAERRPVVELWIKLGAIHEKVQFTLADRSHMTHSVLLGREFIQ
DIAVVDVSKEFVQSKK

Sequences:

>Translated_256_residues
MIQRILPLVAVLSLSGCALTQQAQPLASDNSETVAAIKSMETNLNTRLDTMEGKIETQNEYISTLEKELSNVSEELSIVR
SEQTKIQNSIRVATSKKKRLAPLPVSMQSQALKDTIVLGAIENVEIADIKQAFTARIDTGATTSSLNAVDLQEFERNGSQ
WVRFHLVNQDVKADDGKLEWITAPVIRNVKIRQATADDAERRPVVELWIKLGAIHEKVQFTLADRSHMTHSVLLGREFIQ
DIAVVDVSKEFVQSKK
>Mature_256_residues
MIQRILPLVAVLSLSGCALTQQAQPLASDNSETVAAIKSMETNLNTRLDTMEGKIETQNEYISTLEKELSNVSEELSIVR
SEQTKIQNSIRVATSKKKRLAPLPVSMQSQALKDTIVLGAIENVEIADIKQAFTARIDTGATTSSLNAVDLQEFERNGSQ
WVRFHLVNQDVKADDGKLEWITAPVIRNVKIRQATADDAERRPVVELWIKLGAIHEKVQFTLADRSHMTHSVLLGREFIQ
DIAVVDVSKEFVQSKK

Specific function: Responsible for the addition of glutamate residues to the C-terminus of ribosomal protein S6 [H]

COG id: COG4067

COG function: function code O; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ATP-grasp domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011761
- InterPro:   IPR013651
- InterPro:   IPR013815
- InterPro:   IPR013816
- InterPro:   IPR008503
- InterPro:   IPR009007
- InterPro:   IPR004666 [H]

Pfam domain/function: PF05618 DUF785; PF08443 RimK [H]

EC number: NA

Molecular weight: Translated: 28505; Mature: 28505

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQRILPLVAVLSLSGCALTQQAQPLASDNSETVAAIKSMETNLNTRLDTMEGKIETQNE
CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHCCCEECHHH
YISTLEKELSNVSEELSIVRSEQTKIQNSIRVATSKKKRLAPLPVSMQSQALKDTIVLGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHEEEC
IENVEIADIKQAFTARIDTGATTSSLNAVDLQEFERNGSQWVRFHLVNQDVKADDGKLEW
CCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCCCCCCEEE
ITAPVIRNVKIRQATADDAERRPVVELWIKLGAIHEKVQFTLADRSHMTHSVLLGREFIQ
EEHHHHHCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHH
DIAVVDVSKEFVQSKK
HHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIQRILPLVAVLSLSGCALTQQAQPLASDNSETVAAIKSMETNLNTRLDTMEGKIETQNE
CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHCCCEECHHH
YISTLEKELSNVSEELSIVRSEQTKIQNSIRVATSKKKRLAPLPVSMQSQALKDTIVLGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHEEEC
IENVEIADIKQAFTARIDTGATTSSLNAVDLQEFERNGSQWVRFHLVNQDVKADDGKLEW
CCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCCCCCCEEE
ITAPVIRNVKIRQATADDAERRPVVELWIKLGAIHEKVQFTLADRSHMTHSVLLGREFIQ
EEHHHHHCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHH
DIAVVDVSKEFVQSKK
HHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA