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The map label for this gene is tfoX1 [H]

Identifier: 59711503

GI number: 59711503

Start: 986000

End: 986629

Strand: Direct

Name: tfoX1 [H]

Synonym: VF_0896

Alternate gene names: 59711503

Gene position: 986000-986629 (Clockwise)

Preceding gene: 59711495

Following gene: 59711505

Centisome position: 34.03

GC content: 36.98

Gene sequence:

>630_bases
ATGACAGGGACGGGGGATGTTAATTTAAAGATCAAGGAGATCGAGATGAGTCATCTAGAAGAGCGCTTTTTTAACTTTGT
AAAAAAACTGGGAAGATTTAATAAACGTTCAATGTTTGGTGGTGTTGGATTGTTTAATGAAGATGCTATGTTCTCACTTG
TTACTGACGGACGATTATATGTTCGTGGTGGTGGTGAAGTAGATGCTCGGTTTGAAGAGTTAGGTTGTGAGCGTTTCAAG
CATGTTAAGAAGACGACAATTGCTACTGTAAATTATTTTGATGTTACTGAGTTATTTGAAAAGAAACCGGCTTCTCTTCT
TTCTATTGTTCAAGAAGCTATGGAAAATTCTCGTTTAGAAAGAGAATTTAAAAAATCAAAAGAAAACCGCCGTTTACGTG
ACTTACCAAATATGCAACTGACATTAGAAAGAATGGTCAAAAAAGCAGGAGTTCCTGATGTTGATTCATTTCTGGAAATT
GGTGCTGTTGATGTATTTAAAAAAGTGAATCACACCTATGGTGGTGATGTGGATGTTAAGCTACTTTGGAAATTTGCTGG
AGCGGAGTCAGGCGTTCATTGGACTTTATTACAAGAGCCTGCAAAGCAAGCATTATTGCAGCAAGTTTAA

Upstream 100 bases:

>100_bases
ATCGAAATAAAGAAATATACTGTTATTTCAGGTATTAATATAAAAATAATAGAAACATATTCATTGTACGTTTATTATTC
AATTGCTTGATGTCAATTTT

Downstream 100 bases:

>100_bases
ATTGTTTATTTCATAAAAAAACCTCGTTATACCGAAACAAATAAAGTTAAGGGATAACGAGGTTTTTTTGTATTTAAATA
TCTAATTTAAATTAGTATTT

Product: DNA transformation protein TfoX1 (Sxy)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 208

Protein sequence:

>209_residues
MTGTGDVNLKIKEIEMSHLEERFFNFVKKLGRFNKRSMFGGVGLFNEDAMFSLVTDGRLYVRGGGEVDARFEELGCERFK
HVKKTTIATVNYFDVTELFEKKPASLLSIVQEAMENSRLEREFKKSKENRRLRDLPNMQLTLERMVKKAGVPDVDSFLEI
GAVDVFKKVNHTYGGDVDVKLLWKFAGAESGVHWTLLQEPAKQALLQQV

Sequences:

>Translated_209_residues
MTGTGDVNLKIKEIEMSHLEERFFNFVKKLGRFNKRSMFGGVGLFNEDAMFSLVTDGRLYVRGGGEVDARFEELGCERFK
HVKKTTIATVNYFDVTELFEKKPASLLSIVQEAMENSRLEREFKKSKENRRLRDLPNMQLTLERMVKKAGVPDVDSFLEI
GAVDVFKKVNHTYGGDVDVKLLWKFAGAESGVHWTLLQEPAKQALLQQV
>Mature_208_residues
TGTGDVNLKIKEIEMSHLEERFFNFVKKLGRFNKRSMFGGVGLFNEDAMFSLVTDGRLYVRGGGEVDARFEELGCERFKH
VKKTTIATVNYFDVTELFEKKPASLLSIVQEAMENSRLEREFKKSKENRRLRDLPNMQLTLERMVKKAGVPDVDSFLEIG
AVDVFKKVNHTYGGDVDVKLLWKFAGAESGVHWTLLQEPAKQALLQQV

Specific function: Unknown

COG id: COG3070

COG function: function code K; Regulator of competence-specific genes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae DNA transformation protein tfoX [H]

Homologues:

Organism=Escherichia coli, GI1787193, Length=185, Percent_Identity=28.1081081081081, Blast_Score=71, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007077
- InterPro:   IPR007076 [H]

Pfam domain/function: PF04994 TfoX_C; PF04993 TfoX_N [H]

EC number: NA

Molecular weight: Translated: 23869; Mature: 23738

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGTGDVNLKIKEIEMSHLEERFFNFVKKLGRFNKRSMFGGVGLFNEDAMFSLVTDGRLY
CCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCEEEEEECCEEE
VRGGGEVDARFEELGCERFKHVKKTTIATVNYFDVTELFEKKPASLLSIVQEAMENSRLE
EECCCCHHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
REFKKSKENRRLRDLPNMQLTLERMVKKAGVPDVDSFLEIGAVDVFKKVNHTYGGDVDVK
HHHHHHHHCCHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHH
LLWKFAGAESGVHWTLLQEPAKQALLQQV
HHEEECCCCCCCEEHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TGTGDVNLKIKEIEMSHLEERFFNFVKKLGRFNKRSMFGGVGLFNEDAMFSLVTDGRLY
CCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCEEEEEECCEEE
VRGGGEVDARFEELGCERFKHVKKTTIATVNYFDVTELFEKKPASLLSIVQEAMENSRLE
EECCCCHHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
REFKKSKENRRLRDLPNMQLTLERMVKKAGVPDVDSFLEIGAVDVFKKVNHTYGGDVDVK
HHHHHHHHCCHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHH
LLWKFAGAESGVHWTLLQEPAKQALLQQV
HHEEECCCCCCCEEHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]