| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is feoB [H]
Identifier: 59711441
GI number: 59711441
Start: 918475
End: 920751
Strand: Direct
Name: feoB [H]
Synonym: VF_0834
Alternate gene names: 59711441
Gene position: 918475-920751 (Clockwise)
Preceding gene: 59711440
Following gene: 59711442
Centisome position: 31.7
GC content: 39.44
Gene sequence:
>2277_bases ATGCAGTATCAAGTATTAACTGTAGGTAACCCAAATAGCGGTAAAACAACGCTGTTTAATGGATTAACTGGTGCAAAGCA ACAGGTAGGTAACTGGGCGGGTGTTACGGTTGAAAAGAAAACCGGTAAATATACGTGTTCTGGTGATGAGTTTTTACTCA CTGACTTACCAGGTATCTATGCATTAGACAGTGGTAATGACGTAAACAGTTTGGATGAAACTATCGCATCACGAGCCGTG TTAACTCATGCTGCGGATGTGATTATTAATGTTGTTGATGCTTCTTGTTTAGAACGCAGCTTATACATGACATTACAACT TCGTGAGTTGGGGCGCCCAATGATCGTTGTTTTAAATAAAATGGATGTGCTTAAGCGTCAACGTCAAATTTTAGATGTAA AAGGGTTAGAAAAAGTTCTGGGTTGCCCTGTATTGTCCTTATCGGCAAATGATAAAAGCCAAGTTCATAAATTCAAAGAG AAGTTACATAAGTCAATTGCACAAGGCATTAAAATGATGCCACTTGAGCTTACTTATGGTGATGATGTTGAAGCTGCAAT TAAAGAAGCATCGGCATTATTCTCGAGTGAATATGCATCTAGTCGCTCACTGGCAATTCGTGCTTTAGAAAACGATGCTT TAGTACTTAATACACTAGAAGCCGATAAGCGAAATCAAGTAGCTAATATTACTAATGTACTCAATACAAATGTTGAAGCT GACTTTCATATTGCTGATTGTCGTTACACTTTCCTACATCAATTATGTCAGCAATTACGTCGTCAAGAAGGCCGATTAAG CCACAGTGTCAGTGAGAAAATTGACCAAGTTATTCTAAATAAGTGGGTTGGTGTTCCTTTCTTCTTTTTCGTCATGTACT TAATGTTCATGTTCTCTATCAACATTGGTAGTGCATTTATTGATTTCTTCGATATCGGTGTTGGTGCACTTCTTGTTGAT GGCGGTCATTATTTATTAGATGGTCATCTACCTGTTTGGTTAGTGACATTAATTGCTGATGGTGTCGGTGGTGGTATTCA AACCGTAGCGACCTTCATTCCTGTTATCGCTTGCCTATATTTGTTCCTTTCTTTATTAGAAAGTTCTGGTTATATGGCTC GTGCTGCATTTGTACTTGATAAAGTGATGCAAAAGATTGGATTACCAGGTAAAGCGTTTGTACCACTTGTACTTGGTTTT GGTTGTAACGTTCCAGCTATCATGGCTACTCGTACTCTAGAACAAGAGCGTGAGCGTAAATTGGCAGCGTCAATGGCTCC ATTTATGTCATGTGGTGCTCGTTTACCTGTATATGCATTGTTTGCTGCTGCTTTCTTTCCTGAAAATGGCCAAAACGTTG TATTTGGTTTGTACTTTTTCGGTATTTTAGCTGCAGTATTTACTGGTTTGTTACTGAAACATACGATTTATCCAGGACGT AGTGATTCGTTCATCATGGAAATTCCAGATTACGAATTCCCAACGATGCGTAACATCATGATCAAAACATGGCAGAAACT AAAACGTTTTGTACTTGGTGCGGGTAAAACCATCGTTGTTGTTGTAACAATATTAAGCTTCTTCAATTCACTAGGTATGG ATGGCACGTTTGGTAACGAAGACAGTGAAAACTCTGTACTTTCAAAAGCAGCTCAAGTGGTTACTCCTGTGCTTGCACCA ATTGGTATTCAAGAAGATAACTGGCCAGCAACAGTAGGTATTATCACAGGTATCTTTGCTAAAGAAGCCGTTGTTGGTAC GTTAAATAGCTTATATGCCGATCCTGCGGGCGATGATGCTGAGTTTGATTTAATGGCTAGCTTAAATGAAGCCGTAATGT CTATTCCAGATAACTTATCAGGGTTAAGCTACTCAGATCCACTAGGTGTTGAAGTGGGTGACTTAACAGATATTGAAGCG GTAGCAGAAGAGCAAGGCGTTGAGAATTCAATTTTTGGTAATCTACAAGCTCACTTTGTAACAAGTGCAAGCGCAATGGC TTACTTAATCTTCATCCTGCTTTACACTCCATGTGTTGCGGCGATGGGGGCATACATGCGTGAATTTGGTCGTAAATACT CGTACTTTATTGCTGGATGGACAATGCTACTTGCTTATGTTTCAGCAACACTGTACTACCAAATTGCTCACTTCTCAGCA GCACCGATGACAAGTGCTATGTGGATAGCTATTTCACTTATTATTATGTTAGTGACTTACCTAGTACTAAAACGTAAAGG TCAAGAAGCTCAAGAACAGCAGGCAGCATTAGTATGA
Upstream 100 bases:
>100_bases AAAGCTCCAATGGGTGACCCATTACAGATTAGCGTGAGAGGCACTTCTCTTGCTATCCGAAAGAATTTAGCTGAACAAAT TACAGTTAAGGAATTATAAA
Downstream 100 bases:
>100_bases TTTTAACCGAACTTAAGCAGTATATTGACGAACAAGGCCGTGTAGAGCGTATTGCATTAGCAAAGAAATTCAGCATGAGT GAAGATGGTGTTGATGCAAT
Product: fused ferrous iron transporter, protein B: GTP-binding protein/membrane protein
Products: Fe (II) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 758; Mature: 758
Protein sequence:
>758_residues MQYQVLTVGNPNSGKTTLFNGLTGAKQQVGNWAGVTVEKKTGKYTCSGDEFLLTDLPGIYALDSGNDVNSLDETIASRAV LTHAADVIINVVDASCLERSLYMTLQLRELGRPMIVVLNKMDVLKRQRQILDVKGLEKVLGCPVLSLSANDKSQVHKFKE KLHKSIAQGIKMMPLELTYGDDVEAAIKEASALFSSEYASSRSLAIRALENDALVLNTLEADKRNQVANITNVLNTNVEA DFHIADCRYTFLHQLCQQLRRQEGRLSHSVSEKIDQVILNKWVGVPFFFFVMYLMFMFSINIGSAFIDFFDIGVGALLVD GGHYLLDGHLPVWLVTLIADGVGGGIQTVATFIPVIACLYLFLSLLESSGYMARAAFVLDKVMQKIGLPGKAFVPLVLGF GCNVPAIMATRTLEQERERKLAASMAPFMSCGARLPVYALFAAAFFPENGQNVVFGLYFFGILAAVFTGLLLKHTIYPGR SDSFIMEIPDYEFPTMRNIMIKTWQKLKRFVLGAGKTIVVVVTILSFFNSLGMDGTFGNEDSENSVLSKAAQVVTPVLAP IGIQEDNWPATVGIITGIFAKEAVVGTLNSLYADPAGDDAEFDLMASLNEAVMSIPDNLSGLSYSDPLGVEVGDLTDIEA VAEEQGVENSIFGNLQAHFVTSASAMAYLIFILLYTPCVAAMGAYMREFGRKYSYFIAGWTMLLAYVSATLYYQIAHFSA APMTSAMWIAISLIIMLVTYLVLKRKGQEAQEQQAALV
Sequences:
>Translated_758_residues MQYQVLTVGNPNSGKTTLFNGLTGAKQQVGNWAGVTVEKKTGKYTCSGDEFLLTDLPGIYALDSGNDVNSLDETIASRAV LTHAADVIINVVDASCLERSLYMTLQLRELGRPMIVVLNKMDVLKRQRQILDVKGLEKVLGCPVLSLSANDKSQVHKFKE KLHKSIAQGIKMMPLELTYGDDVEAAIKEASALFSSEYASSRSLAIRALENDALVLNTLEADKRNQVANITNVLNTNVEA DFHIADCRYTFLHQLCQQLRRQEGRLSHSVSEKIDQVILNKWVGVPFFFFVMYLMFMFSINIGSAFIDFFDIGVGALLVD GGHYLLDGHLPVWLVTLIADGVGGGIQTVATFIPVIACLYLFLSLLESSGYMARAAFVLDKVMQKIGLPGKAFVPLVLGF GCNVPAIMATRTLEQERERKLAASMAPFMSCGARLPVYALFAAAFFPENGQNVVFGLYFFGILAAVFTGLLLKHTIYPGR SDSFIMEIPDYEFPTMRNIMIKTWQKLKRFVLGAGKTIVVVVTILSFFNSLGMDGTFGNEDSENSVLSKAAQVVTPVLAP IGIQEDNWPATVGIITGIFAKEAVVGTLNSLYADPAGDDAEFDLMASLNEAVMSIPDNLSGLSYSDPLGVEVGDLTDIEA VAEEQGVENSIFGNLQAHFVTSASAMAYLIFILLYTPCVAAMGAYMREFGRKYSYFIAGWTMLLAYVSATLYYQIAHFSA APMTSAMWIAISLIIMLVTYLVLKRKGQEAQEQQAALV >Mature_758_residues MQYQVLTVGNPNSGKTTLFNGLTGAKQQVGNWAGVTVEKKTGKYTCSGDEFLLTDLPGIYALDSGNDVNSLDETIASRAV LTHAADVIINVVDASCLERSLYMTLQLRELGRPMIVVLNKMDVLKRQRQILDVKGLEKVLGCPVLSLSANDKSQVHKFKE KLHKSIAQGIKMMPLELTYGDDVEAAIKEASALFSSEYASSRSLAIRALENDALVLNTLEADKRNQVANITNVLNTNVEA DFHIADCRYTFLHQLCQQLRRQEGRLSHSVSEKIDQVILNKWVGVPFFFFVMYLMFMFSINIGSAFIDFFDIGVGALLVD GGHYLLDGHLPVWLVTLIADGVGGGIQTVATFIPVIACLYLFLSLLESSGYMARAAFVLDKVMQKIGLPGKAFVPLVLGF GCNVPAIMATRTLEQERERKLAASMAPFMSCGARLPVYALFAAAFFPENGQNVVFGLYFFGILAAVFTGLLLKHTIYPGR SDSFIMEIPDYEFPTMRNIMIKTWQKLKRFVLGAGKTIVVVVTILSFFNSLGMDGTFGNEDSENSVLSKAAQVVTPVLAP IGIQEDNWPATVGIITGIFAKEAVVGTLNSLYADPAGDDAEFDLMASLNEAVMSIPDNLSGLSYSDPLGVEVGDLTDIEA VAEEQGVENSIFGNLQAHFVTSASAMAYLIFILLYTPCVAAMGAYMREFGRKYSYFIAGWTMLLAYVSATLYYQIAHFSA APMTSAMWIAISLIIMLVTYLVLKRKGQEAQEQQAALV
Specific function: Fe(2+) uptake system, probably driven by GTP [H]
COG id: COG0370
COG function: function code P; Fe2+ transport system protein B
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the feoB (TC 9.A.8) family [H]
Homologues:
Organism=Escherichia coli, GI1789813, Length=753, Percent_Identity=42.6294820717131, Blast_Score=557, Evalue=1e-160,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003373 - InterPro: IPR011640 - InterPro: IPR011619 - InterPro: IPR011642 - InterPro: IPR006073 [H]
Pfam domain/function: PF07664 FeoB_C; PF02421 FeoB_N; PF07670 Gate [H]
EC number: NA
Molecular weight: Translated: 82943; Mature: 82943
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQYQVLTVGNPNSGKTTLFNGLTGAKQQVGNWAGVTVEKKTGKYTCSGDEFLLTDLPGIY CCEEEEEECCCCCCCEEEECCCCHHHHHCCCCCCEEEECCCCCEEECCCCEEEECCCCEE ALDSGNDVNSLDETIASRAVLTHAADVIINVVDASCLERSLYMTLQLRELGRPMIVVLNK EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHH MDVLKRQRQILDVKGLEKVLGCPVLSLSANDKSQVHKFKEKLHKSIAQGIKMMPLELTYG HHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEECEEEEECC DDVEAAIKEASALFSSEYASSRSLAIRALENDALVLNTLEADKRNQVANITNVLNTNVEA CCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEECCCCHHHHHHHHHHHHCCCCCC DFHIADCRYTFLHQLCQQLRRQEGRLSHSVSEKIDQVILNKWVGVPFFFFVMYLMFMFSI CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH NIGSAFIDFFDIGVGALLVDGGHYLLDGHLPVWLVTLIADGVGGGIQTVATFIPVIACLY HHHHHHHHHHHHCCCEEEEECCCEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH LFLSLLESSGYMARAAFVLDKVMQKIGLPGKAFVPLVLGFGCNVPAIMATRTLEQERERK HHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHH LAASMAPFMSCGARLPVYALFAAAFFPENGQNVVFGLYFFGILAAVFTGLLLKHTIYPGR HHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC SDSFIMEIPDYEFPTMRNIMIKTWQKLKRFVLGAGKTIVVVVTILSFFNSLGMDGTFGNE CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCC DSENSVLSKAAQVVTPVLAPIGIQEDNWPATVGIITGIFAKEAVVGTLNSLYADPAGDDA CCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC EFDLMASLNEAVMSIPDNLSGLSYSDPLGVEVGDLTDIEAVAEEQGVENSIFGNLQAHFV CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHCCCHHHHH TSASAMAYLIFILLYTPCVAAMGAYMREFGRKYSYFIAGWTMLLAYVSATLYYQIAHFSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC APMTSAMWIAISLIIMLVTYLVLKRKGQEAQEQQAALV CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCC >Mature Secondary Structure MQYQVLTVGNPNSGKTTLFNGLTGAKQQVGNWAGVTVEKKTGKYTCSGDEFLLTDLPGIY CCEEEEEECCCCCCCEEEECCCCHHHHHCCCCCCEEEECCCCCEEECCCCEEEECCCCEE ALDSGNDVNSLDETIASRAVLTHAADVIINVVDASCLERSLYMTLQLRELGRPMIVVLNK EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHH MDVLKRQRQILDVKGLEKVLGCPVLSLSANDKSQVHKFKEKLHKSIAQGIKMMPLELTYG HHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEECEEEEECC DDVEAAIKEASALFSSEYASSRSLAIRALENDALVLNTLEADKRNQVANITNVLNTNVEA CCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEECCCCHHHHHHHHHHHHCCCCCC DFHIADCRYTFLHQLCQQLRRQEGRLSHSVSEKIDQVILNKWVGVPFFFFVMYLMFMFSI CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH NIGSAFIDFFDIGVGALLVDGGHYLLDGHLPVWLVTLIADGVGGGIQTVATFIPVIACLY HHHHHHHHHHHHCCCEEEEECCCEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH LFLSLLESSGYMARAAFVLDKVMQKIGLPGKAFVPLVLGFGCNVPAIMATRTLEQERERK HHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHH LAASMAPFMSCGARLPVYALFAAAFFPENGQNVVFGLYFFGILAAVFTGLLLKHTIYPGR HHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC SDSFIMEIPDYEFPTMRNIMIKTWQKLKRFVLGAGKTIVVVVTILSFFNSLGMDGTFGNE CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCC DSENSVLSKAAQVVTPVLAPIGIQEDNWPATVGIITGIFAKEAVVGTLNSLYADPAGDDA CCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC EFDLMASLNEAVMSIPDNLSGLSYSDPLGVEVGDLTDIEAVAEEQGVENSIFGNLQAHFV CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHCCCHHHHH TSASAMAYLIFILLYTPCVAAMGAYMREFGRKYSYFIAGWTMLLAYVSATLYYQIAHFSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC APMTSAMWIAISLIIMLVTYLVLKRKGQEAQEQQAALV CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Fe (II) [Periplasm] [C]
Specific reaction: Fe (II) [Periplasm] = Fe (II) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA