Click here to switch to the map view.

The map label for this gene is nqrC [H]

Identifier: 59711334

GI number: 59711334

Start: 794315

End: 795082

Strand: Direct

Name: nqrC [H]

Synonym: VF_0727

Alternate gene names: 59711334

Gene position: 794315-795082 (Clockwise)

Preceding gene: 59711333

Following gene: 59711335

Centisome position: 27.41

GC content: 42.71

Gene sequence:

>768_bases
ATGGCAAGTAATAACGATAGCATTAAAAAGACTCTCGGTGTTGTTATTGGTTTGAGCCTAGTGTGTTCAATCATCGTATC
AACGGCGGCAGTTGGTCTGCGTGATAAGCAAAAAGCAAACGCAGTTCTAGATAAGCAAAGCAAAATTGTTGAAGTTGCAG
GTGTTACAGGTTCAGGTACTGTTCCTGAACTATTCGCTGCAAACATCGAACCTCGTCTTGTTGATTTTGCAACAGGTGAG
TTCGTTGATGGTGACGCAGCTACTTACGATCAACGTAAAGCAGCTAAAGATCCAAAACAATCAATTAAGCTAACAGCTGA
GCAAGATAAAGCAAAAATCATTCGTCGTGCAAACTTAGGTGTTGTTTACCTAGTTAAAGATGGCGACAAAGTGACTAAAA
TTATCCTACCTGTTCACGGTACTGGATTATGGTCAATGATGTATGCGTTTGTTGCAGTTGAGACTGATGGTAACACTATT
GCGGGTATCACTTACTACGACCAAGCGGAAACTCCGGGACTTGGTGGTGAAGTTGAAAACCCAACGTGGCGTGCACAATT
CGTAGGTAAGAAACTGTTTGATGAAAATCATAAACCTGCAATTAAGATCGTTAAAGGCGGTGCTCCAGCTGGTTCTGAGT
ACGGTGTAGATGGTCTTTCTGGTGCAACGCTAACAGGTAACGGTGTTCAACACACGTTTGACTTCTGGTTAGGTAATGAT
GGCTTCGGTCCATTCCTTGCTAAAGTTCGTGATGGAGGTCTGAACTAA

Upstream 100 bases:

>100_bases
CCTGAAGGTATGATGTTAGCTATTCTATTTGCAAACTTGTTTGCTCCATTGTTTGATAACCTTGTAGTTGAAGGTAACGT
GAAACGGAGACTAAAACGCT

Downstream 100 bases:

>100_bases
TGGCTAGCGCAAAAGATATTAAAAAGAGCATTTTAGCGCCGGTGTTGGATAACAACCCTATCGCGCTACAAGTTCTTGGT
GTTTGTTCAGCTCTAGCTGT

Product: Na(+)-translocating NADH-quinone reductase subunit C

Products: NA

Alternate protein names: Na(+)-NQR subunit C; Na(+)-translocating NQR subunit C; NQR complex subunit C; NQR-1 subunit C [H]

Number of amino acids: Translated: 255; Mature: 254

Protein sequence:

>255_residues
MASNNDSIKKTLGVVIGLSLVCSIIVSTAAVGLRDKQKANAVLDKQSKIVEVAGVTGSGTVPELFAANIEPRLVDFATGE
FVDGDAATYDQRKAAKDPKQSIKLTAEQDKAKIIRRANLGVVYLVKDGDKVTKIILPVHGTGLWSMMYAFVAVETDGNTI
AGITYYDQAETPGLGGEVENPTWRAQFVGKKLFDENHKPAIKIVKGGAPAGSEYGVDGLSGATLTGNGVQHTFDFWLGND
GFGPFLAKVRDGGLN

Sequences:

>Translated_255_residues
MASNNDSIKKTLGVVIGLSLVCSIIVSTAAVGLRDKQKANAVLDKQSKIVEVAGVTGSGTVPELFAANIEPRLVDFATGE
FVDGDAATYDQRKAAKDPKQSIKLTAEQDKAKIIRRANLGVVYLVKDGDKVTKIILPVHGTGLWSMMYAFVAVETDGNTI
AGITYYDQAETPGLGGEVENPTWRAQFVGKKLFDENHKPAIKIVKGGAPAGSEYGVDGLSGATLTGNGVQHTFDFWLGND
GFGPFLAKVRDGGLN
>Mature_254_residues
ASNNDSIKKTLGVVIGLSLVCSIIVSTAAVGLRDKQKANAVLDKQSKIVEVAGVTGSGTVPELFAANIEPRLVDFATGEF
VDGDAATYDQRKAAKDPKQSIKLTAEQDKAKIIRRANLGVVYLVKDGDKVTKIILPVHGTGLWSMMYAFVAVETDGNTIA
GITYYDQAETPGLGGEVENPTWRAQFVGKKLFDENHKPAIKIVKGGAPAGSEYGVDGLSGATLTGNGVQHTFDFWLGNDG
FGPFLAKVRDGGLN

Specific function: NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to nqrE are probably involved in the second step, the conversion of ubisemiqui

COG id: COG2869

COG function: function code C; Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC

Gene ontology:

Cell location: Cell inner membrane (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nqrC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007329
- InterPro:   IPR010204 [H]

Pfam domain/function: PF04205 FMN_bind [H]

EC number: NA

Molecular weight: Translated: 26986; Mature: 26855

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASNNDSIKKTLGVVIGLSLVCSIIVSTAAVGLRDKQKANAVLDKQSKIVEVAGVTGSGT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEECCCCCCC
VPELFAANIEPRLVDFATGEFVDGDAATYDQRKAAKDPKQSIKLTAEQDKAKIIRRANLG
CHHHHHCCCCCEEEEEECCCEECCCCCCCHHHHHCCCCHHHEEEEECHHHHHHHHHCCCC
VVYLVKDGDKVTKIILPVHGTGLWSMMYAFVAVETDGNTIAGITYYDQAETPGLGGEVEN
EEEEEECCCCEEEEEEEECCCCHHHHHHHHEEEECCCCEEEEEEEECCCCCCCCCCCCCC
PTWRAQFVGKKLFDENHKPAIKIVKGGAPAGSEYGVDGLSGATLTGNGVQHTFDFWLGND
CEEHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEECCCCCEEEEEEECCC
GFGPFLAKVRDGGLN
CCCHHHHHHHCCCCC
>Mature Secondary Structure 
ASNNDSIKKTLGVVIGLSLVCSIIVSTAAVGLRDKQKANAVLDKQSKIVEVAGVTGSGT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEECCCCCCC
VPELFAANIEPRLVDFATGEFVDGDAATYDQRKAAKDPKQSIKLTAEQDKAKIIRRANLG
CHHHHHCCCCCEEEEEECCCEECCCCCCCHHHHHCCCCHHHEEEEECHHHHHHHHHCCCC
VVYLVKDGDKVTKIILPVHGTGLWSMMYAFVAVETDGNTIAGITYYDQAETPGLGGEVEN
EEEEEECCCCEEEEEEEECCCCHHHHHHHHEEEECCCCEEEEEEEECCCCCCCCCCCCCC
PTWRAQFVGKKLFDENHKPAIKIVKGGAPAGSEYGVDGLSGATLTGNGVQHTFDFWLGND
CEEHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEECCCCCEEEEEEECCC
GFGPFLAKVRDGGLN
CCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA