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The map label for this gene is motA1 [H]

Identifier: 59711321

GI number: 59711321

Start: 781178

End: 781942

Strand: Direct

Name: motA1 [H]

Synonym: VF_0714

Alternate gene names: 59711321

Gene position: 781178-781942 (Clockwise)

Preceding gene: 59711317

Following gene: 59711322

Centisome position: 26.96

GC content: 36.6

Gene sequence:

>765_bases
GTGGATTTAGCAACGTTAATAGGCTTAGTTGGTAGTTTTGCATTTATTATTATGGCAATGGTACTGGCTGGTGGTTTAGC
CATTTTTATGGACACAACATCGGTTTTAATCGTAGTTGGTGGTTCAATTTTTGTTGTTTTAATGAAATTTACCGTAGGCC
AATTTTTTGGCGCTGGTAAAATTGCAGGTAAAGCATTTATTTTTAAAACAGATGAACCTGTTGATCTTATTGTAACTATT
GTTGAAATGGCTGATGCGGCTCGTAAAGGCGGTTTCTTAGCATTAGAAGAAAAAGAAATCAGTAACTCTTTTATGCAAAA
AGGTATTGATTTATTGGTTGATGGTCATGATGCTGAAGTTGTGAAAGCAACATTACAAAAAGACATCGCATTAACGAATG
AACGTCATGAACGTGGTGTTGGTGTATTTACCGCTTTTGGTGACGTAGCTCCTGCAATGGGTATGATTGGTACCTTAGTT
GGTCTAGTAGGTATGTTATCAAACATGGATGATCCTAAATCTATCGGTCCTGCAATGGCGGTTGCGCTATTAACAACACT
ATATGGTTCGGTAATTTCAAACATGGTTGCATTCCCTATTGCTCATAAACTTGAATTACGTAAAGAACAAGAAAAATTGA
ATCGCCGTTTAATTCTTGATGGCATTTTGGCGATTCAAGATGGTCAAAACCCACGTGTTATTGATAGCTACTTACGTAAC
TATTTAAATGAGAAAAAACGTGTTGTTGACACTGGCGAAGAATAA

Upstream 100 bases:

>100_bases
TCGATAAGAAATAAGCGGCAAAAAAGCGATACAATTTTATGGCTTAAATTTTGCTTAGCACTTTGTAAGTAAACACAAGC
AGCATATAGGGGAGCGCTCT

Downstream 100 bases:

>100_bases
GACTGGGAGTCACTAATGGAAGATGAAAACGACTGCAAATGTCCTCCTGGTGCCCCCTTATGGATGGCAACATTTGCTGA
CTTAGCAACATTATTAATGT

Product: flagellar motor protein PomA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MDLATLIGLVGSFAFIIMAMVLAGGLAIFMDTTSVLIVVGGSIFVVLMKFTVGQFFGAGKIAGKAFIFKTDEPVDLIVTI
VEMADAARKGGFLALEEKEISNSFMQKGIDLLVDGHDAEVVKATLQKDIALTNERHERGVGVFTAFGDVAPAMGMIGTLV
GLVGMLSNMDDPKSIGPAMAVALLTTLYGSVISNMVAFPIAHKLELRKEQEKLNRRLILDGILAIQDGQNPRVIDSYLRN
YLNEKKRVVDTGEE

Sequences:

>Translated_254_residues
MDLATLIGLVGSFAFIIMAMVLAGGLAIFMDTTSVLIVVGGSIFVVLMKFTVGQFFGAGKIAGKAFIFKTDEPVDLIVTI
VEMADAARKGGFLALEEKEISNSFMQKGIDLLVDGHDAEVVKATLQKDIALTNERHERGVGVFTAFGDVAPAMGMIGTLV
GLVGMLSNMDDPKSIGPAMAVALLTTLYGSVISNMVAFPIAHKLELRKEQEKLNRRLILDGILAIQDGQNPRVIDSYLRN
YLNEKKRVVDTGEE
>Mature_254_residues
MDLATLIGLVGSFAFIIMAMVLAGGLAIFMDTTSVLIVVGGSIFVVLMKFTVGQFFGAGKIAGKAFIFKTDEPVDLIVTI
VEMADAARKGGFLALEEKEISNSFMQKGIDLLVDGHDAEVVKATLQKDIALTNERHERGVGVFTAFGDVAPAMGMIGTLV
GLVGMLSNMDDPKSIGPAMAVALLTTLYGSVISNMVAFPIAHKLELRKEQEKLNRRLILDGILAIQDGQNPRVIDSYLRN
YLNEKKRVVDTGEE

Specific function: PomA and PomB comprise the stator element of the flagellar motor complex. Required for rotation of the flagellar motor. Probable transmembrane proton channel [H]

COG id: COG1291

COG function: function code N; Flagellar motor component

Gene ontology:

Cell location: Cell inner membrane; Multi- pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MotA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000540
- InterPro:   IPR002898 [H]

Pfam domain/function: PF01618 MotA_ExbB [H]

EC number: NA

Molecular weight: Translated: 27325; Mature: 27325

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: PS01307 MOTA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLATLIGLVGSFAFIIMAMVLAGGLAIFMDTTSVLIVVGGSIFVVLMKFTVGQFFGAGK
CCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHEEEEECHHHHHHHHHHHHHHHHCCCH
IAGKAFIFKTDEPVDLIVTIVEMADAARKGGFLALEEKEISNSFMQKGIDLLVDGHDAEV
HCCCEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCCCEEECCCCHHH
VKATLQKDIALTNERHERGVGVFTAFGDVAPAMGMIGTLVGLVGMLSNMDDPKSIGPAMA
HHHHHHHHHHHCCCHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
VALLTTLYGSVISNMVAFPIAHKLELRKEQEKLNRRLILDGILAIQDGQNPRVIDSYLRN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHH
YLNEKKRVVDTGEE
HHHHHHHHCCCCCC
>Mature Secondary Structure
MDLATLIGLVGSFAFIIMAMVLAGGLAIFMDTTSVLIVVGGSIFVVLMKFTVGQFFGAGK
CCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHEEEEECHHHHHHHHHHHHHHHHCCCH
IAGKAFIFKTDEPVDLIVTIVEMADAARKGGFLALEEKEISNSFMQKGIDLLVDGHDAEV
HCCCEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCCCEEECCCCHHH
VKATLQKDIALTNERHERGVGVFTAFGDVAPAMGMIGTLVGLVGMLSNMDDPKSIGPAMA
HHHHHHHHHHHCCCHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
VALLTTLYGSVISNMVAFPIAHKLELRKEQEKLNRRLILDGILAIQDGQNPRVIDSYLRN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHH
YLNEKKRVVDTGEE
HHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9260952 [H]