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The map label for this gene is yhcH [C]

Identifier: 59711276

GI number: 59711276

Start: 733329

End: 733799

Strand: Direct

Name: yhcH [C]

Synonym: VF_0669

Alternate gene names: 59711276

Gene position: 733329-733799 (Clockwise)

Preceding gene: 59711275

Following gene: 59711294

Centisome position: 25.31

GC content: 35.67

Gene sequence:

>471_bases
ATGATTTATGGTCATATTGAGCACCAAAAAACAAATCAGTATTTACCACGTGTTATTCAACAGTGTTTGGCGTATTTAAA
TGAAACAGATTTAGAAGCATTGCCAACAGGAAAACACATTATTGATGGTGAGAACATTTTTGCTAATGTCATGGAGTTTG
AAACGGGTGATGCAAGCAGCAAACAGGCTGAAGTGCATAAAGAATACGTTGATGTGCAGTGCTTAATTCGTGGTGAAGAG
CGTATCCAATATTCATTAGAAGATGAGGTTAACCCAATAGCTAAACCTTATGATGAAGAAAATGATTTTTACTTAGTTGA
AAGTATGAATCAATGTAATGACGTGATTATGCATCCTAAAATGTTTGCCGTGTTCTTACCTGAAGAACCGCATAAACCGG
GGTGTATTGTGTCTCAATCTGGATTGATTAAGAAGATAGTGATTAAAGTTCACCGTAGTTTGTTAGCTTAA

Upstream 100 bases:

>100_bases
AGTGCAACAAAAGAAAAGCGTTCAACCACTGCTGAAAAAGCGTAATTGATAATTGAGTTTGAGCCTTTGTTTTTATAAAG
GCTCTTTTAAGGACAGTGTT

Downstream 100 bases:

>100_bases
TTAATTGAAAATAAAAGCCCTGATACGTACTTAGTTATGGCATAAGTAGTATCAGGGCTTTGTCTTATTTTAGGAAGGTT
TATATTGATGCTTGTTTATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MIYGHIEHQKTNQYLPRVIQQCLAYLNETDLEALPTGKHIIDGENIFANVMEFETGDASSKQAEVHKEYVDVQCLIRGEE
RIQYSLEDEVNPIAKPYDEENDFYLVESMNQCNDVIMHPKMFAVFLPEEPHKPGCIVSQSGLIKKIVIKVHRSLLA

Sequences:

>Translated_156_residues
MIYGHIEHQKTNQYLPRVIQQCLAYLNETDLEALPTGKHIIDGENIFANVMEFETGDASSKQAEVHKEYVDVQCLIRGEE
RIQYSLEDEVNPIAKPYDEENDFYLVESMNQCNDVIMHPKMFAVFLPEEPHKPGCIVSQSGLIKKIVIKVHRSLLA
>Mature_156_residues
MIYGHIEHQKTNQYLPRVIQQCLAYLNETDLEALPTGKHIIDGENIFANVMEFETGDASSKQAEVHKEYVDVQCLIRGEE
RIQYSLEDEVNPIAKPYDEENDFYLVESMNQCNDVIMHPKMFAVFLPEEPHKPGCIVSQSGLIKKIVIKVHRSLLA

Specific function: Unknown

COG id: COG2731

COG function: function code G; Beta-galactosidase, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yhcH [H]

Homologues:

Organism=Escherichia coli, GI1790001, Length=155, Percent_Identity=34.1935483870968, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1789615, Length=120, Percent_Identity=42.5, Blast_Score=99, Evalue=1e-22,
Organism=Escherichia coli, GI87082398, Length=150, Percent_Identity=28.6666666666667, Blast_Score=74, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004375 [H]

Pfam domain/function: PF04074 DUF386 [H]

EC number: NA

Molecular weight: Translated: 17904; Mature: 17904

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYGHIEHQKTNQYLPRVIQQCLAYLNETDLEALPTGKHIIDGENIFANVMEFETGDASS
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHHHHCCCCCCCC
KQAEVHKEYVDVQCLIRGEERIQYSLEDEVNPIAKPYDEENDFYLVESMNQCNDVIMHPK
HHHHHHHHHHHHHEEEECHHHEEECCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHCCCC
MFAVFLPEEPHKPGCIVSQSGLIKKIVIKVHRSLLA
EEEEECCCCCCCCCEEEECCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIYGHIEHQKTNQYLPRVIQQCLAYLNETDLEALPTGKHIIDGENIFANVMEFETGDASS
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHHHHCCCCCCCC
KQAEVHKEYVDVQCLIRGEERIQYSLEDEVNPIAKPYDEENDFYLVESMNQCNDVIMHPK
HHHHHHHHHHHHHEEEECHHHEEECCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHCCCC
MFAVFLPEEPHKPGCIVSQSGLIKKIVIKVHRSLLA
EEEEECCCCCCCCCEEEECCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 9719565; 10675023 [H]