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The map label for this gene is brnQ [H]

Identifier: 59711053

GI number: 59711053

Start: 475331

End: 476644

Strand: Direct

Name: brnQ [H]

Synonym: VF_0446

Alternate gene names: 59711053

Gene position: 475331-476644 (Clockwise)

Preceding gene: 59711050

Following gene: 59711055

Centisome position: 16.4

GC content: 39.57

Gene sequence:

>1314_bases
GTGAAACAGTCATTAAAACTAGCCGATATCATTGCCGTTGGCTTTATGCTTTTTGCCTTTTTCTTAGGCGCAGGCAATAT
TATTTTCCCACCAATTGCTGGCCAAATGGCTGGTGAGCACGTTTTTGGTGCAATGAGTGGATTTTTAATCACAGCTGTTG
GTTTACCATTATTAACTATCATTGCTATTGGTGTCTCTGGTGGTTCTTGGCAGCACCTAACACGTGACCTACCTCCTAAA
GTAGCAATGATAATGGCAATTTTAATGTTTGTTATTATTGGCCCTGCTTTTGCTGCCCCTCGAACAGGTTTGGTTGCATA
TGAAATGGCAGCGAAACCATTTATCGGAGCGGATGCAGGTCAATTTTCACTGACTCTATTTTCAATTGTATTCTTCTCTA
TCGCAATGTTTTTTGCATGGTCTCAAGGTAAATTGATTGACACTATTGGTAAGTTTTTAACGCCAGCATTGTTCATTGGT
TTAATTGTGCTTGCTATTGCTGTATTCGTTAATCCTCAAGGTGATATTGTTGCTGCTACAGGTAAGTATGTTGATAGCCC
TCTAACAACAGGATTTTTTGAAGGTTACAATACAATGGATACGTTTGGTGCCTTGATGTTTGGTATTTTGATCATCGATG
CATTGAAGAGCAAAGGTATTACAGAACATAAAGCGACAACTAAATATTTAACGATTGCTGGTTTAATTGCGGCATCGGGC
TTAGCTTTTGTGTACGTATCATTATTCTACTTAGGTGCAACGTCTAGTACGGTTGCAGCAGGGGCTGATAATGGTGGGGC
AATACTAACAGCTTATACTCATGCATTGTTTGGTACCTCTGGGCAGACGGTATTATCTGTTATTGTATTAATTGCTTGTC
TAACAACGGCTATTGGTCTGATTTCAGCTTGCGCAGATTACTTTAGCTCAATCTGTAAAGTGACATATAAGTCTTGGGTT
ATTATTGTTGGTGTAGCATGTGCGGTAGTTGCTAATGTTGGATTAACTCAGCTAATTACGCTTTCGGTTCCTGTATTATT
CTTACTTTACCCGGTAGCAATTGCATTAGTTGTGTTGGCTTTCATTCGTAAAATGATGCCAAATCCACAATTAGCTTATC
GTGTCGTTATTTCTGTTGCGACGTGTTTTGCGATATTAGATGCTGCGAAAGTTGCTGGTGCGGATATGTCTGCTTTCTCA
ATGCTACCAATGTTTGACCATGGTATGGCTTGGGTGATTCCAACATTTGCTTCGATGATCATTGTTCGTTTTGTCGGTAA
GAAAGAAGACGAATTAGTGACTGAAAATGCATAA

Upstream 100 bases:

>100_bases
TGCGAACTTGTGATAATTTGTTCATTATTCTGGAAGATATATCATATATAGATATAAAACATAAAATTAAATACACACAA
CATTATACAAGGGTTTTATT

Downstream 100 bases:

>100_bases
TTCTAGGGACTAGGGACTAGGGACTAGAGATTACAAGAGCGAGTATAACTGTTTAAGTTCACTCGCTCTTTTCTTTTATA
GTAACGCAGTGTCTAGTTAG

Product: branched chain amino acid ABC transporter

Products: L-leucine [Cytoplasm]; L-valine [Cytoplasm]; Na (I) [Cytoplasm]; L-iso-leucine [Cytoplasm] [C]

Alternate protein names: LIV-II [H]

Number of amino acids: Translated: 437; Mature: 437

Protein sequence:

>437_residues
MKQSLKLADIIAVGFMLFAFFLGAGNIIFPPIAGQMAGEHVFGAMSGFLITAVGLPLLTIIAIGVSGGSWQHLTRDLPPK
VAMIMAILMFVIIGPAFAAPRTGLVAYEMAAKPFIGADAGQFSLTLFSIVFFSIAMFFAWSQGKLIDTIGKFLTPALFIG
LIVLAIAVFVNPQGDIVAATGKYVDSPLTTGFFEGYNTMDTFGALMFGILIIDALKSKGITEHKATTKYLTIAGLIAASG
LAFVYVSLFYLGATSSTVAAGADNGGAILTAYTHALFGTSGQTVLSVIVLIACLTTAIGLISACADYFSSICKVTYKSWV
IIVGVACAVVANVGLTQLITLSVPVLFLLYPVAIALVVLAFIRKMMPNPQLAYRVVISVATCFAILDAAKVAGADMSAFS
MLPMFDHGMAWVIPTFASMIIVRFVGKKEDELVTENA

Sequences:

>Translated_437_residues
MKQSLKLADIIAVGFMLFAFFLGAGNIIFPPIAGQMAGEHVFGAMSGFLITAVGLPLLTIIAIGVSGGSWQHLTRDLPPK
VAMIMAILMFVIIGPAFAAPRTGLVAYEMAAKPFIGADAGQFSLTLFSIVFFSIAMFFAWSQGKLIDTIGKFLTPALFIG
LIVLAIAVFVNPQGDIVAATGKYVDSPLTTGFFEGYNTMDTFGALMFGILIIDALKSKGITEHKATTKYLTIAGLIAASG
LAFVYVSLFYLGATSSTVAAGADNGGAILTAYTHALFGTSGQTVLSVIVLIACLTTAIGLISACADYFSSICKVTYKSWV
IIVGVACAVVANVGLTQLITLSVPVLFLLYPVAIALVVLAFIRKMMPNPQLAYRVVISVATCFAILDAAKVAGADMSAFS
MLPMFDHGMAWVIPTFASMIIVRFVGKKEDELVTENA
>Mature_437_residues
MKQSLKLADIIAVGFMLFAFFLGAGNIIFPPIAGQMAGEHVFGAMSGFLITAVGLPLLTIIAIGVSGGSWQHLTRDLPPK
VAMIMAILMFVIIGPAFAAPRTGLVAYEMAAKPFIGADAGQFSLTLFSIVFFSIAMFFAWSQGKLIDTIGKFLTPALFIG
LIVLAIAVFVNPQGDIVAATGKYVDSPLTTGFFEGYNTMDTFGALMFGILIIDALKSKGITEHKATTKYLTIAGLIAASG
LAFVYVSLFYLGATSSTVAAGADNGGAILTAYTHALFGTSGQTVLSVIVLIACLTTAIGLISACADYFSSICKVTYKSWV
IIVGVACAVVANVGLTQLITLSVPVLFLLYPVAIALVVLAFIRKMMPNPQLAYRVVISVATCFAILDAAKVAGADMSAFS
MLPMFDHGMAWVIPTFASMIIVRFVGKKEDELVTENA

Specific function: Component of the LIV-II transport system for branched- chain amino acids. BraB is specific for isoleucine, leucine and valine. The LIV-II transport system is coupled to sodium and lithium ions [H]

COG id: COG1114

COG function: function code E; Branched-chain amino acid permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the branched chain amino acid transporter family [H]

Homologues:

Organism=Escherichia coli, GI1786601, Length=440, Percent_Identity=41.5909090909091, Blast_Score=335, Evalue=5e-93,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004685 [H]

Pfam domain/function: PF05525 Branch_AA_trans [H]

EC number: NA

Molecular weight: Translated: 46025; Mature: 46025

Theoretical pI: Translated: 7.88; Mature: 7.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHCCCCCCCCCCCC
>Mature Secondary Structure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HHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: L-leucine [Periplasm]; L-valine [Periplasm]; Na (I) [Periplasm]; L-iso-leucine [Periplasm] [C]

Specific reaction: Na (I) [Periplasm] + L-leucine [Periplasm] = Na (I) [Cytoplasm] + L-leucine [Cytoplasm] Na (I) [Periplasm] + L-valine [Periplasm] = Na (I) [Cytoplasm] + L-valine [Cytoplasm] Na (I) [Periplasm] + L-iso-leucine [Periplasm] = Na (I) [Cytoplasm] + L-iso-leuci

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2111004; 10984043 [H]