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The map label for this gene is 59711023

Identifier: 59711023

GI number: 59711023

Start: 446800

End: 447276

Strand: Reverse

Name: 59711023

Synonym: VF_0416

Alternate gene names: NA

Gene position: 447276-446800 (Counterclockwise)

Preceding gene: 59711024

Following gene: 59711020

Centisome position: 15.44

GC content: 41.51

Gene sequence:

>477_bases
ATGGAAGAAAAAATGAACACTCAAAAACAAGCTGGCTTTATGCGCCGAATGGGAGCATGGTTTTACGATACCTTAATCAT
TAGTGCTGTGATGATGTTAACTGGTGGCGCTATCGTGGCGACGCTTGAAATGCTTTATGGCGCAGGCATTATTAGTTACG
GTGAATTTCCAGATGTGAGTTCTTATCTCAATCACGACCCACTATGGCGTAACCTTTACCCTGTTACTCTTGTTTCTGTT
TTCGTTGGCTTCTTTGCTTACTTTTGGTGTAAAGGCCAAACTCTTGGAATGCGAGCATGGAAACTACAAGTACAACAACT
TGATGGATCCCCTATCACACTAACCCAAGCTATTATCCGTATGTCCACATCGGCATTTGGTTTAGGCAACTTATTAGTAT
TTATCTCTCACGATAACTCCGCCTTCCAAGATACATGGGCAAAAACTCGCGTTATTGTTTTAGATAAAGCGATTTAG

Upstream 100 bases:

>100_bases
ACTCTTAGTTTTTTGTTTGCTGAAATAAGCAGCACTTATTTACAATCTGATTTTCATTTTTTCCCTCACAGTCGTTATAC
TGCTGTCAGTTTTTTAATTT

Downstream 100 bases:

>100_bases
TATTAAGTACCAAAATTAAATACAAAAAAAGGAGATACATTTTAAATGCATCTCCTTTTTATTTAATTAAATATTATAAT
TTTCTATTTAATAAACCGAC

Product: proline-rich antigen

Products: NA

Alternate protein names: Proline-Rich Antigen; RDD Domain Containing Protein; RDD Domain Protein

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MEEKMNTQKQAGFMRRMGAWFYDTLIISAVMMLTGGAIVATLEMLYGAGIISYGEFPDVSSYLNHDPLWRNLYPVTLVSV
FVGFFAYFWCKGQTLGMRAWKLQVQQLDGSPITLTQAIIRMSTSAFGLGNLLVFISHDNSAFQDTWAKTRVIVLDKAI

Sequences:

>Translated_158_residues
MEEKMNTQKQAGFMRRMGAWFYDTLIISAVMMLTGGAIVATLEMLYGAGIISYGEFPDVSSYLNHDPLWRNLYPVTLVSV
FVGFFAYFWCKGQTLGMRAWKLQVQQLDGSPITLTQAIIRMSTSAFGLGNLLVFISHDNSAFQDTWAKTRVIVLDKAI
>Mature_158_residues
MEEKMNTQKQAGFMRRMGAWFYDTLIISAVMMLTGGAIVATLEMLYGAGIISYGEFPDVSSYLNHDPLWRNLYPVTLVSV
FVGFFAYFWCKGQTLGMRAWKLQVQQLDGSPITLTQAIIRMSTSAFGLGNLLVFISHDNSAFQDTWAKTRVIVLDKAI

Specific function: Unknown

COG id: COG1714

COG function: function code S; Predicted membrane protein/domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17765; Mature: 17765

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEKMNTQKQAGFMRRMGAWFYDTLIISAVMMLTGGAIVATLEMLYGAGIISYGEFPDVS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCHH
SYLNHDPLWRNLYPVTLVSVFVGFFAYFWCKGQTLGMRAWKLQVQQLDGSPITLTQAIIR
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHEEECCCCCCHHHHHHHHH
MSTSAFGLGNLLVFISHDNSAFQDTWAKTRVIVLDKAI
HHCCCCCCCCEEEEEECCCCHHHHHHHHEEEEEEECCC
>Mature Secondary Structure
MEEKMNTQKQAGFMRRMGAWFYDTLIISAVMMLTGGAIVATLEMLYGAGIISYGEFPDVS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCHH
SYLNHDPLWRNLYPVTLVSVFVGFFAYFWCKGQTLGMRAWKLQVQQLDGSPITLTQAIIR
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHEEECCCCCCHHHHHHHHH
MSTSAFGLGNLLVFISHDNSAFQDTWAKTRVIVLDKAI
HHCCCCCCCCEEEEEECCCCHHHHHHHHEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA