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The map label for this gene is yhdE [C]

Identifier: 59710982

GI number: 59710982

Start: 406969

End: 407544

Strand: Direct

Name: yhdE [C]

Synonym: VF_0375

Alternate gene names: 59710982

Gene position: 406969-407544 (Clockwise)

Preceding gene: 59710981

Following gene: 59710983

Centisome position: 14.05

GC content: 40.45

Gene sequence:

>576_bases
ATGGAAGCGCAAGTTTTCTTAGCGTCAGGATCTCCGAGAAGAAAAGAGTTGTTAACCCAATTAGGTTATCAATTTGATGT
GTTATCGGTGGATGTTGAAGAGATACATCAAGAGCATGAAACGCCATTGATGTATGTAGAGCGCTTATCTAAAGATAAGG
CTCAAGCTGGCGTTAAAGCGATAGAAAAAACAAAGAATAAATATACCCCAGTCTTGGGCTCTGACACCATCGTTGTTATC
GATGGTGTTATTTTAGAAAAACCAAAAGATTTTAAAGATGCTAAGAGAATGCTCTTGGCACTGTCTGGTCGTCAACATCA
AGTAATGACTGCTGTAACGATTGCCACGCCTGAAAAAATAAGAACCAAAACAGTAATCACTCAGGTATGGTTTAAAACAC
TTTCTGAACAAGAAATAGAACAATATTGGGAAAGTGGGGAGCCTTGCGATAAAGCGGGTTCATACGGTATTCAAGGTAGT
GGTGGGCGATTTGTCTCGCGTATTGATGGCAGCTATCACGCTGTCATGGGACTGCCTTTGATGGAAACAGATCAGCTCTT
ACACCAATTTTTGTAA

Upstream 100 bases:

>100_bases
TTTTTATGGGCAGGCGTGTTAAACTTCCTACTATGGCCTTGGTTGTTTTTGTTAATGCGAAGAGTTCGCCGTCATTGGTC
AATTCGATAGGAAAGCAAGA

Downstream 100 bases:

>100_bases
AATTAGTGAGGTGCTCCAATGAGTACAGAGTTGTTAATAAACGTAACCCCGAGTGAAACTCGAGTTGCGATGATTGAAGC
CGGTGTGCTTCAAGAAGTTC

Product: Maf-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MEAQVFLASGSPRRKELLTQLGYQFDVLSVDVEEIHQEHETPLMYVERLSKDKAQAGVKAIEKTKNKYTPVLGSDTIVVI
DGVILEKPKDFKDAKRMLLALSGRQHQVMTAVTIATPEKIRTKTVITQVWFKTLSEQEIEQYWESGEPCDKAGSYGIQGS
GGRFVSRIDGSYHAVMGLPLMETDQLLHQFL

Sequences:

>Translated_191_residues
MEAQVFLASGSPRRKELLTQLGYQFDVLSVDVEEIHQEHETPLMYVERLSKDKAQAGVKAIEKTKNKYTPVLGSDTIVVI
DGVILEKPKDFKDAKRMLLALSGRQHQVMTAVTIATPEKIRTKTVITQVWFKTLSEQEIEQYWESGEPCDKAGSYGIQGS
GGRFVSRIDGSYHAVMGLPLMETDQLLHQFL
>Mature_191_residues
MEAQVFLASGSPRRKELLTQLGYQFDVLSVDVEEIHQEHETPLMYVERLSKDKAQAGVKAIEKTKNKYTPVLGSDTIVVI
DGVILEKPKDFKDAKRMLLALSGRQHQVMTAVTIATPEKIRTKTVITQVWFKTLSEQEIEQYWESGEPCDKAGSYGIQGS
GGRFVSRIDGSYHAVMGLPLMETDQLLHQFL

Specific function: Unknown

COG id: COG0424

COG function: function code D; Nucleotide-binding protein implicated in inhibition of septum formation

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the maf family

Homologues:

Organism=Homo sapiens, GI117553627, Length=191, Percent_Identity=39.7905759162304, Blast_Score=121, Evalue=4e-28,
Organism=Homo sapiens, GI291045183, Length=191, Percent_Identity=38.2198952879581, Blast_Score=104, Evalue=4e-23,
Organism=Homo sapiens, GI291045181, Length=118, Percent_Identity=46.6101694915254, Blast_Score=99, Evalue=3e-21,
Organism=Homo sapiens, GI310133124, Length=118, Percent_Identity=46.6101694915254, Blast_Score=98, Evalue=5e-21,
Organism=Escherichia coli, GI1789646, Length=186, Percent_Identity=52.6881720430108, Blast_Score=192, Evalue=9e-51,
Organism=Escherichia coli, GI87081830, Length=191, Percent_Identity=30.3664921465969, Blast_Score=80, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI193202443, Length=189, Percent_Identity=34.3915343915344, Blast_Score=100, Evalue=8e-22,
Organism=Saccharomyces cerevisiae, GI6324685, Length=208, Percent_Identity=27.4038461538462, Blast_Score=64, Evalue=1e-11,
Organism=Drosophila melanogaster, GI78706856, Length=180, Percent_Identity=39.4444444444444, Blast_Score=122, Evalue=2e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y375_VIBF1 (Q5E7X6)

Other databases:

- EMBL:   CP000020
- RefSeq:   YP_203758.1
- HSSP:   Q02169
- ProteinModelPortal:   Q5E7X6
- SMR:   Q5E7X6
- STRING:   Q5E7X6
- GeneID:   3277299
- GenomeReviews:   CP000020_GR
- KEGG:   vfi:VF_0375
- NMPDR:   fig|312309.3.peg.375
- eggNOG:   COG0424
- HOGENOM:   HBG414045
- OMA:   VVGLPLC
- PhylomeDB:   Q5E7X6
- ProtClustDB:   PRK00032
- BioCyc:   VFIS312309:VF0375-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00528
- InterPro:   IPR003697
- PIRSF:   PIRSF006305
- TIGRFAMs:   TIGR00172

Pfam domain/function: PF02545 Maf

EC number: NA

Molecular weight: Translated: 21485; Mature: 21485

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: ACT_SITE 34-34

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAQVFLASGSPRRKELLTQLGYQFDVLSVDVEEIHQEHETPLMYVERLSKDKAQAGVKA
CCCEEEEECCCCHHHHHHHHCCCEEEEEECCHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
IEKTKNKYTPVLGSDTIVVIDGVILEKPKDFKDAKRMLLALSGRQHQVMTAVTIATPEKI
HHHHHHHCCCCCCCCCEEEEECEEECCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCHHH
RTKTVITQVWFKTLSEQEIEQYWESGEPCDKAGSYGIQGSGGRFVSRIDGSYHAVMGLPL
HHHHHHHHHHHHHHCHHHHHHHHHCCCCCHHCCCCCCCCCCCCEEECCCCCEEEEECCCC
METDQLLHQFL
HHHHHHHHHHC
>Mature Secondary Structure
MEAQVFLASGSPRRKELLTQLGYQFDVLSVDVEEIHQEHETPLMYVERLSKDKAQAGVKA
CCCEEEEECCCCHHHHHHHHCCCEEEEEECCHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
IEKTKNKYTPVLGSDTIVVIDGVILEKPKDFKDAKRMLLALSGRQHQVMTAVTIATPEKI
HHHHHHHCCCCCCCCCEEEEECEEECCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCHHH
RTKTVITQVWFKTLSEQEIEQYWESGEPCDKAGSYGIQGSGGRFVSRIDGSYHAVMGLPL
HHHHHHHHHHHHHHCHHHHHHHHHCCCCCHHCCCCCCCCCCCCEEECCCCCEEEEECCCC
METDQLLHQFL
HHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA