Click here to switch to the map view.

The map label for this gene is mshP

Identifier: 59710977

GI number: 59710977

Start: 400937

End: 401329

Strand: Direct

Name: mshP

Synonym: VF_0370

Alternate gene names: NA

Gene position: 400937-401329 (Clockwise)

Preceding gene: 59710976

Following gene: 59710978

Centisome position: 13.84

GC content: 39.69

Gene sequence:

>393_bases
ATGTCCATTGTTGTCATGGTGGTGGTTGGCTTTTTATCTCTTAATTTATTAAAAGTGGAAAGCAGTAATCATGACACGCT
TTCTAAAGAAGTATTGGGGACTCAAGCATGGTTTTTAGCGCATTCGGGGGCTGAATGGGGATTAACTCAACTTTTTCCTC
TTGGGGTTTCAGGTGCTGATACAAGTATCTGTAATGGCGTGGTTCGTCGCCCTAGTATGAAATCAGATGAGAGCGGCTGT
AAACAAGAACCAGAAGTTGTATGCGTGAGAAATACGATGAATTATCACAGTGAAGAGATTCAATATTTCAAAATTACAAG
TTCAGTAACTTGTGGTTCTGGTATTGATCAAGTTACACGAGTTCAAGAAGTATGGGCAAAGGAGATTAACTGA

Upstream 100 bases:

>100_bases
GCTTTTAAAAGTGACCTTGGTGAAATGACTCAATATCAACATGATGTGCAGGTGATAAATGTTCCCTAATAAAAGAAAGC
AAAAGGGTAATTTGTTGGTT

Downstream 100 bases:

>100_bases
TGAATATAGTATGGCGAGTAATATTTATTTGTTTATCTTTGGTTTCTTTGTCTTTGCAGGCTCAAGATTTTACCATTCCA
CCTCAACAATGTGATGCATT

Product: MSHA biogenesis protein MshP

Products: NA

Alternate protein names: Exported Protein MshP

Number of amino acids: Translated: 130; Mature: 129

Protein sequence:

>130_residues
MSIVVMVVVGFLSLNLLKVESSNHDTLSKEVLGTQAWFLAHSGAEWGLTQLFPLGVSGADTSICNGVVRRPSMKSDESGC
KQEPEVVCVRNTMNYHSEEIQYFKITSSVTCGSGIDQVTRVQEVWAKEIN

Sequences:

>Translated_130_residues
MSIVVMVVVGFLSLNLLKVESSNHDTLSKEVLGTQAWFLAHSGAEWGLTQLFPLGVSGADTSICNGVVRRPSMKSDESGC
KQEPEVVCVRNTMNYHSEEIQYFKITSSVTCGSGIDQVTRVQEVWAKEIN
>Mature_129_residues
SIVVMVVVGFLSLNLLKVESSNHDTLSKEVLGTQAWFLAHSGAEWGLTQLFPLGVSGADTSICNGVVRRPSMKSDESGCK
QEPEVVCVRNTMNYHSEEIQYFKITSSVTCGSGIDQVTRVQEVWAKEIN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14267; Mature: 14136

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIVVMVVVGFLSLNLLKVESSNHDTLSKEVLGTQAWFLAHSGAEWGLTQLFPLGVSGAD
CHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHCCHHHEEEECCCCCCCHHEEECCCCCCC
TSICNGVVRRPSMKSDESGCKQEPEVVCVRNTMNYHSEEIQYFKITSSVTCGSGIDQVTR
HHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCHHHHHH
VQEVWAKEIN
HHHHHHHCCC
>Mature Secondary Structure 
SIVVMVVVGFLSLNLLKVESSNHDTLSKEVLGTQAWFLAHSGAEWGLTQLFPLGVSGAD
HHHHHHHHHHHHHEEEEEECCCCCHHHHHHHCCHHHEEEECCCCCCCHHEEECCCCCCC
TSICNGVVRRPSMKSDESGCKQEPEVVCVRNTMNYHSEEIQYFKITSSVTCGSGIDQVTR
HHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCHHHHHH
VQEVWAKEIN
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA