Click here to switch to the map view.

The map label for this gene is 59710965

Identifier: 59710965

GI number: 59710965

Start: 390197

End: 390538

Strand: Direct

Name: 59710965

Synonym: VF_0358

Alternate gene names: NA

Gene position: 390197-390538 (Clockwise)

Preceding gene: 59710964

Following gene: 59710966

Centisome position: 13.47

GC content: 35.38

Gene sequence:

>342_bases
ATGAAAAATCGCTTTTTAGTTTTTATTCTTATGTCTTTACCACTTTCAGTATCTGCATCTGAAGCGGTATTGGGGCATGA
TCCAACAGAACCATTAAGTTGGAGTACTCCTGCTCCAGCTCAAAAAAAGGTAATAAAAAAACGTCAATATTTCCCTTCTT
TGCAGGCAATAAATTGCAATGCGAAGTCTGATTGTTATGCCGTGTTAGATGATAAATCAATGAAAAGAGGCGATAAAGTC
TCAGGTTATACATTATTAACAATTGGTGAAGAAAGCGTTTCGATTGGTCGTGCGGGTAAGCAATGGCAACTTTCTCTATT
TCCACAAAATATTAAAAATTAA

Upstream 100 bases:

>100_bases
TGGCGAAACTTTCATTATGAAGTGAAAAAATACCCTATTGCAGAAGTCACAATCGAAGTTTACACCCTTGGTTCAAGTCG
TGGGTTTATTGGTGGTTAAT

Downstream 100 bases:

>100_bases
GGTTTGCAGTAATGAAAGTACGTAATGTCATCATTGGTTTCATGGTTGCCTCTTTAACAGGTTGCTCAATGGGTCATCGT
GACCCTGTTGAAATTAAACA

Product: hypothetical protein

Products: NA

Alternate protein names: Type IV Pilus Mannose-Sensitive Hemagglutinin D

Number of amino acids: Translated: 113; Mature: 113

Protein sequence:

>113_residues
MKNRFLVFILMSLPLSVSASEAVLGHDPTEPLSWSTPAPAQKKVIKKRQYFPSLQAINCNAKSDCYAVLDDKSMKRGDKV
SGYTLLTIGEESVSIGRAGKQWQLSLFPQNIKN

Sequences:

>Translated_113_residues
MKNRFLVFILMSLPLSVSASEAVLGHDPTEPLSWSTPAPAQKKVIKKRQYFPSLQAINCNAKSDCYAVLDDKSMKRGDKV
SGYTLLTIGEESVSIGRAGKQWQLSLFPQNIKN
>Mature_113_residues
MKNRFLVFILMSLPLSVSASEAVLGHDPTEPLSWSTPAPAQKKVIKKRQYFPSLQAINCNAKSDCYAVLDDKSMKRGDKV
SGYTLLTIGEESVSIGRAGKQWQLSLFPQNIKN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12530; Mature: 12530

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNRFLVFILMSLPLSVSASEAVLGHDPTEPLSWSTPAPAQKKVIKKRQYFPSLQAINCN
CCCCEEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECC
AKSDCYAVLDDKSMKRGDKVSGYTLLTIGEESVSIGRAGKQWQLSLFPQNIKN
CCCCEEEEECCCCCCCCCCCCCEEEEEECCCCEECCCCCCEEEEEECCCCCCC
>Mature Secondary Structure
MKNRFLVFILMSLPLSVSASEAVLGHDPTEPLSWSTPAPAQKKVIKKRQYFPSLQAINCN
CCCCEEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECC
AKSDCYAVLDDKSMKRGDKVSGYTLLTIGEESVSIGRAGKQWQLSLFPQNIKN
CCCCEEEEECCCCCCCCCCCCCEEEEEECCCCEECCCCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA