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The map label for this gene is yegM [C]

Identifier: 59710904

GI number: 59710904

Start: 303850

End: 305169

Strand: Direct

Name: yegM [C]

Synonym: VF_0297

Alternate gene names: 59710904

Gene position: 303850-305169 (Clockwise)

Preceding gene: 59710903

Following gene: 59710905

Centisome position: 10.49

GC content: 38.33

Gene sequence:

>1320_bases
ATGAAAATAAATAAGAAATACCTCTTTTTTCCAGTTGTTGCAGTTGGTGTGATTGTTCTTATTACCATCACAAAATTACG
TCCAGACGCTGAAACTAAGCCACTTGAAGACCGTTCAAAAGTCGTCAATATCCAACTATTAGAGCCTCAATCAATCGCAC
CTCAAGCCATTGGTTATGGAAAAATTAGACCGAAGTTTGAATGGAAAGCCATTGCGGAAGTATCAGGCAAAGTGGTGTAT
CGCCATCCTGAATTACATAAAGGAAATATCTTATTAGCCGGTACTGAAGTGTTGAGAATAGATCCATTGGATTATGAGTT
AAAACTCGCTCAAGCAGAAGCGGACTTAGGATCGAGCCAAACTCAATTAGCAAAAGTGGATTTAGAAGAAAAAAACATTC
GAAATACATTAAAAATAGAAAAAAACCGACTTTCTATCAGTAAGAAAGAGTTAAGCCGTAAAATAAATTTGCAAAAGAAA
GGGTTAACGTCTCAATCGGATTTAGACCAGCAGAATCAATCTTATTTAGCACAGCAGAAAGTGGTTCAAGATATTCAAAA
TCAAATCTTATTATTGCCTGATGAAAAAAAAGTAGCAGCGGCAATGGTTAAGGTAAACCAAGCTAAATTAGAAGAAGCGC
AACGTTCTTTAGAAAAAACTTCGATTATATTACCAACAGATGTGCGAATTTCTGAGGTGGATATTGAAGCGGATCAAGTA
GTTAATCTACAGCAAACCATGTTTATTGCGCATGGAATTAAAACCATGGAGATGGAAGCGCAAATCTCTATTCATGATAT
GCAAACATTAGCTCAAAGTGTGAAAGCTTTTCAGCTAAGTGAGCAAGGTATGCCAAATATTGATTCATTACCATTAACGG
CGAATGTGGAATTAAGCAGTGGTCGCTTTGATGCTAAATGGGAAGCGAAAGTCGCTCGTATTAGTGAAACTGTCGATCCA
AATCAAGCAACGGTTGGTGTCATTTTAGAAATAGATCAAAATTACCGAGCTTTGCAACCTAACTCATTGCCACCATTAGT
GAATGGGATGTTTGTGAAAGCAAGGATCGAGGGTGACGCGTCAGAGCAGTGGGTGATCCCTGAAAGTGCGTTGCATGGCG
ATAAGATCTATTTATTAGGGCAAGATAACAAATTAATTATCCTTCCGATTGAGATTGTTTATCGACGCAATAACCAGGTT
GCCGTTGCCGGAGATATTAAGAGTCATGATCGTTTGATCTTAAATGATCTGCTGCCTGCGATTAATGGCATGCAATTGCG
CTTGGCCAAATCACATAATGATGAGGAGCCTGTTCAATGA

Upstream 100 bases:

>100_bases
CATAATATTGAGTTGAATGAAACGTTTTTGATGGAATTACTAGAACATAATATTCGTTTATTAGGCGAAGGATTATTAAA
AAATAAAAGAGATACAGATA

Downstream 100 bases:

>100_bases
TCAAGTTCTTTGCTCGCCATCCAACCGCAGCTAACTTATTAATGCTCACTTTATTGCTGCTTGGTTTGGTTTCTTTATCT
CAATTAAAACGAGAGACATT

Product: acriflavin resistance periplasmic protein

Products: NA

Alternate protein names: Membrane-Fusion Protein; Efflux Transporter RND Family MFP Subunit; Secretion Protein HlyD; HlyD Family Secretion Protein; Acr Family Membrane-Fusion Protein; RND Efflux System Membrane Fusion Protein; Secretion Protein HlyD Family Protein; Auxiliary Transport Protein MFP Family; Acriflavin Resistance Periplasmic Protein; Multidrug Resistance Efflux Pump

Number of amino acids: Translated: 439; Mature: 439

Protein sequence:

>439_residues
MKINKKYLFFPVVAVGVIVLITITKLRPDAETKPLEDRSKVVNIQLLEPQSIAPQAIGYGKIRPKFEWKAIAEVSGKVVY
RHPELHKGNILLAGTEVLRIDPLDYELKLAQAEADLGSSQTQLAKVDLEEKNIRNTLKIEKNRLSISKKELSRKINLQKK
GLTSQSDLDQQNQSYLAQQKVVQDIQNQILLLPDEKKVAAAMVKVNQAKLEEAQRSLEKTSIILPTDVRISEVDIEADQV
VNLQQTMFIAHGIKTMEMEAQISIHDMQTLAQSVKAFQLSEQGMPNIDSLPLTANVELSSGRFDAKWEAKVARISETVDP
NQATVGVILEIDQNYRALQPNSLPPLVNGMFVKARIEGDASEQWVIPESALHGDKIYLLGQDNKLIILPIEIVYRRNNQV
AVAGDIKSHDRLILNDLLPAINGMQLRLAKSHNDEEPVQ

Sequences:

>Translated_439_residues
MKINKKYLFFPVVAVGVIVLITITKLRPDAETKPLEDRSKVVNIQLLEPQSIAPQAIGYGKIRPKFEWKAIAEVSGKVVY
RHPELHKGNILLAGTEVLRIDPLDYELKLAQAEADLGSSQTQLAKVDLEEKNIRNTLKIEKNRLSISKKELSRKINLQKK
GLTSQSDLDQQNQSYLAQQKVVQDIQNQILLLPDEKKVAAAMVKVNQAKLEEAQRSLEKTSIILPTDVRISEVDIEADQV
VNLQQTMFIAHGIKTMEMEAQISIHDMQTLAQSVKAFQLSEQGMPNIDSLPLTANVELSSGRFDAKWEAKVARISETVDP
NQATVGVILEIDQNYRALQPNSLPPLVNGMFVKARIEGDASEQWVIPESALHGDKIYLLGQDNKLIILPIEIVYRRNNQV
AVAGDIKSHDRLILNDLLPAINGMQLRLAKSHNDEEPVQ
>Mature_439_residues
MKINKKYLFFPVVAVGVIVLITITKLRPDAETKPLEDRSKVVNIQLLEPQSIAPQAIGYGKIRPKFEWKAIAEVSGKVVY
RHPELHKGNILLAGTEVLRIDPLDYELKLAQAEADLGSSQTQLAKVDLEEKNIRNTLKIEKNRLSISKKELSRKINLQKK
GLTSQSDLDQQNQSYLAQQKVVQDIQNQILLLPDEKKVAAAMVKVNQAKLEEAQRSLEKTSIILPTDVRISEVDIEADQV
VNLQQTMFIAHGIKTMEMEAQISIHDMQTLAQSVKAFQLSEQGMPNIDSLPLTANVELSSGRFDAKWEAKVARISETVDP
NQATVGVILEIDQNYRALQPNSLPPLVNGMFVKARIEGDASEQWVIPESALHGDKIYLLGQDNKLIILPIEIVYRRNNQV
AVAGDIKSHDRLILNDLLPAINGMQLRLAKSHNDEEPVQ

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49148; Mature: 49148

Theoretical pI: Translated: 6.65; Mature: 6.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKINKKYLFFPVVAVGVIVLITITKLRPDAETKPLEDRSKVVNIQLLEPQSIAPQAIGYG
CCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCC
KIRPKFEWKAIAEVSGKVVYRHPELHKGNILLAGTEVLRIDPLDYELKLAQAEADLGSSQ
CCCCCCCCEEEEECCCEEEEECCCCCCCCEEEECCEEEEECCCCCEEEEEEHHCCCCCCC
TQLAKVDLEEKNIRNTLKIEKNRLSISKKELSRKINLQKKGLTSQSDLDQQNQSYLAQQK
CEEEEECCCHHCCCHHEEEEHHHHCCCHHHHHHHCCCHHCCCCCCHHCCHHHHHHHHHHH
VVQDIQNQILLLPDEKKVAAAMVKVNQAKLEEAQRSLEKTSIILPTDVRISEVDIEADQV
HHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCEEEEECCCHHHH
VNLQQTMFIAHGIKTMEMEAQISIHDMQTLAQSVKAFQLSEQGMPNIDSLPLTANVELSS
CCHHHHHHHHCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECC
GRFDAKWEAKVARISETVDPNQATVGVILEIDQNYRALQPNSLPPLVNGMFVKARIEGDA
CCCCCCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCC
SEQWVIPESALHGDKIYLLGQDNKLIILPIEIVYRRNNQVAVAGDIKSHDRLILNDLLPA
CCEEECCHHHCCCCEEEEEECCCEEEEEEEEEEEECCCCEEEEECCCCCCCHHHHHHHHH
INGMQLRLAKSHNDEEPVQ
CCCCEEEEECCCCCCCCCC
>Mature Secondary Structure
MKINKKYLFFPVVAVGVIVLITITKLRPDAETKPLEDRSKVVNIQLLEPQSIAPQAIGYG
CCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCC
KIRPKFEWKAIAEVSGKVVYRHPELHKGNILLAGTEVLRIDPLDYELKLAQAEADLGSSQ
CCCCCCCCEEEEECCCEEEEECCCCCCCCEEEECCEEEEECCCCCEEEEEEHHCCCCCCC
TQLAKVDLEEKNIRNTLKIEKNRLSISKKELSRKINLQKKGLTSQSDLDQQNQSYLAQQK
CEEEEECCCHHCCCHHEEEEHHHHCCCHHHHHHHCCCHHCCCCCCHHCCHHHHHHHHHHH
VVQDIQNQILLLPDEKKVAAAMVKVNQAKLEEAQRSLEKTSIILPTDVRISEVDIEADQV
HHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCEEEEECCCHHHH
VNLQQTMFIAHGIKTMEMEAQISIHDMQTLAQSVKAFQLSEQGMPNIDSLPLTANVELSS
CCHHHHHHHHCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECC
GRFDAKWEAKVARISETVDPNQATVGVILEIDQNYRALQPNSLPPLVNGMFVKARIEGDA
CCCCCCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCC
SEQWVIPESALHGDKIYLLGQDNKLIILPIEIVYRRNNQVAVAGDIKSHDRLILNDLLPA
CCEEECCHHHCCCCEEEEEECCCEEEEEEEEEEEECCCCEEEEECCCCCCCHHHHHHHHH
INGMQLRLAKSHNDEEPVQ
CCCCEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA