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The map label for this gene is 59710903

Identifier: 59710903

GI number: 59710903

Start: 303219

End: 303863

Strand: Direct

Name: 59710903

Synonym: VF_0296

Alternate gene names: NA

Gene position: 303219-303863 (Clockwise)

Preceding gene: 59710897

Following gene: 59710904

Centisome position: 10.46

GC content: 34.73

Gene sequence:

>645_bases
ATGAAGCAGTCAGGAAGGCCTAAAGGTGAATCAGAAGTTCGAGAAAAACTCATTTTTCATGCGAGAGAGCTTTTTATTTC
CATGCCCTATAACAAAGTATCGACGAGGCTCATAGCCACTAATGCTAACGTAAATATTGCCATGATCCGTTATTACTTTG
GTAACAAAGAAGGACTTTTTGAGGCGATGTTTAAGGAGACTATTGCTCCTGTTACTCAGCAATTTCAACGATTATTAAAA
GATGATACTGAACAAGATCTGGTTGAGTTTATGCGAGCGTATTATAAGGCCATGATTAAAGTTCCAGCCTTCCCTAAATT
AATCTTGCGCATTATGGATGCTGAGAGTGAACAGCAAGCGGCACTTCAGCAAATTATTATTGGGATATTGCAGCCAATGC
AAAACAAATTATTCGATCCCCAAAAAAGTAAGGCGTTATTTAAAAATGGAGTTGATCCAATTAAAGCTCGTCTTTCGTTA
ATGAGTTTAATGATTTTTCCATTTCTTGCCCCTAAGAAAATGTTAGAGCTTCATAATATTGAGTTGAATGAAACGTTTTT
GATGGAATTACTAGAACATAATATTCGTTTATTAGGCGAAGGATTATTAAAAAATAAAAGAGATACAGATAATGAAAATA
AATAA

Upstream 100 bases:

>100_bases
AGTGAATTAATTTGTTAGAACAAAGAGGGAAGTTATCTATAATTAATCAAGTGATTAACTGTCTTTAAAGTCGTCAACTG
TAAATAAGGTGTTATTGGTA

Downstream 100 bases:

>100_bases
GAAATACCTCTTTTTTCCAGTTGTTGCAGTTGGTGTGATTGTTCTTATTACCATCACAAAATTACGTCCAGACGCTGAAA
CTAAGCCACTTGAAGACCGT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator TetR Family; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator Of TetR Family Protein; Regulatory Protein TetR

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MKQSGRPKGESEVREKLIFHARELFISMPYNKVSTRLIATNANVNIAMIRYYFGNKEGLFEAMFKETIAPVTQQFQRLLK
DDTEQDLVEFMRAYYKAMIKVPAFPKLILRIMDAESEQQAALQQIIIGILQPMQNKLFDPQKSKALFKNGVDPIKARLSL
MSLMIFPFLAPKKMLELHNIELNETFLMELLEHNIRLLGEGLLKNKRDTDNENK

Sequences:

>Translated_214_residues
MKQSGRPKGESEVREKLIFHARELFISMPYNKVSTRLIATNANVNIAMIRYYFGNKEGLFEAMFKETIAPVTQQFQRLLK
DDTEQDLVEFMRAYYKAMIKVPAFPKLILRIMDAESEQQAALQQIIIGILQPMQNKLFDPQKSKALFKNGVDPIKARLSL
MSLMIFPFLAPKKMLELHNIELNETFLMELLEHNIRLLGEGLLKNKRDTDNENK
>Mature_214_residues
MKQSGRPKGESEVREKLIFHARELFISMPYNKVSTRLIATNANVNIAMIRYYFGNKEGLFEAMFKETIAPVTQQFQRLLK
DDTEQDLVEFMRAYYKAMIKVPAFPKLILRIMDAESEQQAALQQIIIGILQPMQNKLFDPQKSKALFKNGVDPIKARLSL
MSLMIFPFLAPKKMLELHNIELNETFLMELLEHNIRLLGEGLLKNKRDTDNENK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24852; Mature: 24852

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQSGRPKGESEVREKLIFHARELFISMPYNKVSTRLIATNANVNIAMIRYYFGNKEGLF
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHEEEEECCCCEEEEEEEECCCCCHHH
EAMFKETIAPVTQQFQRLLKDDTEQDLVEFMRAYYKAMIKVPAFPKLILRIMDAESEQQA
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHH
ALQQIIIGILQPMQNKLFDPQKSKALFKNGVDPIKARLSLMSLMIFPFLAPKKMLELHNI
HHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHCC
ELNETFLMELLEHNIRLLGEGLLKNKRDTDNENK
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKQSGRPKGESEVREKLIFHARELFISMPYNKVSTRLIATNANVNIAMIRYYFGNKEGLF
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHEEEEECCCCEEEEEEEECCCCCHHH
EAMFKETIAPVTQQFQRLLKDDTEQDLVEFMRAYYKAMIKVPAFPKLILRIMDAESEQQA
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHH
ALQQIIIGILQPMQNKLFDPQKSKALFKNGVDPIKARLSLMSLMIFPFLAPKKMLELHNI
HHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHCC
ELNETFLMELLEHNIRLLGEGLLKNKRDTDNENK
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA