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The map label for this gene is ubiX [C]

Identifier: 59710873

GI number: 59710873

Start: 269539

End: 270156

Strand: Direct

Name: ubiX [C]

Synonym: VF_0266

Alternate gene names: 59710873

Gene position: 269539-270156 (Clockwise)

Preceding gene: 59710872

Following gene: 59710874

Centisome position: 9.3

GC content: 41.75

Gene sequence:

>618_bases
ATGAGTAAACAAAAAGCAATTACGTTAGCTATGACAGGGGCTTCAGGAGCGCCTTATGGATTGCGTTTGCTCGAGTGTTT
ACTTGCTGCTGATTATCACGTGTATTTTCTTATCTCTTCTGCTGCTAGAGTTGTAATGGCGACAGAACATGATTTGAAAT
TACCAAGTGGACCTGATGCTATGAAAGCGGCATTAGTTGAACACTTAGGTTGTAATGCAGATAAGCTAACTGTTTGTGGT
AAAGAGGACTGGTTTTCTCCTGTAGCTTCTGGTTCTGCTGCGCCTAAACAAATGATTGTCTGCCCATGTTCAGCTGGTAG
TGTTGCTTCAATTGCTCATGGTATTTCTGATAATTTAATCGAAAGAGCGGCTGATGTGGTTTTAAAAGAACGAGGTCAGC
TGATTCTTGTGGTTCGAGAGGCGCCATTCTCAACATTACATTTAGAGAATATGCTTAAGTTGTCGCAAATAGGGGCGACA
ATTATGCCTGCTGCCCCAGGTTTTTATCATCAACCCAAATCCATTGAAGATTTAATCGATTTTATGGTAGCAAGAATTTT
GGATCATTTAGGTGTAGAGCAAGGGCTTGTACCTCGCTGGGGTTATGACCATCGATAG

Upstream 100 bases:

>100_bases
AAATTTTGGTAATGAGCAATGGTGGCTTTGAAGGTATTCACGGTAAATTGCTTTCAGGCTTAGGTGATGCCGTAAAACAT
ATAGAAATGGTGGATTAAAC

Downstream 100 bases:

>100_bases
CTGCACAATAAAAGCTCTGGCTCATTAAGCTATTCACACTTACAATACGACTTCTCATCGGGGAGCTTTGGCTGAGATTA
ATGAAGATTGGATAATGTTC

Product: aromatic acid decarboxylase

Products: 2-octaprenylphenol; CO2 [C]

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 204

Protein sequence:

>205_residues
MSKQKAITLAMTGASGAPYGLRLLECLLAADYHVYFLISSAARVVMATEHDLKLPSGPDAMKAALVEHLGCNADKLTVCG
KEDWFSPVASGSAAPKQMIVCPCSAGSVASIAHGISDNLIERAADVVLKERGQLILVVREAPFSTLHLENMLKLSQIGAT
IMPAAPGFYHQPKSIEDLIDFMVARILDHLGVEQGLVPRWGYDHR

Sequences:

>Translated_205_residues
MSKQKAITLAMTGASGAPYGLRLLECLLAADYHVYFLISSAARVVMATEHDLKLPSGPDAMKAALVEHLGCNADKLTVCG
KEDWFSPVASGSAAPKQMIVCPCSAGSVASIAHGISDNLIERAADVVLKERGQLILVVREAPFSTLHLENMLKLSQIGAT
IMPAAPGFYHQPKSIEDLIDFMVARILDHLGVEQGLVPRWGYDHR
>Mature_204_residues
SKQKAITLAMTGASGAPYGLRLLECLLAADYHVYFLISSAARVVMATEHDLKLPSGPDAMKAALVEHLGCNADKLTVCGK
EDWFSPVASGSAAPKQMIVCPCSAGSVASIAHGISDNLIERAADVVLKERGQLILVVREAPFSTLHLENMLKLSQIGATI
MPAAPGFYHQPKSIEDLIDFMVARILDHLGVEQGLVPRWGYDHR

Specific function: Unknown

COG id: COG0163

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polyprenyl p-hydroxybenzoate / phenylacrylic acid decarboxylases family [H]

Homologues:

Organism=Escherichia coli, GI1788650, Length=199, Percent_Identity=37.6884422110553, Blast_Score=131, Evalue=3e-32,
Organism=Saccharomyces cerevisiae, GI6320746, Length=198, Percent_Identity=39.8989898989899, Blast_Score=133, Evalue=2e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003382
- InterPro:   IPR004507 [H]

Pfam domain/function: PF02441 Flavoprotein [H]

EC number: 4.1.1.- [C]

Molecular weight: Translated: 22050; Mature: 21919

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKQKAITLAMTGASGAPYGLRLLECLLAADYHVYFLISSAARVVMATEHDLKLPSGPDA
CCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEHHHCEEEEECCCCCCCCCCCHH
MKAALVEHLGCNADKLTVCGKEDWFSPVASGSAAPKQMIVCPCSAGSVASIAHGISDNLI
HHHHHHHHHCCCCCEEEECCCHHHCCHHHCCCCCCCEEEEEECCCCCHHHHHHCHHHHHH
ERAADVVLKERGQLILVVREAPFSTLHLENMLKLSQIGATIMPAAPGFYHQPKSIEDLID
HHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCCEECCCCCCCCCCCCCHHHHHH
FMVARILDHLGVEQGLVPRWGYDHR
HHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SKQKAITLAMTGASGAPYGLRLLECLLAADYHVYFLISSAARVVMATEHDLKLPSGPDA
CCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEHHHCEEEEECCCCCCCCCCCHH
MKAALVEHLGCNADKLTVCGKEDWFSPVASGSAAPKQMIVCPCSAGSVASIAHGISDNLI
HHHHHHHHHCCCCCEEEECCCHHHCCHHHCCCCCCCEEEEEECCCCCHHHHHHCHHHHHH
ERAADVVLKERGQLILVVREAPFSTLHLENMLKLSQIGATIMPAAPGFYHQPKSIEDLID
HHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCCEECCCCCCCCCCCCCHHHHHH
FMVARILDHLGVEQGLVPRWGYDHR
HHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 3-octaprenyl-4-hydroxybenzoate [C]

Specific reaction: 3-octaprenyl-4-hydroxybenzoate = 2-octaprenylphenol + CO2 [C]

General reaction: Carbon-Carbon Lyases; Carboxy-Lyases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]