Click here to switch to the map view.

The map label for this gene is mioC [H]

Identifier: 59710608

GI number: 59710608

Start: 313

End: 747

Strand: Reverse

Name: mioC [H]

Synonym: VF_0001

Alternate gene names: 59710608

Gene position: 747-313 (Counterclockwise)

Preceding gene: 59710609

Following gene: NA

Centisome position: 0.03

GC content: 36.78

Gene sequence:

>435_bases
ATGAAAAAAGTATCTATTATTACAGGAAGCACTCTAGGTGGTGCTGAGTATGTTGGTGACCATCTTGCTGATTTATTAGA
AGAAATGGATTTTTCCACCGATATTCATAATCAACCAAATTTAGATGATATTGATATTGATAGCTTATGGTTACTCGTTG
TATCAACTCACGGTGCTGGTGATTACCCTGACAACATTAAACCATTTATTCAACAGTTAGAAAGCGTGACTCAGCCATTA
TCGAGCGTTGAATTTGCTGTTGTTGCTATCGGTGATTCAAGTTATGACACTTTCTGCGCAGCAGGAAAATCACTTCAAAA
TACCTTAAAAGAGCATGGCGCTATCGAAAAGTACCCTCTATTAGAGATAGATGTAACTCAAAATAGTATCCCTGAAGAAC
CAGCAGAATTGTGGCTAAAACAACACATTTGTTAA

Upstream 100 bases:

>100_bases
TATATTTACTTCATTCTGTATTGGTAAATAAAACCAATATTAATAAGATTAATAATGGGCCTATGTAGGCCCATTTTTTA
TATTTTTATAGGATAAATTC

Downstream 100 bases:

>100_bases
TAAAAAGTGTTGTCCGATCTATAAAAGTTATTAAATAGATGATACCTACTATGTGGATAACTATAGAAAGATCCAGTGAT
CAAGTTATAGTTATCCATTG

Product: flavodoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MKKVSIITGSTLGGAEYVGDHLADLLEEMDFSTDIHNQPNLDDIDIDSLWLLVVSTHGAGDYPDNIKPFIQQLESVTQPL
SSVEFAVVAIGDSSYDTFCAAGKSLQNTLKEHGAIEKYPLLEIDVTQNSIPEEPAELWLKQHIC

Sequences:

>Translated_144_residues
MKKVSIITGSTLGGAEYVGDHLADLLEEMDFSTDIHNQPNLDDIDIDSLWLLVVSTHGAGDYPDNIKPFIQQLESVTQPL
SSVEFAVVAIGDSSYDTFCAAGKSLQNTLKEHGAIEKYPLLEIDVTQNSIPEEPAELWLKQHIC
>Mature_144_residues
MKKVSIITGSTLGGAEYVGDHLADLLEEMDFSTDIHNQPNLDDIDIDSLWLLVVSTHGAGDYPDNIKPFIQQLESVTQPL
SSVEFAVVAIGDSSYDTFCAAGKSLQNTLKEHGAIEKYPLLEIDVTQNSIPEEPAELWLKQHIC

Specific function: Probable electron transporter required for biotin synthase activity [H]

COG id: COG0716

COG function: function code C; Flavodoxins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 flavodoxin-like domain [H]

Homologues:

Organism=Escherichia coli, GI1790181, Length=139, Percent_Identity=46.7625899280576, Blast_Score=136, Evalue=5e-34,
Organism=Escherichia coli, GI1789154, Length=143, Percent_Identity=30.7692307692308, Blast_Score=74, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008254 [H]

Pfam domain/function: PF00258 Flavodoxin_1 [H]

EC number: NA

Molecular weight: Translated: 15815; Mature: 15815

Theoretical pI: Translated: 4.01; Mature: 4.01

Prosite motif: PS50902 FLAVODOXIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVSIITGSTLGGAEYVGDHLADLLEEMDFSTDIHNQPNLDDIDIDSLWLLVVSTHGAG
CCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCC
DYPDNIKPFIQQLESVTQPLSSVEFAVVAIGDSSYDTFCAAGKSLQNTLKEHGAIEKYPL
CCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHCCHHHHHHHHHCCCCCCCCC
LEIDVTQNSIPEEPAELWLKQHIC
EEEECCCCCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MKKVSIITGSTLGGAEYVGDHLADLLEEMDFSTDIHNQPNLDDIDIDSLWLLVVSTHGAG
CCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCC
DYPDNIKPFIQQLESVTQPLSSVEFAVVAIGDSSYDTFCAAGKSLQNTLKEHGAIEKYPL
CCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHCCHHHHHHHHHCCCCCCCCC
LEIDVTQNSIPEEPAELWLKQHIC
EEEECCCCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]