| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
Click here to switch to the map view.
The map label for this gene is acs [H]
Identifier: 172087770
GI number: 172087770
Start: 2672512
End: 2674461
Strand: Direct
Name: acs [H]
Synonym: VF_2383
Alternate gene names: 172087770
Gene position: 2672512-2674461 (Clockwise)
Preceding gene: 59712989
Following gene: 59712992
Centisome position: 92.23
GC content: 43.74
Gene sequence:
>1950_bases ATGAGTGAGATTCACGTGTACCCGGTCAATCAAGATATCGCTAATAATGCACACGCTGATGATGATAAATATCGTGAAAT GTACCAGCAATCCGTTATCAACCCTGAAGGATTTTGGCGTGAGCATGGACAAATTGTTGATTGGATGACTCCTTACACCA AAGTTAAAAACACCTCTTTTGATACGGGTCATGTTGATATTAAGTGGTTTGAAGATGGTGAACTTAATGTATCGGCAAAC TGTATTGATCGTCATTTAGCCACCCGAGGTAATGACGTTGCCATTATTTGGGAAGGCGATGACCCACAAGACGATGCCTC TATTACCTTTAATGAACTGCATGAGCAAGTTTGTAAATTCTCTAATACACTAAAAAGCCAAGGCGTTCGTAAAGGCGATG TGGTTTGTATTTATATGCCAATGGTGGCAGAAGCGGCTGTTGCGATGCTGGCTTGTACTCGCATCGGCGCTGTTCATACC GTGGTATTTGGTGGTTTCTCACCAGAAGCTCTCGCAGGTCGAATCATTGATTCGGATGCAAAAGTCGTGATTACTGCGGA TGAAGGCGTTCGCGGCGGACGTACCGTTCCACTGAAAAAGAATGTTGATGATGCACTGAATAATCCAGACGTAACCACCA TTGAAAAAGTCGTGGTATTTCAACGTACAGGTAATGACATTGAATGGTCTGAAGGACGTGATGTTTGGTGGCACGAAGCA ACGGCTGTTGCCTCCCCACATTGTGAACCAGAAGCAATGAATGCCGAAGACCCTCTATTTATCCTTTATACCTCAGGCTC AACAGGAAAACCTAAAGGTGTACTTCATACCACTGGCGGCTACCTTGTCTATGCAGCCATAACCTTTAAATATATTTTCG ATTATCAAGAAGGTGAAGTGTTCTGGTGTACTGCGGATGTTGGTTGGATCACAGGTCATACTTACTTAATTTATGGCCCT CTTGCTAATGGAGCTAAAACCATCTTGTTTGAAGGAGTACCGAATTACCCAAGCACGAGCCGCATGAGTGAAGTGGTAGA TAAACATAATGTTAATATTCTATACACAGCACCAACAGCCATCAGAGCACTTATGGCTCAAGGCACTGAAGCGGTTCAAG GTACATCGCGCAGCTCACTACGAGTCATGGGCTCGGTAGGTGAACCAATCAACCCTGAAGCATGGGAATGGTATTACAAC ACAATTGGTGATGCCCGTTGCCCTATTGTTGATACATGGTGGCAAACAGAAACGGGAGGCATTTTAATTTCCCCTCTTCC TGGTGCAACAGCATTAAAACCAGGATCAGCGACTCGTCCATTCTTTGGTGTTCAACCCGCTTTAGTGGATAATATGGGTA ATATTATTGAAGGAGCTACTGACGGGAACCTTGTCATTACCGACTCTTGGCCGGGACAAATGCGAACCATTTATGGTGAC CATGACCGCTTTGAACAAACTTACTTTTCTACCTTTAAAGGCATGTATTTTACCAGTGACGGCGCTCGACGAGATGAAGA TGGTTATTACTGGATCACTGGACGTGTTGATGACGTATTAAACGTATCAGGCCACCGCATGGGAACAGCCGAAGTTGAAT CTGCATTAGTGGCGTTTGATAAAATTGCTGAAGCTGCAATTGTTGGCGTACCACATGATATTAAAGGCCAAGCGATTTAT GCCTATATCACCCTAAATTCAGGCGAAATTCCAAGCGCAGAGCTACATAAAGAAGTCAAAGACTGGGTTAGAAAAGAAAT TGGACCGATTGCTACTCCTGACTTTTTACATTGGACTGATTCATTACCTAAAACCCGTTCAGGCAAAATTATGCGTCGAA TCCTTCGTAAAATAGCGACAGGAGATACCTCTAATCTAGGAGATACCTCGACACTAGCTGATCCAAGTGTGGTTGATAAG CTGATCGAAGAACAAAGAAAGATAGCTTAA
Upstream 100 bases:
>100_bases ATCAACCTTACAAATAAAAAAGCAGTACCAATGACGGTGCTGTACTGAAATCCAATAATAAATAAATCTGGATATTTGCT GTATTCACAAGGAGAACAAC
Downstream 100 bases:
>100_bases CCAAATATAAGCGTTCTAAAACATAACATTAACGCGTAAATTTTAATTAAAAGTCATCATAGATTTTCTGTGATGACTTT TTTGATGTGACGTTTAGCTC
Product: acetyl-CoA synthetase
Products: NA
Alternate protein names: Acetate--CoA ligase; Acyl-activating enzyme [H]
Number of amino acids: Translated: 649; Mature: 648
Protein sequence:
>649_residues MSEIHVYPVNQDIANNAHADDDKYREMYQQSVINPEGFWREHGQIVDWMTPYTKVKNTSFDTGHVDIKWFEDGELNVSAN CIDRHLATRGNDVAIIWEGDDPQDDASITFNELHEQVCKFSNTLKSQGVRKGDVVCIYMPMVAEAAVAMLACTRIGAVHT VVFGGFSPEALAGRIIDSDAKVVITADEGVRGGRTVPLKKNVDDALNNPDVTTIEKVVVFQRTGNDIEWSEGRDVWWHEA TAVASPHCEPEAMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAAITFKYIFDYQEGEVFWCTADVGWITGHTYLIYGP LANGAKTILFEGVPNYPSTSRMSEVVDKHNVNILYTAPTAIRALMAQGTEAVQGTSRSSLRVMGSVGEPINPEAWEWYYN TIGDARCPIVDTWWQTETGGILISPLPGATALKPGSATRPFFGVQPALVDNMGNIIEGATDGNLVITDSWPGQMRTIYGD HDRFEQTYFSTFKGMYFTSDGARRDEDGYYWITGRVDDVLNVSGHRMGTAEVESALVAFDKIAEAAIVGVPHDIKGQAIY AYITLNSGEIPSAELHKEVKDWVRKEIGPIATPDFLHWTDSLPKTRSGKIMRRILRKIATGDTSNLGDTSTLADPSVVDK LIEEQRKIA
Sequences:
>Translated_649_residues MSEIHVYPVNQDIANNAHADDDKYREMYQQSVINPEGFWREHGQIVDWMTPYTKVKNTSFDTGHVDIKWFEDGELNVSAN CIDRHLATRGNDVAIIWEGDDPQDDASITFNELHEQVCKFSNTLKSQGVRKGDVVCIYMPMVAEAAVAMLACTRIGAVHT VVFGGFSPEALAGRIIDSDAKVVITADEGVRGGRTVPLKKNVDDALNNPDVTTIEKVVVFQRTGNDIEWSEGRDVWWHEA TAVASPHCEPEAMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAAITFKYIFDYQEGEVFWCTADVGWITGHTYLIYGP LANGAKTILFEGVPNYPSTSRMSEVVDKHNVNILYTAPTAIRALMAQGTEAVQGTSRSSLRVMGSVGEPINPEAWEWYYN TIGDARCPIVDTWWQTETGGILISPLPGATALKPGSATRPFFGVQPALVDNMGNIIEGATDGNLVITDSWPGQMRTIYGD HDRFEQTYFSTFKGMYFTSDGARRDEDGYYWITGRVDDVLNVSGHRMGTAEVESALVAFDKIAEAAIVGVPHDIKGQAIY AYITLNSGEIPSAELHKEVKDWVRKEIGPIATPDFLHWTDSLPKTRSGKIMRRILRKIATGDTSNLGDTSTLADPSVVDK LIEEQRKIA >Mature_648_residues SEIHVYPVNQDIANNAHADDDKYREMYQQSVINPEGFWREHGQIVDWMTPYTKVKNTSFDTGHVDIKWFEDGELNVSANC IDRHLATRGNDVAIIWEGDDPQDDASITFNELHEQVCKFSNTLKSQGVRKGDVVCIYMPMVAEAAVAMLACTRIGAVHTV VFGGFSPEALAGRIIDSDAKVVITADEGVRGGRTVPLKKNVDDALNNPDVTTIEKVVVFQRTGNDIEWSEGRDVWWHEAT AVASPHCEPEAMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAAITFKYIFDYQEGEVFWCTADVGWITGHTYLIYGPL ANGAKTILFEGVPNYPSTSRMSEVVDKHNVNILYTAPTAIRALMAQGTEAVQGTSRSSLRVMGSVGEPINPEAWEWYYNT IGDARCPIVDTWWQTETGGILISPLPGATALKPGSATRPFFGVQPALVDNMGNIIEGATDGNLVITDSWPGQMRTIYGDH DRFEQTYFSTFKGMYFTSDGARRDEDGYYWITGRVDDVLNVSGHRMGTAEVESALVAFDKIAEAAIVGVPHDIKGQAIYA YITLNSGEIPSAELHKEVKDWVRKEIGPIATPDFLHWTDSLPKTRSGKIMRRILRKIATGDTSNLGDTSTLADPSVVDKL IEEQRKIA
Specific function: Enables The Cell To Use Acetate During Aerobic Growth To Generate Energy Via The Tca Cycle, And Biosynthetic Compounds Via The Glyoxylate Shunt. Acetylates Chey, The Response Regulator Involved In Flagellar Movement And Chemotaxis. [C]
COG id: COG0365
COG function: function code I; Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATP-dependent AMP-binding enzyme family [H]
Homologues:
Organism=Homo sapiens, GI8923896, Length=664, Percent_Identity=51.6566265060241, Blast_Score=696, Evalue=0.0, Organism=Homo sapiens, GI253970489, Length=678, Percent_Identity=51.0324483775811, Blast_Score=693, Evalue=0.0, Organism=Homo sapiens, GI28416953, Length=629, Percent_Identity=50.7154213036566, Blast_Score=646, Evalue=0.0, Organism=Homo sapiens, GI13375727, Length=645, Percent_Identity=36.5891472868217, Blast_Score=400, Evalue=1e-111, Organism=Homo sapiens, GI31982927, Length=635, Percent_Identity=24.4094488188976, Blast_Score=185, Evalue=2e-46, Organism=Homo sapiens, GI42544132, Length=544, Percent_Identity=27.9411764705882, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI38505220, Length=519, Percent_Identity=30.0578034682081, Blast_Score=179, Evalue=5e-45, Organism=Homo sapiens, GI115511026, Length=543, Percent_Identity=27.4401473296501, Blast_Score=174, Evalue=2e-43, Organism=Homo sapiens, GI122937307, Length=525, Percent_Identity=25.9047619047619, Blast_Score=172, Evalue=9e-43, Organism=Homo sapiens, GI58082049, Length=516, Percent_Identity=25.968992248062, Blast_Score=150, Evalue=4e-36, Organism=Homo sapiens, GI157311624, Length=516, Percent_Identity=25.1937984496124, Blast_Score=138, Evalue=2e-32, Organism=Homo sapiens, GI157311622, Length=516, Percent_Identity=25.1937984496124, Blast_Score=138, Evalue=2e-32, Organism=Homo sapiens, GI187761345, Length=389, Percent_Identity=25.4498714652956, Blast_Score=103, Evalue=7e-22, Organism=Homo sapiens, GI187761343, Length=389, Percent_Identity=25.4498714652956, Blast_Score=103, Evalue=7e-22, Organism=Homo sapiens, GI195947378, Length=438, Percent_Identity=25.3424657534247, Blast_Score=97, Evalue=5e-20, Organism=Homo sapiens, GI42544134, Length=362, Percent_Identity=24.8618784530387, Blast_Score=94, Evalue=5e-19, Organism=Homo sapiens, GI156151445, Length=549, Percent_Identity=22.4043715846995, Blast_Score=82, Evalue=2e-15, Organism=Escherichia coli, GI1790505, Length=649, Percent_Identity=72.5731895223421, Blast_Score=1026, Evalue=0.0, Organism=Escherichia coli, GI1786529, Length=636, Percent_Identity=35.6918238993711, Blast_Score=397, Evalue=1e-111, Organism=Escherichia coli, GI1788107, Length=564, Percent_Identity=22.8723404255319, Blast_Score=100, Evalue=3e-22, Organism=Escherichia coli, GI221142682, Length=515, Percent_Identity=22.3300970873786, Blast_Score=100, Evalue=3e-22, Organism=Escherichia coli, GI145693145, Length=125, Percent_Identity=33.6, Blast_Score=72, Evalue=9e-14, Organism=Caenorhabditis elegans, GI71983001, Length=645, Percent_Identity=50.2325581395349, Blast_Score=644, Evalue=0.0, Organism=Caenorhabditis elegans, GI71982997, Length=634, Percent_Identity=50.788643533123, Blast_Score=643, Evalue=0.0, Organism=Caenorhabditis elegans, GI17569507, Length=649, Percent_Identity=21.4175654853621, Blast_Score=134, Evalue=2e-31, Organism=Caenorhabditis elegans, GI17559526, Length=574, Percent_Identity=24.0418118466899, Blast_Score=99, Evalue=7e-21, Organism=Caenorhabditis elegans, GI17558820, Length=520, Percent_Identity=21.7307692307692, Blast_Score=89, Evalue=1e-17, Organism=Caenorhabditis elegans, GI32563687, Length=515, Percent_Identity=22.1359223300971, Blast_Score=84, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17557194, Length=552, Percent_Identity=21.195652173913, Blast_Score=82, Evalue=9e-16, Organism=Caenorhabditis elegans, GI17538037, Length=137, Percent_Identity=31.3868613138686, Blast_Score=77, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6323182, Length=639, Percent_Identity=48.0438184663537, Blast_Score=628, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6319264, Length=636, Percent_Identity=46.3836477987421, Blast_Score=578, Evalue=1e-166, Organism=Saccharomyces cerevisiae, GI6319699, Length=382, Percent_Identity=23.2984293193717, Blast_Score=96, Evalue=2e-20, Organism=Drosophila melanogaster, GI24667955, Length=661, Percent_Identity=52.3449319213313, Blast_Score=699, Evalue=0.0, Organism=Drosophila melanogaster, GI62472339, Length=559, Percent_Identity=56.350626118068, Blast_Score=649, Evalue=0.0, Organism=Drosophila melanogaster, GI24667959, Length=517, Percent_Identity=56.8665377176016, Blast_Score=606, Evalue=1e-173, Organism=Drosophila melanogaster, GI21355225, Length=647, Percent_Identity=34.4667697063369, Blast_Score=373, Evalue=1e-103, Organism=Drosophila melanogaster, GI18859661, Length=545, Percent_Identity=25.1376146788991, Blast_Score=112, Evalue=9e-25, Organism=Drosophila melanogaster, GI24656500, Length=531, Percent_Identity=23.9171374764595, Blast_Score=91, Evalue=2e-18, Organism=Drosophila melanogaster, GI28573631, Length=564, Percent_Identity=21.4539007092199, Blast_Score=88, Evalue=2e-17, Organism=Drosophila melanogaster, GI20130353, Length=564, Percent_Identity=21.4539007092199, Blast_Score=88, Evalue=2e-17, Organism=Drosophila melanogaster, GI21355181, Length=519, Percent_Identity=22.1579961464355, Blast_Score=81, Evalue=2e-15, Organism=Drosophila melanogaster, GI24581924, Length=524, Percent_Identity=20.8015267175573, Blast_Score=75, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011904 - InterPro: IPR020845 - InterPro: IPR000873 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: =6.2.1.1 [H]
Molecular weight: Translated: 71682; Mature: 71551
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: PS00455 AMP_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEIHVYPVNQDIANNAHADDDKYREMYQQSVINPEGFWREHGQIVDWMTPYTKVKNTSF CCCEEEEECCHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHCCCEEECCCCCHHHCCCCC DTGHVDIKWFEDGELNVSANCIDRHLATRGNDVAIIWEGDDPQDDASITFNELHEQVCKF CCCEEEEEEECCCCEEEEHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEHHHHHHHHHHH SNTLKSQGVRKGDVVCIYMPMVAEAAVAMLACTRIGAVHTVVFGGFSPEALAGRIIDSDA HHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHCEEECCCC KVVITADEGVRGGRTVPLKKNVDDALNNPDVTTIEKVVVFQRTGNDIEWSEGRDVWWHEA EEEEECCCCCCCCEEECCCCCHHHHCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEECH TAVASPHCEPEAMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAAITFKYIFDYQEGEV HCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEECCCEEEEHEEEEEEEEEECCCCE FWCTADVGWITGHTYLIYGPLANGAKTILFEGVPNYPSTSRMSEVVDKHNVNILYTAPTA EEEECCCCEEECCEEEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCEEEEECHHH IRALMAQGTEAVQGTSRSSLRVMGSVGEPINPEAWEWYYNTIGDARCPIVDTWWQTETGG HHHHHHCCCHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHCCCCCCCCEEECCCCCCCCC ILISPLPGATALKPGSATRPFFGVQPALVDNMGNIIEGATDGNLVITDSWPGQMRTIYGD EEEECCCCCCEECCCCCCCCCCCCCHHHHHCCHHHHCCCCCCCEEEECCCCCCEEEEECC HDRFEQTYFSTFKGMYFTSDGARRDEDGYYWITGRVDDVLNVSGHRMGTAEVESALVAFD HHHHHHHHHHHHCCEEEECCCCCCCCCCEEEEECCCCHHHCCCCCCCCHHHHHHHHHHHH KIAEAAIVGVPHDIKGQAIYAYITLNSGEIPSAELHKEVKDWVRKEIGPIATPDFLHWTD HHHHHEEECCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHCC SLPKTRSGKIMRRILRKIATGDTSNLGDTSTLADPSVVDKLIEEQRKIA CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure SEIHVYPVNQDIANNAHADDDKYREMYQQSVINPEGFWREHGQIVDWMTPYTKVKNTSF CCEEEEECCHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHCCCEEECCCCCHHHCCCCC DTGHVDIKWFEDGELNVSANCIDRHLATRGNDVAIIWEGDDPQDDASITFNELHEQVCKF CCCEEEEEEECCCCEEEEHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEHHHHHHHHHHH SNTLKSQGVRKGDVVCIYMPMVAEAAVAMLACTRIGAVHTVVFGGFSPEALAGRIIDSDA HHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHCEEECCCC KVVITADEGVRGGRTVPLKKNVDDALNNPDVTTIEKVVVFQRTGNDIEWSEGRDVWWHEA EEEEECCCCCCCCEEECCCCCHHHHCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEECH TAVASPHCEPEAMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAAITFKYIFDYQEGEV HCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEECCCEEEEHEEEEEEEEEECCCCE FWCTADVGWITGHTYLIYGPLANGAKTILFEGVPNYPSTSRMSEVVDKHNVNILYTAPTA EEEECCCCEEECCEEEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCEEEEECHHH IRALMAQGTEAVQGTSRSSLRVMGSVGEPINPEAWEWYYNTIGDARCPIVDTWWQTETGG HHHHHHCCCHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHCCCCCCCCEEECCCCCCCCC ILISPLPGATALKPGSATRPFFGVQPALVDNMGNIIEGATDGNLVITDSWPGQMRTIYGD EEEECCCCCCEECCCCCCCCCCCCCHHHHHCCHHHHCCCCCCCEEEECCCCCCEEEEECC HDRFEQTYFSTFKGMYFTSDGARRDEDGYYWITGRVDDVLNVSGHRMGTAEVESALVAFD HHHHHHHHHHHHCCEEEECCCCCCCCCCEEEEECCCCHHHCCCCCCCCHHHHHHHHHHHH KIAEAAIVGVPHDIKGQAIYAYITLNSGEIPSAELHKEVKDWVRKEIGPIATPDFLHWTD HHHHHEEECCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHCC SLPKTRSGKIMRRILRKIATGDTSNLGDTSTLADPSVVDKLIEEQRKIA CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA