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The map label for this gene is priB [H]

Identifier: 172087764

GI number: 172087764

Start: 2598089

End: 2598244

Strand: Reverse

Name: priB [H]

Synonym: VF_2656

Alternate gene names: 172087764

Gene position: 2598244-2598089 (Counterclockwise)

Preceding gene: 59712919

Following gene: 59712918

Centisome position: 89.67

GC content: 42.31

Gene sequence:

>156_bases
ATGAACGTGGTAGTGAGTGGACAAGGGTCACAAGCTTTAACTGCAAATTTAGCTCAAGGCAGTAACGTTACGGTAGGTGG
TTTTATCACATACCAGACAGGCCGAAATGGTGTGTCGAGAGTAGTGTTACATGCTGAGCATATTAAACTAATTTAG

Upstream 100 bases:

>100_bases
CGAAGTCTAAGTTCTTGCGGGCATACCTCATTGTCATTTTGTCATTGAGCATCGTTCGATTAAACAGGAAGCTGACTTAT
CACGACAAGTCTATTGCAGA

Downstream 100 bases:

>100_bases
ATCTGGAGATAGCCCATGGCTCGTTTCTTCCGTCGTCGTAAATTCTGCCGTTTTACTGCAGAAGGCGTACAAGAGATTGA
CTACAAAGACGTAGCAACTC

Product: primosomal replication protein N

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 51; Mature: 51

Protein sequence:

>51_residues
MNVVVSGQGSQALTANLAQGSNVTVGGFITYQTGRNGVSRVVLHAEHIKLI

Sequences:

>Translated_51_residues
MNVVVSGQGSQALTANLAQGSNVTVGGFITYQTGRNGVSRVVLHAEHIKLI
>Mature_51_residues
MNVVVSGQGSQALTANLAQGSNVTVGGFITYQTGRNGVSRVVLHAEHIKLI

Specific function: Binds single-stranded DNA at the primosome assembly site (PAS) [H]

COG id: COG2965

COG function: function code L; Primosomal replication protein N

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 5294; Mature: 5294

Theoretical pI: Translated: 10.45; Mature: 10.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVVVSGQGSQALTANLAQGSNVTVGGFITYQTGRNGVSRVVLHAEHIKLI
CEEEECCCCCCEEEEECCCCCCEEEEEEEEEECCCCCCEEEEEEEEEEEEC
>Mature Secondary Structure
MNVVVSGQGSQALTANLAQGSNVTVGGFITYQTGRNGVSRVVLHAEHIKLI
CEEEECCCCCCEEEEECCCCCCEEEEEEEEEECCCCCCEEEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12620739 [H]