| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 172087763
Identifier: 172087763
GI number: 172087763
Start: 2530458
End: 2530607
Strand: Reverse
Name: 172087763
Synonym: VF_2655
Alternate gene names: NA
Gene position: 2530607-2530458 (Counterclockwise)
Preceding gene: 59712867
Following gene: 59712856
Centisome position: 87.34
GC content: 28.67
Gene sequence:
>150_bases ATGAATAAAAAAGGATTATTGGCGATTGTTACTATATTAATTATTGTCGCAGTATGTACTTCAGGTTTAATGAGAGCGGC GATAGAACTATCAATATTTTTACTTTTGATGGGCTACTTATTCATCGTCAAAAAAAAGAAGATAAAATAA
Upstream 100 bases:
>100_bases ATTGATAGTGCAATTGGTTCTTTGATAGTGCGATTAGCTATTTTTCATTATTGAAAGGATCTTGAATAATAGTCTTTGGG TTATTTCTAGGATGGAGTAT
Downstream 100 bases:
>100_bases AAAGCAAAAAGGCTGATAAGTAAAAATACTCATCAGCCTTTTTTAATTTGGTGGCCCCTCCCAGATTTGAACTGGGGACC GAACGATTATGAGTCGTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 49; Mature: 49
Protein sequence:
>49_residues MNKKGLLAIVTILIIVAVCTSGLMRAAIELSIFLLLMGYLFIVKKKKIK
Sequences:
>Translated_49_residues MNKKGLLAIVTILIIVAVCTSGLMRAAIELSIFLLLMGYLFIVKKKKIK >Mature_49_residues MNKKGLLAIVTILIIVAVCTSGLMRAAIELSIFLLLMGYLFIVKKKKIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5421; Mature: 5421
Theoretical pI: Translated: 10.95; Mature: 10.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 6.1 %Met (Translated Protein) 8.2 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 6.1 %Met (Mature Protein) 8.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKKGLLAIVTILIIVAVCTSGLMRAAIELSIFLLLMGYLFIVKKKKIK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNKKGLLAIVTILIIVAVCTSGLMRAAIELSIFLLLMGYLFIVKKKKIK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA