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The map label for this gene is petA [H]

Identifier: 172087761

GI number: 172087761

Start: 2491495

End: 2492088

Strand: Reverse

Name: petA [H]

Synonym: VF_2220

Alternate gene names: 172087761

Gene position: 2492088-2491495 (Counterclockwise)

Preceding gene: 59712828

Following gene: 59712825

Centisome position: 86.01

GC content: 46.63

Gene sequence:

>594_bases
ATGAGCAATGCGCCAGTGAGTAATGGTCGACGTCGTTTCTTAACCGCCACAACTGCTGTTGTTGGTGGGCTAGGAGCTGC
TGCGGTGGCCGTACCTTTTATTAAATCTTGGAACCCGAGTGCAAAAGCGAAAGCTGCTGGTGCTCCGGTTGAAGTCGATA
TCAGTAAGCTCGAGGATGGGCAGATGGTTCGTGTTGAGTGGCGAGGAAAACCTGTATGGGTTGTTCGTCGTTCAGAAGCA
CTTTTACAATCATTAACTGAAATTGAGGGTCAACTTCGAGACCCGTCTTCTGGGGAAGAACAACAACCTGAATATGCTCA
AAATGCATATCGCTCAATTAAGCCAGAAATCTTTTTAGCAGTTGGCATCTGTACTCACCTTGGCTGTTCACCTACCTATT
TACCTGACAGTTTTAGTGAACAAGTTGAGGGGGTTAATTCTGGTTTCTTCTGCCCATGTCATGGCTCTAAATTTGATATG
GCGGGTCGAGTATTCCAAGGTGTTCCGGCACCTCTGAATCTTGTTGTTCCTAAGCACATGTACCTTAGTGATACTCGTAT
CCTAGTTGGGGTTGATGAAGGAGGGGAAGCCTAA

Upstream 100 bases:

>100_bases
AATAGTAAAGTTCTGTTGTATCACACCATTGAAAGTTAGCCGTAGCTCGTAAATGTATGGACATAATAAAAACCACATAG
AGCAAATGGGAGAAAGTTGG

Downstream 100 bases:

>100_bases
TGCAACCGTTACTTGATTGGGTAGAGAAGCGTCTGCCTGCGATGAATGCATATAAGAAGCATTTATCAGAGTACCCAATG
CCAAAAAACTTTAACTTTTG

Product: ubiquinol-cytochrome c reductase iron-sulfur subunit

Products: NA

Alternate protein names: Rieske iron-sulfur protein; RISP [H]

Number of amino acids: Translated: 197; Mature: 196

Protein sequence:

>197_residues
MSNAPVSNGRRRFLTATTAVVGGLGAAAVAVPFIKSWNPSAKAKAAGAPVEVDISKLEDGQMVRVEWRGKPVWVVRRSEA
LLQSLTEIEGQLRDPSSGEEQQPEYAQNAYRSIKPEIFLAVGICTHLGCSPTYLPDSFSEQVEGVNSGFFCPCHGSKFDM
AGRVFQGVPAPLNLVVPKHMYLSDTRILVGVDEGGEA

Sequences:

>Translated_197_residues
MSNAPVSNGRRRFLTATTAVVGGLGAAAVAVPFIKSWNPSAKAKAAGAPVEVDISKLEDGQMVRVEWRGKPVWVVRRSEA
LLQSLTEIEGQLRDPSSGEEQQPEYAQNAYRSIKPEIFLAVGICTHLGCSPTYLPDSFSEQVEGVNSGFFCPCHGSKFDM
AGRVFQGVPAPLNLVVPKHMYLSDTRILVGVDEGGEA
>Mature_196_residues
SNAPVSNGRRRFLTATTAVVGGLGAAAVAVPFIKSWNPSAKAKAAGAPVEVDISKLEDGQMVRVEWRGKPVWVVRRSEAL
LQSLTEIEGQLRDPSSGEEQQPEYAQNAYRSIKPEIFLAVGICTHLGCSPTYLPDSFSEQVEGVNSGFFCPCHGSKFDMA
GRVFQGVPAPLNLVVPKHMYLSDTRILVGVDEGGEA

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis [H]

COG id: COG0723

COG function: function code C; Rieske Fe-S protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Homo sapiens, GI163644321, Length=188, Percent_Identity=34.5744680851064, Blast_Score=108, Evalue=4e-24,
Organism=Caenorhabditis elegans, GI17540418, Length=185, Percent_Identity=34.5945945945946, Blast_Score=98, Evalue=2e-21,
Organism=Saccharomyces cerevisiae, GI6320811, Length=179, Percent_Identity=33.5195530726257, Blast_Score=101, Evalue=9e-23,
Organism=Drosophila melanogaster, GI24580896, Length=159, Percent_Identity=36.4779874213836, Blast_Score=105, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR014349
- InterPro:   IPR005805
- InterPro:   IPR019470
- InterPro:   IPR006317 [H]

Pfam domain/function: PF00355 Rieske; PF10399 UCR_Fe-S_N [H]

EC number: =1.10.2.2 [H]

Molecular weight: Translated: 21175; Mature: 21044

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: PS00199 RIESKE_1 ; PS00200 RIESKE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNAPVSNGRRRFLTATTAVVGGLGAAAVAVPFIKSWNPSAKAKAAGAPVEVDISKLEDG
CCCCCCCCCCEEEEEHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEHEECCCC
QMVRVEWRGKPVWVVRRSEALLQSLTEIEGQLRDPSSGEEQQPEYAQNAYRSIKPEIFLA
CEEEEEECCCEEEEEECHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCEEEEE
VGICTHLGCSPTYLPDSFSEQVEGVNSGFFCPCHGSKFDMAGRVFQGVPAPLNLVVPKHM
EEHHHHCCCCCCCCCCCHHHHHCCCCCCEEECCCCCCCCCCCHHHHCCCCCEEEECCCCE
YLSDTRILVGVDEGGEA
EECCCEEEEEECCCCCC
>Mature Secondary Structure 
SNAPVSNGRRRFLTATTAVVGGLGAAAVAVPFIKSWNPSAKAKAAGAPVEVDISKLEDG
CCCCCCCCCEEEEEHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEHEECCCC
QMVRVEWRGKPVWVVRRSEALLQSLTEIEGQLRDPSSGEEQQPEYAQNAYRSIKPEIFLA
CEEEEEECCCEEEEEECHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCEEEEE
VGICTHLGCSPTYLPDSFSEQVEGVNSGFFCPCHGSKFDMAGRVFQGVPAPLNLVVPKHM
EEHHHHCCCCCCCCCCCHHHHHCCCCCCEEECCCCCCCCCCCHHHHCCCCCEEEECCCCE
YLSDTRILVGVDEGGEA
EECCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA