Click here to switch to the map view.

The map label for this gene is 172087748

Identifier: 172087748

GI number: 172087748

Start: 2267022

End: 2267303

Strand: Direct

Name: 172087748

Synonym: VF_2648

Alternate gene names: NA

Gene position: 2267022-2267303 (Clockwise)

Preceding gene: 59712644

Following gene: 59712645

Centisome position: 78.24

GC content: 30.14

Gene sequence:

>282_bases
ATGGAACATGTAACTCAATTAACAAAAAAACACCTCGAAGATTTTTTTGACGATAAACTTCAAGATTATCAATGTCCTTG
CTGTAAATCCAAAGAAAAACCAGCAATTCCAACAGCGAACGATGAAGAAATATCTTTTAGTTTATTGGATTTAGTTGATA
TAGCTAAAAATAATTCAGAAAGCAAAAAAGTCTTATCTACACCTGCTTTACCTTTAATTTGCCAGAACTGCGGTAATATT
TATAACATTGCGACCTATGTTATTTTACGACATTTTTCATAA

Upstream 100 bases:

>100_bases
ATCATTCCTATTAATGGAAATTGCACAATTGTGGGTGTGGTTATCTCTTCAATGAAATTGTTTTAGTGTATTGAAATCAA
AAACGTTATGAGGTTCACCA

Downstream 100 bases:

>100_bases
AAGGCACCGCCATGAATAATAAAGTATCCTTTGTTGATTTCTCCCGTGGTGATAATATCACCGAACAATCAAAGAAAAAT
GGTAGCGGAGAACCACCAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 93; Mature: 93

Protein sequence:

>93_residues
MEHVTQLTKKHLEDFFDDKLQDYQCPCCKSKEKPAIPTANDEEISFSLLDLVDIAKNNSESKKVLSTPALPLICQNCGNI
YNIATYVILRHFS

Sequences:

>Translated_93_residues
MEHVTQLTKKHLEDFFDDKLQDYQCPCCKSKEKPAIPTANDEEISFSLLDLVDIAKNNSESKKVLSTPALPLICQNCGNI
YNIATYVILRHFS
>Mature_93_residues
MEHVTQLTKKHLEDFFDDKLQDYQCPCCKSKEKPAIPTANDEEISFSLLDLVDIAKNNSESKKVLSTPALPLICQNCGNI
YNIATYVILRHFS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10575; Mature: 10575

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
5.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEHVTQLTKKHLEDFFDDKLQDYQCPCCKSKEKPAIPTANDEEISFSLLDLVDIAKNNSE
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC
SKKVLSTPALPLICQNCGNIYNIATYVILRHFS
CHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MEHVTQLTKKHLEDFFDDKLQDYQCPCCKSKEKPAIPTANDEEISFSLLDLVDIAKNNSE
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC
SKKVLSTPALPLICQNCGNIYNIATYVILRHFS
CHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA