| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
Click here to switch to the map view.
The map label for this gene is 172087716
Identifier: 172087716
GI number: 172087716
Start: 1739933
End: 1740007
Strand: Reverse
Name: 172087716
Synonym: VF_2624
Alternate gene names: NA
Gene position: 1740007-1739933 (Counterclockwise)
Preceding gene: 59712163
Following gene: 59712162
Centisome position: 60.05
GC content: 34.67
Gene sequence:
>75_bases ATGATGGCGATCATTGCGAAAAATGATGATTTCAATTACGATCTGGCCGATTTTTTATTTGGATACTCAGTATGA
Upstream 100 bases:
>100_bases TAAATTAATGCCGCCAAATTAATGCCAGTGCTATTTATTGCGAAAAATTTAAAGCTTCTGTGATCAAGAAGCTTTTTTTA TGTTTGGATAAAGGACATCT
Downstream 100 bases:
>100_bases TTATAACGATGTTACTAAGTTTTGTTCTTATTGGGGCAGTATTATGGTGGTTTTATAGCCGTGGAAATGCCGCTTCTTTG AATCCTGTATGGATGATATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 24; Mature: 24
Protein sequence:
>24_residues MMAIIAKNDDFNYDLADFLFGYSV
Sequences:
>Translated_24_residues MMAIIAKNDDFNYDLADFLFGYSV >Mature_24_residues MMAIIAKNDDFNYDLADFLFGYSV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 2774; Mature: 2774
Theoretical pI: Translated: 3.66; Mature: 3.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 8.3 %Met (Translated Protein) 8.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 8.3 %Met (Mature Protein) 8.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMAIIAKNDDFNYDLADFLFGYSV CEEEEECCCCCCCCHHHHHHCCCC >Mature Secondary Structure MMAIIAKNDDFNYDLADFLFGYSV CEEEEECCCCCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA