Click here to switch to the map view.

The map label for this gene is 172087658

Identifier: 172087658

GI number: 172087658

Start: 384215

End: 384343

Strand: Direct

Name: 172087658

Synonym: VF_2587

Alternate gene names: NA

Gene position: 384215-384343 (Clockwise)

Preceding gene: 59710946

Following gene: 59710960

Centisome position: 13.26

GC content: 28.68

Gene sequence:

>129_bases
ATGATGAATAAACTTGTAAAGTTAGCGTTTAGTCAAAAAAATGACATCATATATTTTGATAGTTGGGAGCGCAATCTCAT
CTTTTGCGAACTTGATGAATTTTCTAATAAATTGAACGTTAAATTGTGA

Upstream 100 bases:

>100_bases
CAAATGCCTTTGTTAGGGTACGATAACTATCACTTATCATTTTTATATTTTGTTGTTTCATATCGCTCCTGGGCATTAGG
GGGAGTAATCACCATTATAA

Downstream 100 bases:

>100_bases
GAAATTACTCTCTAATTTTTATTACTATAGTATGCTTTCTCCGTTTAGGGGTATCAGATTTCACAATGAACGTGTTAGAC
TGATGACTACTGTATATATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 42; Mature: 42

Protein sequence:

>42_residues
MMNKLVKLAFSQKNDIIYFDSWERNLIFCELDEFSNKLNVKL

Sequences:

>Translated_42_residues
MMNKLVKLAFSQKNDIIYFDSWERNLIFCELDEFSNKLNVKL
>Mature_42_residues
MMNKLVKLAFSQKNDIIYFDSWERNLIFCELDEFSNKLNVKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5099; Mature: 5099

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNKLVKLAFSQKNDIIYFDSWERNLIFCELDEFSNKLNVKL
CCCHHEEEEECCCCCEEEEECCCCEEEEEEECCCCCEEEEEC
>Mature Secondary Structure
MMNKLVKLAFSQKNDIIYFDSWERNLIFCELDEFSNKLNVKL
CCCHHEEEEECCCCCEEEEECCCCEEEEEEECCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA