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The map label for this gene is yrdA [H]

Identifier: 58617587

GI number: 58617587

Start: 1376838

End: 1377356

Strand: Reverse

Name: yrdA [H]

Synonym: ERGA_CDS_08600

Alternate gene names: 58617587

Gene position: 1377356-1376838 (Counterclockwise)

Preceding gene: 58617589

Following gene: 58617586

Centisome position: 91.83

GC content: 34.3

Gene sequence:

>519_bases
ATGAATATATTCAATTATATGCAGATAATGCCTAATATAAGTGTTGATGCATTTGTTGCACCTACTGCTGTAATTATAGG
TGATGTTTGTGTAAATGACAAGTGTAGCATTTGGTATAACTCAGTATTACGTGGAGATGTAGGCCAAATTGTTATTGGTG
TAGGTACTAATATTCAAGATGGGACAATAATACATGTTGATAGGAAATATGGTAATACGAATATTGGCAAAAAAGTTACT
ATTGGGCATGGGTGTATATTACATGCTTGTGAGATACAAGATTATGTGCTTGTTGGAATGGGATCTATTATTATGGATAA
CGTTGTGGTTGAAAAGAATGCAATGGTAGCTGCTGGATCATTAGTTGTAAGAGGTAAAGTTGTGAAAACTGGTGAATTAT
GGGCTGGTAGGCCTGCACAATTGTTAAGAATGTTGTCTAGTGATGAAATTGAAGAGATAAGTAAATCTGCTGATAACTAT
ATAGAGCTTGCCAGTGATTACATAACCAGTAAGTTGTAA

Upstream 100 bases:

>100_bases
GTCAGGATTGCATTGACTAAGTATTTTTAATATAGATTTGTAGTAACTACTATGTAAAGTGCATTTTATATAATTTTAAA
TAAATAAAAAAGGTAAGATT

Downstream 100 bases:

>100_bases
TTTTAGTTACACTCAAAAGATAATTATCTGTATTGATTGAGAATTTACTAGTGTTTTTTTATTTTATATGAATCATATGC
TATGAATGAGTCTATATTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MNIFNYMQIMPNISVDAFVAPTAVIIGDVCVNDKCSIWYNSVLRGDVGQIVIGVGTNIQDGTIIHVDRKYGNTNIGKKVT
IGHGCILHACEIQDYVLVGMGSIIMDNVVVEKNAMVAAGSLVVRGKVVKTGELWAGRPAQLLRMLSSDEIEEISKSADNY
IELASDYITSKL

Sequences:

>Translated_172_residues
MNIFNYMQIMPNISVDAFVAPTAVIIGDVCVNDKCSIWYNSVLRGDVGQIVIGVGTNIQDGTIIHVDRKYGNTNIGKKVT
IGHGCILHACEIQDYVLVGMGSIIMDNVVVEKNAMVAAGSLVVRGKVVKTGELWAGRPAQLLRMLSSDEIEEISKSADNY
IELASDYITSKL
>Mature_172_residues
MNIFNYMQIMPNISVDAFVAPTAVIIGDVCVNDKCSIWYNSVLRGDVGQIVIGVGTNIQDGTIIHVDRKYGNTNIGKKVT
IGHGCILHACEIQDYVLVGMGSIIMDNVVVEKNAMVAAGSLVVRGKVVKTGELWAGRPAQLLRMLSSDEIEEISKSADNY
IELASDYITSKL

Specific function: Unknown

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082240, Length=169, Percent_Identity=41.4201183431953, Blast_Score=131, Evalue=2e-32,
Organism=Escherichia coli, GI87081681, Length=165, Percent_Identity=38.7878787878788, Blast_Score=106, Evalue=1e-24,
Organism=Escherichia coli, GI1787667, Length=160, Percent_Identity=35.625, Blast_Score=100, Evalue=5e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18648; Mature: 18648

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIFNYMQIMPNISVDAFVAPTAVIIGDVCVNDKCSIWYNSVLRGDVGQIVIGVGTNIQD
CCHHHHHHHCCCCCCCCEECCCEEEEEEEEECCCCHHHHHHHHCCCCCEEEEEECCCCCC
GTIIHVDRKYGNTNIGKKVTIGHGCILHACEIQDYVLVGMGSIIMDNVVVEKNAMVAAGS
CEEEEEECCCCCCCCCCEEEECCCEEEEEECCCCEEEECCCHHHHCCEEEECCCEEEECE
LVVRGKVVKTGELWAGRPAQLLRMLSSDEIEEISKSADNYIELASDYITSKL
EEEEEEEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNIFNYMQIMPNISVDAFVAPTAVIIGDVCVNDKCSIWYNSVLRGDVGQIVIGVGTNIQD
CCHHHHHHHCCCCCCCCEECCCEEEEEEEEECCCCHHHHHHHHCCCCCEEEEEECCCCCC
GTIIHVDRKYGNTNIGKKVTIGHGCILHACEIQDYVLVGMGSIIMDNVVVEKNAMVAAGS
CEEEEEECCCCCCCCCCEEEECCCEEEEEECCCCEEEECCCHHHHCCEEEECCCEEEECE
LVVRGKVVKTGELWAGRPAQLLRMLSSDEIEEISKSADNYIELASDYITSKL
EEEEEEEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 10493123 [H]