| Definition | Ehrlichia ruminantium str. Gardel, complete genome. |
|---|---|
| Accession | NC_006831 |
| Length | 1,499,920 |
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The map label for this gene is map [H]
Identifier: 58617582
GI number: 58617582
Start: 1367280
End: 1368080
Strand: Reverse
Name: map [H]
Synonym: ERGA_CDS_08550
Alternate gene names: 58617582
Gene position: 1368080-1367280 (Counterclockwise)
Preceding gene: 58617584
Following gene: 58617581
Centisome position: 91.21
GC content: 33.08
Gene sequence:
>801_bases ATGAGTAATTTTAATTCTGATATAACTATTTATAGCAAGGAAGATTTTCAATATATGCATAATGCTGGAAGACTTGCAGC TAAAGTTTTGGATTTTATTATTCCGTATGTACAGCCTGGAGTTTCTACTAATAAACTAAATGATTTATGTCATGATTTTA TTATCAATTCTGGAGCAATTCCAGCACCATTGGGATATAGAGGATATCCGAAGTCCATATGTACTTCCAAGAATTTTGTT GTATGTCACGGAATACCAGATGATTTACCTTTAAAAGATGGTGATATTTTGAACATAGATGTTACTGTTATATTAGATGG TTGGTATGGAGATACCAGTAGAATGTATTGGGTTGGTGAACCATCAATTAAAGCAAAACGTCTATGTGAAGCTACATATA ATGCGTTAAATGTAGCAATTGCTCAAGTATTTCCTGGGCAAAAGCTTAATCAAATTGGATTGGCTATCGAAAGAGAAATA AAAAAATATGGGTATTCAATAGTAAGAGATTACTGTGGTCATGGTTTAGGTCGTGTGTTTCATGATAAGCCTAGTGTGGT ACATTATTATGATGAAAATGATCCAGTTGTCATTAGAGAGGGAATGTTTTTTACGATAGAACCAATGATCAATCTTGGTA AACACCATACTGTTCTTAGTAAGGAAGATGGTTGGACTGTTAGAACAAGAGATTTTTCTTTATCTGCTCAGTTCGAACAT TCTTTAGGTGTAACTGAGAATGGTGTAGAAATATTTACCTTATCTCCAAAGAATTTGCATTATCCACCTTATGTATGTTG A
Upstream 100 bases:
>100_bases ATGAGTAGTTCGTGTTTTTGAGAAAATGATTATTTTTATGAAGTAAATAATTATATTATTGAGTATTATGATATTAACAA AAAAAATTTGTTAGGAAATT
Downstream 100 bases:
>100_bases TTTATAATGAATACTATAGCCTCTTTATTTAATAATGCTGTTGATTTTTTAAATAACCATAATATAGACAATCCAAAGCG TGATGTAGAAGTCATTATAA
Product: methionine aminopeptidase
Products: NA
Alternate protein names: MAP; Peptidase M [H]
Number of amino acids: Translated: 266; Mature: 265
Protein sequence:
>266_residues MSNFNSDITIYSKEDFQYMHNAGRLAAKVLDFIIPYVQPGVSTNKLNDLCHDFIINSGAIPAPLGYRGYPKSICTSKNFV VCHGIPDDLPLKDGDILNIDVTVILDGWYGDTSRMYWVGEPSIKAKRLCEATYNALNVAIAQVFPGQKLNQIGLAIEREI KKYGYSIVRDYCGHGLGRVFHDKPSVVHYYDENDPVVIREGMFFTIEPMINLGKHHTVLSKEDGWTVRTRDFSLSAQFEH SLGVTENGVEIFTLSPKNLHYPPYVC
Sequences:
>Translated_266_residues MSNFNSDITIYSKEDFQYMHNAGRLAAKVLDFIIPYVQPGVSTNKLNDLCHDFIINSGAIPAPLGYRGYPKSICTSKNFV VCHGIPDDLPLKDGDILNIDVTVILDGWYGDTSRMYWVGEPSIKAKRLCEATYNALNVAIAQVFPGQKLNQIGLAIEREI KKYGYSIVRDYCGHGLGRVFHDKPSVVHYYDENDPVVIREGMFFTIEPMINLGKHHTVLSKEDGWTVRTRDFSLSAQFEH SLGVTENGVEIFTLSPKNLHYPPYVC >Mature_265_residues SNFNSDITIYSKEDFQYMHNAGRLAAKVLDFIIPYVQPGVSTNKLNDLCHDFIINSGAIPAPLGYRGYPKSICTSKNFVV CHGIPDDLPLKDGDILNIDVTVILDGWYGDTSRMYWVGEPSIKAKRLCEATYNALNVAIAQVFPGQKLNQIGLAIEREIK KYGYSIVRDYCGHGLGRVFHDKPSVVHYYDENDPVVIREGMFFTIEPMINLGKHHTVLSKEDGWTVRTRDFSLSAQFEHS LGVTENGVEIFTLSPKNLHYPPYVC
Specific function: Removes the amino-terminal methionine from nascent proteins [H]
COG id: COG0024
COG function: function code J; Methionine aminopeptidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M24A family [H]
Homologues:
Organism=Homo sapiens, GI164420681, Length=249, Percent_Identity=42.9718875502008, Blast_Score=210, Evalue=8e-55, Organism=Homo sapiens, GI40385867, Length=255, Percent_Identity=40, Blast_Score=187, Evalue=1e-47, Organism=Escherichia coli, GI1786364, Length=249, Percent_Identity=55.8232931726908, Blast_Score=287, Evalue=5e-79, Organism=Caenorhabditis elegans, GI71996291, Length=247, Percent_Identity=41.2955465587045, Blast_Score=194, Evalue=3e-50, Organism=Saccharomyces cerevisiae, GI6323273, Length=253, Percent_Identity=43.0830039525692, Blast_Score=215, Evalue=7e-57, Organism=Drosophila melanogaster, GI21355531, Length=257, Percent_Identity=43.579766536965, Blast_Score=209, Evalue=2e-54, Organism=Drosophila melanogaster, GI24583427, Length=244, Percent_Identity=42.6229508196721, Blast_Score=201, Evalue=5e-52,
Paralogues:
None
Copy number: 3,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001714 - InterPro: IPR000994 - InterPro: IPR002467 [H]
Pfam domain/function: PF00557 Peptidase_M24 [H]
EC number: =3.4.11.18 [H]
Molecular weight: Translated: 29972; Mature: 29840
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: PS00680 MAP_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNFNSDITIYSKEDFQYMHNAGRLAAKVLDFIIPYVQPGVSTNKLNDLCHDFIINSGAI CCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC PAPLGYRGYPKSICTSKNFVVCHGIPDDLPLKDGDILNIDVTVILDGWYGDTSRMYWVGE CCCCCCCCCCHHHHCCCCEEEEECCCCCCCCCCCCEEEEEEEEEEECCCCCCCEEEEECC PSIKAKRLCEATYNALNVAIAQVFPGQKLNQIGLAIEREIKKYGYSIVRDYCGHGLGRVF CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHC HDKPSVVHYYDENDPVVIREGMFFTIEPMINLGKHHTVLSKEDGWTVRTRDFSLSAQFEH CCCCCEEEEECCCCCEEEECCCEEEEEHHHCCCCCCEEEECCCCCEEEEECEEEEEEECC SLGVTENGVEIFTLSPKNLHYPPYVC CCCCCCCCEEEEEECCCCCCCCCCCC >Mature Secondary Structure SNFNSDITIYSKEDFQYMHNAGRLAAKVLDFIIPYVQPGVSTNKLNDLCHDFIINSGAI CCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC PAPLGYRGYPKSICTSKNFVVCHGIPDDLPLKDGDILNIDVTVILDGWYGDTSRMYWVGE CCCCCCCCCCHHHHCCCCEEEEECCCCCCCCCCCCEEEEEEEEEEECCCCCCCEEEEECC PSIKAKRLCEATYNALNVAIAQVFPGQKLNQIGLAIEREIKKYGYSIVRDYCGHGLGRVF CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHC HDKPSVVHYYDENDPVVIREGMFFTIEPMINLGKHHTVLSKEDGWTVRTRDFSLSAQFEH CCCCCEEEEECCCCCEEEECCCEEEEEHHHCCCCCCEEEECCCCCEEEEECEEEEEEECC SLGVTENGVEIFTLSPKNLHYPPYVC CCCCCCCCEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]