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The map label for this gene is yfgC [H]

Identifier: 58617404

GI number: 58617404

Start: 1073457

End: 1074758

Strand: Reverse

Name: yfgC [H]

Synonym: ERGA_CDS_06770

Alternate gene names: 58617404

Gene position: 1074758-1073457 (Counterclockwise)

Preceding gene: 58617407

Following gene: 58617403

Centisome position: 71.65

GC content: 29.11

Gene sequence:

>1302_bases
ATGAATATAAAAATTTTACTATTCTCTGTAGTTATAATTATCCTACTTTATAGTAATGTGTCTTTTTGTCAGGAGAACTA
TACAATTTTTCGTGATAGTGAAGTGGAGTCTGTAATAAAAAAAATGGCATTCCCAATATTTGTTGCTGCGAAGATTAATC
CAGAAGCAGTTAGGGTATTCATTGTTGATGATAAGACGGTTAATGCTTATGTTACTGGAAATAATAATGACATATTTTTG
AATTATGGATTGTTTGAGTTTTCAAAAGATCCTAATGTTCTTATTGGAGTGTTAGCTCATGAAATTGGTCATATATCTCA
AAAACATGTTTTGCTACGTAAAGATAAAATACAAGATTCTATTATTATGTCTGGAATAGGTTATGTATTGGGCATTATTA
CTGCGATTACGGTAAATCCTGATGTTGGTCAGGCTATTGCCTTAGCTACCAATGATATTACAAAAAGGATGTTTTTTCTT
TATAGTCGTTTACAAGAAACAGCAGCAGATCAGTGTGCATTACGTTACCTAGATAGTGCTGGATATAGTAAAGAAGGATT
AATTAAAATGTTCAAACATTTTTACCTTTTAGAAGCACAATACAGAGGAAGTGTTGATCAATATTTATTATCTCATCCTC
TTAGTAGTGATAGGTTATTGCAGATGCAAAATTACCATAATGTTAATAAGGTTAATGGATTTGAAGATGGGGATGTCAAA
AAATTTCAGCGAATAGTGGAAAAAATGAATGCATTTTTTACACCTATAGATCTTTTATTAAATAATAATACAAGTATTGA
TCAATTGTCTCCGTATATGCAATCTATTATTTTTTATAGACAATCTAATGTTCCAAAGGCTTTAACAACGTTAGATAATA
TGATATCACAATCTCCAGAAGATCCTTATCTTTATGAATTGAAAGCACAGATTTTGTATAAAATTGGTGATATTAAGCAA
TCTATAGAGAATTATAAATTAGCTCTTCAGTTTTCTTCTGATGATATTTTAATGAAGCTTGAAATGTCACAAGCTTTATT
ATTGTATGATCAGAAAGAAGCAGTGAATTTTTTAGAACAAGTAATATATAAAGAGCCAGATAATGTGTTTGCATGGAAAC
AATTAGCCATAGGATATGGTATGATGGGAAATTTAGGAATGTCCTACTTTTCATTAGCAAACAAGTCTTTTTTTGAATAT
AATAAAAAAGATTTTGAAAAATATTTTAATTTAGCTCAGCGATATCTTCCAAAGGATAGTGTATATTTAGAACACATACG
CGATCTAAAAACTAATTTATGA

Upstream 100 bases:

>100_bases
TATATTAAGATTATCCTGTGTTATAGTGTAAGTATTAATTTTTTGATACATTATAAGCAATATTTATAGTATACTTTAAC
AAGTATAATTAGGTTAATTT

Downstream 100 bases:

>100_bases
AATCACTCTTAATATAATTATAGGTTATATTAGTTATTTTTTATTATGTGTGTATAAAAGTAAGTGTAGTAATGAACAAT
AGTAAATTGATAAATAGTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 433; Mature: 433

Protein sequence:

>433_residues
MNIKILLFSVVIIILLYSNVSFCQENYTIFRDSEVESVIKKMAFPIFVAAKINPEAVRVFIVDDKTVNAYVTGNNNDIFL
NYGLFEFSKDPNVLIGVLAHEIGHISQKHVLLRKDKIQDSIIMSGIGYVLGIITAITVNPDVGQAIALATNDITKRMFFL
YSRLQETAADQCALRYLDSAGYSKEGLIKMFKHFYLLEAQYRGSVDQYLLSHPLSSDRLLQMQNYHNVNKVNGFEDGDVK
KFQRIVEKMNAFFTPIDLLLNNNTSIDQLSPYMQSIIFYRQSNVPKALTTLDNMISQSPEDPYLYELKAQILYKIGDIKQ
SIENYKLALQFSSDDILMKLEMSQALLLYDQKEAVNFLEQVIYKEPDNVFAWKQLAIGYGMMGNLGMSYFSLANKSFFEY
NKKDFEKYFNLAQRYLPKDSVYLEHIRDLKTNL

Sequences:

>Translated_433_residues
MNIKILLFSVVIIILLYSNVSFCQENYTIFRDSEVESVIKKMAFPIFVAAKINPEAVRVFIVDDKTVNAYVTGNNNDIFL
NYGLFEFSKDPNVLIGVLAHEIGHISQKHVLLRKDKIQDSIIMSGIGYVLGIITAITVNPDVGQAIALATNDITKRMFFL
YSRLQETAADQCALRYLDSAGYSKEGLIKMFKHFYLLEAQYRGSVDQYLLSHPLSSDRLLQMQNYHNVNKVNGFEDGDVK
KFQRIVEKMNAFFTPIDLLLNNNTSIDQLSPYMQSIIFYRQSNVPKALTTLDNMISQSPEDPYLYELKAQILYKIGDIKQ
SIENYKLALQFSSDDILMKLEMSQALLLYDQKEAVNFLEQVIYKEPDNVFAWKQLAIGYGMMGNLGMSYFSLANKSFFEY
NKKDFEKYFNLAQRYLPKDSVYLEHIRDLKTNL
>Mature_433_residues
MNIKILLFSVVIIILLYSNVSFCQENYTIFRDSEVESVIKKMAFPIFVAAKINPEAVRVFIVDDKTVNAYVTGNNNDIFL
NYGLFEFSKDPNVLIGVLAHEIGHISQKHVLLRKDKIQDSIIMSGIGYVLGIITAITVNPDVGQAIALATNDITKRMFFL
YSRLQETAADQCALRYLDSAGYSKEGLIKMFKHFYLLEAQYRGSVDQYLLSHPLSSDRLLQMQNYHNVNKVNGFEDGDVK
KFQRIVEKMNAFFTPIDLLLNNNTSIDQLSPYMQSIIFYRQSNVPKALTTLDNMISQSPEDPYLYELKAQILYKIGDIKQ
SIENYKLALQFSSDDILMKLEMSQALLLYDQKEAVNFLEQVIYKEPDNVFAWKQLAIGYGMMGNLGMSYFSLANKSFFEY
NKKDFEKYFNLAQRYLPKDSVYLEHIRDLKTNL

Specific function: Unknown

COG id: COG4783

COG function: function code R; Putative Zn-dependent protease, contains TPR repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788840, Length=334, Percent_Identity=23.9520958083832, Blast_Score=86, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: NA

Molecular weight: Translated: 49859; Mature: 49859

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: PS50293 TPR_REGION ; PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIKILLFSVVIIILLYSNVSFCQENYTIFRDSEVESVIKKMAFPIFVAAKINPEAVRVF
CCEEEHHHHHHHHHHHHCCHHHHHCCCEEEECCHHHHHHHHHCCCEEEEEEECCCEEEEE
IVDDKTVNAYVTGNNNDIFLNYGLFEFSKDPNVLIGVLAHEIGHISQKHVLLRKDKIQDS
EEECCEEEEEEECCCCEEEEEECEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH
IIMSGIGYVLGIITAITVNPDVGQAIALATNDITKRMFFLYSRLQETAADQCALRYLDSA
HHHHHHHHHHHHHHHEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GYSKEGLIKMFKHFYLLEAQYRGSVDQYLLSHPLSSDRLLQMQNYHNVNKVNGFEDGDVK
CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCHH
KFQRIVEKMNAFFTPIDLLLNNNTSIDQLSPYMQSIIFYRQSNVPKALTTLDNMISQSPE
HHHHHHHHHHHHHCCHHHEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCC
DPYLYELKAQILYKIGDIKQSIENYKLALQFSSDDILMKLEMSQALLLYDQKEAVNFLEQ
CCHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCEEEEEECCCHHHEECHHHHHHHHHH
VIYKEPDNVFAWKQLAIGYGMMGNLGMSYFSLANKSFFEYNKKDFEKYFNLAQRYLPKDS
HHHCCCCCHHHHHHHHHCCCCHHHCCHHHHHHHCCHHHHCCHHHHHHHHHHHHHHCCCCH
VYLEHIRDLKTNL
HHHHHHHHHHHCC
>Mature Secondary Structure
MNIKILLFSVVIIILLYSNVSFCQENYTIFRDSEVESVIKKMAFPIFVAAKINPEAVRVF
CCEEEHHHHHHHHHHHHCCHHHHHCCCEEEECCHHHHHHHHHCCCEEEEEEECCCEEEEE
IVDDKTVNAYVTGNNNDIFLNYGLFEFSKDPNVLIGVLAHEIGHISQKHVLLRKDKIQDS
EEECCEEEEEEECCCCEEEEEECEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH
IIMSGIGYVLGIITAITVNPDVGQAIALATNDITKRMFFLYSRLQETAADQCALRYLDSA
HHHHHHHHHHHHHHHEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GYSKEGLIKMFKHFYLLEAQYRGSVDQYLLSHPLSSDRLLQMQNYHNVNKVNGFEDGDVK
CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCHH
KFQRIVEKMNAFFTPIDLLLNNNTSIDQLSPYMQSIIFYRQSNVPKALTTLDNMISQSPE
HHHHHHHHHHHHHCCHHHEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCC
DPYLYELKAQILYKIGDIKQSIENYKLALQFSSDDILMKLEMSQALLLYDQKEAVNFLEQ
CCHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCEEEEEECCCHHHEECHHHHHHHHHH
VIYKEPDNVFAWKQLAIGYGMMGNLGMSYFSLANKSFFEYNKKDFEKYFNLAQRYLPKDS
HHHCCCCCHHHHHHHHHCCCCHHHCCHHHHHHHCCHHHHCCHHHHHHHHHHHHHHCCCCH
VYLEHIRDLKTNL
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]