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The map label for this gene is yhcM [H]

Identifier: 58617368

GI number: 58617368

Start: 1005078

End: 1006151

Strand: Reverse

Name: yhcM [H]

Synonym: ERGA_CDS_06410

Alternate gene names: 58617368

Gene position: 1006151-1005078 (Counterclockwise)

Preceding gene: 58617369

Following gene: 161986607

Centisome position: 67.08

GC content: 28.49

Gene sequence:

>1074_bases
ATGAATAGAAAAAAAAATGAAGTTTTTACTACTTATTATTCTATGGTAGATAGTGGTAAAATTACTTATGATGAGCAACA
AGTTAATTTACTAGAAAAATTTTTACCTTATCTTACTGTACAAAATGTTTGTTCTTTTCTTCCAATAAAAAGGAGGTTGA
AAAAGGTTGGTGTATATGTACATGGTAAAGTTGGAAGGGGTAAGTCCATGGTTACAGACCTATATTACAATGTTTGTGGT
ATAGAAAATAAAAAAAGACAACATTTTAATCAGTTCATGAAGGAAATACATTCTTTATTACACGAATATAGATCATCTTA
TATAAAAGATCCACTTTATAAAGTTGCAAAAACAATGTGCTATAATGTGGATTTATTGTTTTTAGATGAAATTCAGGTAC
ATGATATTTGTGATGCCATGATATTATATAAGCTGTTTTCGATTATTTTTGAGCAGAAAGTTGTTGTAATGATGACTTCA
AATTATGCTCCTATTGATCTTTATCAAGATGGAATACAAAGGGAATCTTTTGAACCTGCTATATCATTAATAATGGATAG
AATGCATATTGTACATTTATCTGGAAAACAAGATTACCGGACTGTAAAAGATTTAGGAGTAGAGGATATATATTTTATAG
GTGATCATTCTTATGATAGTTTATCAAATCTGTTTATTAAGATGGTAAATAATAAAGAAGTGAAGTCTGTAAAGTTATAT
GTTTTAGGACGAGATATTAAAGTAAGTAAGGTATGCGGTGAGATTGCATGGTTTGATTTTCATGAACTGTGTGGCCAACC
TTTATGGGTTTCTGACTATCAGGAGATAGTTCGTAATTTTTCAGTGATATTTATTGCTGGAGTGCCTATTTTTAATTTCT
ATAATCATAATGAAATGAAAAGATTTACTATTTTAGTTGATGAGTTATATGAAAGTAAGACAAGAATTTTTTGTTCTTTA
GCTGCAGAACCTCAATCATTGTATTATTTATGTGATGTTCCTATAGATTTTCAACGTACAATCTCACGTTTAATGGAAAT
GAGATCTAAATCATATTATGATACTGCTAGGTAA

Upstream 100 bases:

>100_bases
AATCTGCAAGTTGAGATTTTGTTTATTCTAAATATAGAATAAAATATTGAAAATATAAAAATAGTTTGTCTAATAAGTTG
CCTTAGAAAATATTTATTTT

Downstream 100 bases:

>100_bases
TCATTTTTGATGTTTAATATGTTTATTTTTATAGCAGATGTTTAAATGTACTGATCTGAATTTATTATTGGATATAAGGT
ATCCATGAGTTCTCATATTA

Product: putative ATPase n2B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 357

Protein sequence:

>357_residues
MNRKKNEVFTTYYSMVDSGKITYDEQQVNLLEKFLPYLTVQNVCSFLPIKRRLKKVGVYVHGKVGRGKSMVTDLYYNVCG
IENKKRQHFNQFMKEIHSLLHEYRSSYIKDPLYKVAKTMCYNVDLLFLDEIQVHDICDAMILYKLFSIIFEQKVVVMMTS
NYAPIDLYQDGIQRESFEPAISLIMDRMHIVHLSGKQDYRTVKDLGVEDIYFIGDHSYDSLSNLFIKMVNNKEVKSVKLY
VLGRDIKVSKVCGEIAWFDFHELCGQPLWVSDYQEIVRNFSVIFIAGVPIFNFYNHNEMKRFTILVDELYESKTRIFCSL
AAEPQSLYYLCDVPIDFQRTISRLMEMRSKSYYDTAR

Sequences:

>Translated_357_residues
MNRKKNEVFTTYYSMVDSGKITYDEQQVNLLEKFLPYLTVQNVCSFLPIKRRLKKVGVYVHGKVGRGKSMVTDLYYNVCG
IENKKRQHFNQFMKEIHSLLHEYRSSYIKDPLYKVAKTMCYNVDLLFLDEIQVHDICDAMILYKLFSIIFEQKVVVMMTS
NYAPIDLYQDGIQRESFEPAISLIMDRMHIVHLSGKQDYRTVKDLGVEDIYFIGDHSYDSLSNLFIKMVNNKEVKSVKLY
VLGRDIKVSKVCGEIAWFDFHELCGQPLWVSDYQEIVRNFSVIFIAGVPIFNFYNHNEMKRFTILVDELYESKTRIFCSL
AAEPQSLYYLCDVPIDFQRTISRLMEMRSKSYYDTAR
>Mature_357_residues
MNRKKNEVFTTYYSMVDSGKITYDEQQVNLLEKFLPYLTVQNVCSFLPIKRRLKKVGVYVHGKVGRGKSMVTDLYYNVCG
IENKKRQHFNQFMKEIHSLLHEYRSSYIKDPLYKVAKTMCYNVDLLFLDEIQVHDICDAMILYKLFSIIFEQKVVVMMTS
NYAPIDLYQDGIQRESFEPAISLIMDRMHIVHLSGKQDYRTVKDLGVEDIYFIGDHSYDSLSNLFIKMVNNKEVKSVKLY
VLGRDIKVSKVCGEIAWFDFHELCGQPLWVSDYQEIVRNFSVIFIAGVPIFNFYNHNEMKRFTILVDELYESKTRIFCSL
AAEPQSLYYLCDVPIDFQRTISRLMEMRSKSYYDTAR

Specific function: Unknown

COG id: COG1485

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AFG1 ATPase family [H]

Homologues:

Organism=Homo sapiens, GI21918872, Length=346, Percent_Identity=33.5260115606936, Blast_Score=197, Evalue=1e-50,
Organism=Escherichia coli, GI1789627, Length=298, Percent_Identity=30.8724832214765, Blast_Score=150, Evalue=9e-38,
Organism=Caenorhabditis elegans, GI17505769, Length=279, Percent_Identity=35.4838709677419, Blast_Score=184, Evalue=5e-47,
Organism=Saccharomyces cerevisiae, GI6320783, Length=314, Percent_Identity=32.484076433121, Blast_Score=149, Evalue=7e-37,
Organism=Drosophila melanogaster, GI20129913, Length=345, Percent_Identity=30.4347826086957, Blast_Score=166, Evalue=2e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005654 [H]

Pfam domain/function: PF03969 AFG1_ATPase [H]

EC number: NA

Molecular weight: Translated: 42091; Mature: 42091

Theoretical pI: Translated: 7.99; Mature: 7.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRKKNEVFTTYYSMVDSGKITYDEQQVNLLEKFLPYLTVQNVCSFLPIKRRLKKVGVYV
CCCCHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEE
HGKVGRGKSMVTDLYYNVCGIENKKRQHFNQFMKEIHSLLHEYRSSYIKDPLYKVAKTMC
EECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
YNVDLLFLDEIQVHDICDAMILYKLFSIIFEQKVVVMMTSNYAPIDLYQDGIQRESFEPA
HCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHCCCCCCCHHH
ISLIMDRMHIVHLSGKQDYRTVKDLGVEDIYFIGDHSYDSLSNLFIKMVNNKEVKSVKLY
HHHHHHHHHEEEECCCCHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEE
VLGRDIKVSKVCGEIAWFDFHELCGQPLWVSDYQEIVRNFSVIFIAGVPIFNFYNHNEMK
EEECCCCHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHCCCEEEEECCCEEECCCCCCHH
RFTILVDELYESKTRIFCSLAAEPQSLYYLCDVPIDFQRTISRLMEMRSKSYYDTAR
HHHHHHHHHHCCHHEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MNRKKNEVFTTYYSMVDSGKITYDEQQVNLLEKFLPYLTVQNVCSFLPIKRRLKKVGVYV
CCCCHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEE
HGKVGRGKSMVTDLYYNVCGIENKKRQHFNQFMKEIHSLLHEYRSSYIKDPLYKVAKTMC
EECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
YNVDLLFLDEIQVHDICDAMILYKLFSIIFEQKVVVMMTSNYAPIDLYQDGIQRESFEPA
HCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHCCCCCCCHHH
ISLIMDRMHIVHLSGKQDYRTVKDLGVEDIYFIGDHSYDSLSNLFIKMVNNKEVKSVKLY
HHHHHHHHHEEEECCCCHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEE
VLGRDIKVSKVCGEIAWFDFHELCGQPLWVSDYQEIVRNFSVIFIAGVPIFNFYNHNEMK
EEECCCCHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHCCCEEEEECCCEEECCCCCCHH
RFTILVDELYESKTRIFCSLAAEPQSLYYLCDVPIDFQRTISRLMEMRSKSYYDTAR
HHHHHHHHHHCCHHEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]