| Definition | Ehrlichia ruminantium str. Gardel, complete genome. |
|---|---|
| Accession | NC_006831 |
| Length | 1,499,920 |
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The map label for this gene is nuoM [H]
Identifier: 58617286
GI number: 58617286
Start: 912509
End: 914095
Strand: Reverse
Name: nuoM [H]
Synonym: ERGA_CDS_05590
Alternate gene names: 58617286
Gene position: 914095-912509 (Counterclockwise)
Preceding gene: 58617293
Following gene: 58617285
Centisome position: 60.94
GC content: 26.97
Gene sequence:
>1587_bases GTGACTATGGGTAAGTATGTTATTGACTTAGTTATGAGTTTCTTTGACTTATTTTCTATAACATTGAGTGATTTATTATA TAAGATAGAAAGCAGTTTGTATTTTTATAATACAGTCTTATTTTTTGTATTTTCTTTAATTATTACTCTAATTTTTCTAT ATATTTCACAAATAAAGAAGCAAGAGATAATTTTATACCTTTTGTATTATTTAAGTAGTGTAATAGCCATTTCTGCTGAA AGTTTGCTAAAATTTGTTATTTCTTTTGAAATTATGGCATTAAGTGCAGTTATGATAATTGCTACTGGATCTAATGGAAA AAATATGCATCAGGTTATACATTACTCTTATATTCATTTTTTTGCTGGAGTACTATTGTTAGTTGGTGCATCTGGTAATG TGGTTGAATTATCTATAGATTATAACAGCTATTGTAAATTATTTTTGTTAATAGGAATATTAATTAATTGTGCATCTTTC CCTATGTCATCTTGGGTACCTGATGCATATTCTTCAACAGCTAATAATGGAATTATAGTATTATCTGTTTTTACAACTAA AGTTGCAGCTTTTGCGTTACTATCTTTTTTTCAAGGAGAAGAGATATTATTGTTTTTAGGTATTACAACTGCTATTTATG GAATAGTTTTTTCTATATTAGAAAACAATATTAAGCGTTTACTTTGTTACAACTTAGTTGGGCAAATGGGATTAGTTATT ACTGCTGTAGGTTTTTCATATAGTAGTGGAGTATCTGTTCGTAGTATAATTGTATTTCAGATAGTGTTGTCTATGATATA TCAAACTTTATTGTTTATAGTTGCTATGTCTGTGATAAATAATACTAGAAAATTTAATCTTAATGAAATTGGTGGATTAT TAAAAAAGATGCCATTAGAGGCTATATGTTCTGCGATTGCTATATTAAATATGGGAGCATTCCCTGGGACAGCAGGTTTT ATATCTAAGTTTCTTGTAAGTCATAGTATAGATACTACAGATATGACTAACGCAATAGTGAGTAAGTTATTTTTAGTATG TAGTACTTTGTTGTTTGTTAGTGTTGGTCTAAAATTTTTTTGGTTTGCATTTCTCTCTAAACCGAGAGATGGTTTTATTT TTAATCAGATGAAGCAAAATATTGGTGCAAGAGTCTCAATGGTTGTACTAGTATTGATTTGTATTCTTTTAGGAATATAT GGAAGTTATCATCTTTTCTATAATTTAAGTTATGAACAATTACATAGTGTAATATTACAGGGTGGTATAATAATTGGCAG TGTACTGTTATTTATTTGTTTTTGTTCCTTTTTTAAAGGAAGAATCAATTTTACTATGGAATTAGATTGGTTTTACAGAA TTTTGTTAGCTCGTTTTATGTTATTTATTGGTGATTTTTTATTGTATGTTTCTGGTATTATTGTTAGCATAGTAAGTGAT GTGTTGAATTGTAGTACATTATTGTTATGTGAAACTCATGGAAAAGTGGTGAACATATCAAATATGAAATCTTTAGGATT TGCTATAATATTACCTATGTTATTTATTATTATTATGGTTAGTGTATATTTATGTTTGAATCTTTAA
Upstream 100 bases:
>100_bases TATGGTATATTTTCCTTTATATAATTTATAATGCTATTTGTTGCTATGTAATAATTAGTATTAGTATGATATATACGGAA GTAGGTAATAGTACTATAGA
Downstream 100 bases:
>100_bases CTAGTAGTTTAACTGCAGTTCTCCAGAAGATGCAGAGTAAACATGTTATCTCTTCTGAGGATTTTGATTCTGTTATGGAA GAGGTTAAGGTAGCTTTACT
Product: putative monovalent cation/H+ antiporter subunit D
Products: H2; oxidized ferredoxin [C]
Alternate protein names: NA
Number of amino acids: Translated: 528; Mature: 527
Protein sequence:
>528_residues MTMGKYVIDLVMSFFDLFSITLSDLLYKIESSLYFYNTVLFFVFSLIITLIFLYISQIKKQEIILYLLYYLSSVIAISAE SLLKFVISFEIMALSAVMIIATGSNGKNMHQVIHYSYIHFFAGVLLLVGASGNVVELSIDYNSYCKLFLLIGILINCASF PMSSWVPDAYSSTANNGIIVLSVFTTKVAAFALLSFFQGEEILLFLGITTAIYGIVFSILENNIKRLLCYNLVGQMGLVI TAVGFSYSSGVSVRSIIVFQIVLSMIYQTLLFIVAMSVINNTRKFNLNEIGGLLKKMPLEAICSAIAILNMGAFPGTAGF ISKFLVSHSIDTTDMTNAIVSKLFLVCSTLLFVSVGLKFFWFAFLSKPRDGFIFNQMKQNIGARVSMVVLVLICILLGIY GSYHLFYNLSYEQLHSVILQGGIIIGSVLLFICFCSFFKGRINFTMELDWFYRILLARFMLFIGDFLLYVSGIIVSIVSD VLNCSTLLLCETHGKVVNISNMKSLGFAIILPMLFIIIMVSVYLCLNL
Sequences:
>Translated_528_residues MTMGKYVIDLVMSFFDLFSITLSDLLYKIESSLYFYNTVLFFVFSLIITLIFLYISQIKKQEIILYLLYYLSSVIAISAE SLLKFVISFEIMALSAVMIIATGSNGKNMHQVIHYSYIHFFAGVLLLVGASGNVVELSIDYNSYCKLFLLIGILINCASF PMSSWVPDAYSSTANNGIIVLSVFTTKVAAFALLSFFQGEEILLFLGITTAIYGIVFSILENNIKRLLCYNLVGQMGLVI TAVGFSYSSGVSVRSIIVFQIVLSMIYQTLLFIVAMSVINNTRKFNLNEIGGLLKKMPLEAICSAIAILNMGAFPGTAGF ISKFLVSHSIDTTDMTNAIVSKLFLVCSTLLFVSVGLKFFWFAFLSKPRDGFIFNQMKQNIGARVSMVVLVLICILLGIY GSYHLFYNLSYEQLHSVILQGGIIIGSVLLFICFCSFFKGRINFTMELDWFYRILLARFMLFIGDFLLYVSGIIVSIVSD VLNCSTLLLCETHGKVVNISNMKSLGFAIILPMLFIIIMVSVYLCLNL >Mature_527_residues TMGKYVIDLVMSFFDLFSITLSDLLYKIESSLYFYNTVLFFVFSLIITLIFLYISQIKKQEIILYLLYYLSSVIAISAES LLKFVISFEIMALSAVMIIATGSNGKNMHQVIHYSYIHFFAGVLLLVGASGNVVELSIDYNSYCKLFLLIGILINCASFP MSSWVPDAYSSTANNGIIVLSVFTTKVAAFALLSFFQGEEILLFLGITTAIYGIVFSILENNIKRLLCYNLVGQMGLVIT AVGFSYSSGVSVRSIIVFQIVLSMIYQTLLFIVAMSVINNTRKFNLNEIGGLLKKMPLEAICSAIAILNMGAFPGTAGFI SKFLVSHSIDTTDMTNAIVSKLFLVCSTLLFVSVGLKFFWFAFLSKPRDGFIFNQMKQNIGARVSMVVLVLICILLGIYG SYHLFYNLSYEQLHSVILQGGIIIGSVLLFICFCSFFKGRINFTMELDWFYRILLARFMLFIGDFLLYVSGIIVSIVSDV LNCSTLLLCETHGKVVNISNMKSLGFAIILPMLFIIIMVSVYLCLNL
Specific function: Unknown
COG id: COG0651
COG function: function code CP; Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the complex I subunit 5 family [H]
Homologues:
Organism=Escherichia coli, GI1788827, Length=359, Percent_Identity=22.5626740947075, Blast_Score=90, Evalue=4e-19, Organism=Escherichia coli, GI2367154, Length=379, Percent_Identity=23.4828496042216, Blast_Score=77, Evalue=4e-15, Organism=Escherichia coli, GI1788613, Length=178, Percent_Identity=28.0898876404494, Blast_Score=73, Evalue=5e-14, Organism=Escherichia coli, GI1788831, Length=188, Percent_Identity=28.7234042553192, Blast_Score=66, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001750 - InterPro: IPR003918 [H]
Pfam domain/function: PF00361 Oxidored_q1 [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 58931; Mature: 58799
Theoretical pI: Translated: 8.18; Mature: 8.18
Prosite motif: PS00989 CLAT_ADAPTOR_S
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMGKYVIDLVMSFFDLFSITLSDLLYKIESSLYFYNTVLFFVFSLIITLIFLYISQIKK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QEIILYLLYYLSSVIAISAESLLKFVISFEIMALSAVMIIATGSNGKNMHQVIHYSYIHF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHH FAGVLLLVGASGNVVELSIDYNSYCKLFLLIGILINCASFPMSSWVPDAYSSTANNGIIV HHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCEEE LSVFTTKVAAFALLSFFQGEEILLFLGITTAIYGIVFSILENNIKRLLCYNLVGQMGLVI EEHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TAVGFSYSSGVSVRSIIVFQIVLSMIYQTLLFIVAMSVINNTRKFNLNEIGGLLKKMPLE HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHH AICSAIAILNMGAFPGTAGFISKFLVSHSIDTTDMTNAIVSKLFLVCSTLLFVSVGLKFF HHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH WFAFLSKPRDGFIFNQMKQNIGARVSMVVLVLICILLGIYGSYHLFYNLSYEQLHSVILQ HHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCHHEEECCHHHHHHHHHH GGIIIGSVLLFICFCSFFKGRINFTMELDWFYRILLARFMLFIGDFLLYVSGIIVSIVSD CHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLNCSTLLLCETHGKVVNISNMKSLGFAIILPMLFIIIMVSVYLCLNL HHCCHHEEEEECCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TMGKYVIDLVMSFFDLFSITLSDLLYKIESSLYFYNTVLFFVFSLIITLIFLYISQIKK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QEIILYLLYYLSSVIAISAESLLKFVISFEIMALSAVMIIATGSNGKNMHQVIHYSYIHF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHH FAGVLLLVGASGNVVELSIDYNSYCKLFLLIGILINCASFPMSSWVPDAYSSTANNGIIV HHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCEEE LSVFTTKVAAFALLSFFQGEEILLFLGITTAIYGIVFSILENNIKRLLCYNLVGQMGLVI EEHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TAVGFSYSSGVSVRSIIVFQIVLSMIYQTLLFIVAMSVINNTRKFNLNEIGGLLKKMPLE HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHH AICSAIAILNMGAFPGTAGFISKFLVSHSIDTTDMTNAIVSKLFLVCSTLLFVSVGLKFF HHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH WFAFLSKPRDGFIFNQMKQNIGARVSMVVLVLICILLGIYGSYHLFYNLSYEQLHSVILQ HHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCHHEEECCHHHHHHHHHH GGIIIGSVLLFICFCSFFKGRINFTMELDWFYRILLARFMLFIGDFLLYVSGIIVSIVSD CHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLNCSTLLLCETHGKVVNISNMKSLGFAIILPMLFIIIMVSVYLCLNL HHCCHHEEEEECCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton; reduced ferredoxin [C]
Specific reaction: Proton + reduced ferredoxin = H2 + oxidized ferredoxin [C]
General reaction: Oxidoreductases [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503; 2016588 [H]