Definition Ehrlichia ruminantium str. Gardel, complete genome.
Accession NC_006831
Length 1,499,920

Click here to switch to the map view.

The map label for this gene is 58617246

Identifier: 58617246

GI number: 58617246

Start: 833103

End: 833975

Strand: Reverse

Name: 58617246

Synonym: ERGA_CDS_05190

Alternate gene names: NA

Gene position: 833975-833103 (Counterclockwise)

Preceding gene: 58617247

Following gene: 58617245

Centisome position: 55.6

GC content: 27.61

Gene sequence:

>873_bases
ATGCCACTTTTAAAGAATACAGCTCGTACAGCTGGTGTAGTAGGCAGCTTTGCATGTTTAATCTTTGTTGGAAATGTATT
AATGCGATATTTTTGCAATAAAAATAGCAATGCTGTAATTGCGGTAATGTCATTCTTAAGTGTTGGCATTGTAATGTTTT
TTTCAATATATGGTAGTAATAAAGACCCATTAACATTTACAAAATTCAAGGTATACGGGATATTATTGGCCAGTGCTTTA
ATAATGTTCTGTATTACTAATATAATATTGAGGAAAGAGTCTGTTGAGTATAATCAACTAAAGAAGCAAAAACAGTCTAT
ACATGCTTTGGAAGTTAAGATAATTAATTTAAAGATACGGTTAAGTGCTATAAAAAGAGAAACAGAACTGCATTTTAGTG
GTTTTGCTTGTAATGATCAGATTTGTACTGATATACAAAAGGAGTGCTTATTACCGCGTAATATGCAGTATTATGATTAC
TATGCTTCTTATCGTGTAATAAATTTAATAATATTTAGTATAGCATTGTTAATTTTTTTATCTCAATCGTTTCATAGTGC
AATGTTTGAGATGTCTGATTTAACAGATTTGTTTTTATATGGTGTTATGGTATCATGTTTGTTAATTATGTTTCTTATTG
ATCAATTATTACTTTATGATGTTAAGAATGAATTGAAGATTAGTGAACAAGATTATCCAGAAATTAAGAAGTCTTTAAAT
GATAAATTTGTGGAGATAGATAAGCAATATTGCAAATTAGTTAAAGAGATTTCAGATTATAATATGTTAAGTAGTACAAA
AATCACTGAAGCTAATGTTGAAAAATTAGAAAAATGCAAGAGTAAGATATTAAGTATTTTGAATCAAGTTTAG

Upstream 100 bases:

>100_bases
TTTCGTTATACACTAATAATATATAAAAAATAATAATTATAGTTACGATATTAAAAAAATATGCTACAATAAATATAATA
TTGCATAAACAAGGAATATT

Downstream 100 bases:

>100_bases
AAGATTATTGGTTTAAAATTGTATTTTAAGAATAATGTTTATTGTTTACAGTAGAATGTCAGTTTATTGTAAATCTAAAT
TTATTTGAATTACCTAACAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 290; Mature: 289

Protein sequence:

>290_residues
MPLLKNTARTAGVVGSFACLIFVGNVLMRYFCNKNSNAVIAVMSFLSVGIVMFFSIYGSNKDPLTFTKFKVYGILLASAL
IMFCITNIILRKESVEYNQLKKQKQSIHALEVKIINLKIRLSAIKRETELHFSGFACNDQICTDIQKECLLPRNMQYYDY
YASYRVINLIIFSIALLIFLSQSFHSAMFEMSDLTDLFLYGVMVSCLLIMFLIDQLLLYDVKNELKISEQDYPEIKKSLN
DKFVEIDKQYCKLVKEISDYNMLSSTKITEANVEKLEKCKSKILSILNQV

Sequences:

>Translated_290_residues
MPLLKNTARTAGVVGSFACLIFVGNVLMRYFCNKNSNAVIAVMSFLSVGIVMFFSIYGSNKDPLTFTKFKVYGILLASAL
IMFCITNIILRKESVEYNQLKKQKQSIHALEVKIINLKIRLSAIKRETELHFSGFACNDQICTDIQKECLLPRNMQYYDY
YASYRVINLIIFSIALLIFLSQSFHSAMFEMSDLTDLFLYGVMVSCLLIMFLIDQLLLYDVKNELKISEQDYPEIKKSLN
DKFVEIDKQYCKLVKEISDYNMLSSTKITEANVEKLEKCKSKILSILNQV
>Mature_289_residues
PLLKNTARTAGVVGSFACLIFVGNVLMRYFCNKNSNAVIAVMSFLSVGIVMFFSIYGSNKDPLTFTKFKVYGILLASALI
MFCITNIILRKESVEYNQLKKQKQSIHALEVKIINLKIRLSAIKRETELHFSGFACNDQICTDIQKECLLPRNMQYYDYY
ASYRVINLIIFSIALLIFLSQSFHSAMFEMSDLTDLFLYGVMVSCLLIMFLIDQLLLYDVKNELKISEQDYPEIKKSLND
KFVEIDKQYCKLVKEISDYNMLSSTKITEANVEKLEKCKSKILSILNQV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33321; Mature: 33190

Theoretical pI: Translated: 8.59; Mature: 8.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLLKNTARTAGVVGSFACLIFVGNVLMRYFCNKNSNAVIAVMSFLSVGIVMFFSIYGSN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC
KDPLTFTKFKVYGILLASALIMFCITNIILRKESVEYNQLKKQKQSIHALEVKIINLKIR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEEEEEEEE
LSAIKRETELHFSGFACNDQICTDIQKECLLPRNMQYYDYYASYRVINLIIFSIALLIFL
HHHHHHHHHHEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SQSFHSAMFEMSDLTDLFLYGVMVSCLLIMFLIDQLLLYDVKNELKISEQDYPEIKKSLN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
DKFVEIDKQYCKLVKEISDYNMLSSTKITEANVEKLEKCKSKILSILNQV
HHHHHHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PLLKNTARTAGVVGSFACLIFVGNVLMRYFCNKNSNAVIAVMSFLSVGIVMFFSIYGSN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC
KDPLTFTKFKVYGILLASALIMFCITNIILRKESVEYNQLKKQKQSIHALEVKIINLKIR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEEEEEEEE
LSAIKRETELHFSGFACNDQICTDIQKECLLPRNMQYYDYYASYRVINLIIFSIALLIFL
HHHHHHHHHHEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SQSFHSAMFEMSDLTDLFLYGVMVSCLLIMFLIDQLLLYDVKNELKISEQDYPEIKKSLN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
DKFVEIDKQYCKLVKEISDYNMLSSTKITEANVEKLEKCKSKILSILNQV
HHHHHHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA