| Definition | Ehrlichia ruminantium str. Gardel, complete genome. |
|---|---|
| Accession | NC_006831 |
| Length | 1,499,920 |
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The map label for this gene is 58617246
Identifier: 58617246
GI number: 58617246
Start: 833103
End: 833975
Strand: Reverse
Name: 58617246
Synonym: ERGA_CDS_05190
Alternate gene names: NA
Gene position: 833975-833103 (Counterclockwise)
Preceding gene: 58617247
Following gene: 58617245
Centisome position: 55.6
GC content: 27.61
Gene sequence:
>873_bases ATGCCACTTTTAAAGAATACAGCTCGTACAGCTGGTGTAGTAGGCAGCTTTGCATGTTTAATCTTTGTTGGAAATGTATT AATGCGATATTTTTGCAATAAAAATAGCAATGCTGTAATTGCGGTAATGTCATTCTTAAGTGTTGGCATTGTAATGTTTT TTTCAATATATGGTAGTAATAAAGACCCATTAACATTTACAAAATTCAAGGTATACGGGATATTATTGGCCAGTGCTTTA ATAATGTTCTGTATTACTAATATAATATTGAGGAAAGAGTCTGTTGAGTATAATCAACTAAAGAAGCAAAAACAGTCTAT ACATGCTTTGGAAGTTAAGATAATTAATTTAAAGATACGGTTAAGTGCTATAAAAAGAGAAACAGAACTGCATTTTAGTG GTTTTGCTTGTAATGATCAGATTTGTACTGATATACAAAAGGAGTGCTTATTACCGCGTAATATGCAGTATTATGATTAC TATGCTTCTTATCGTGTAATAAATTTAATAATATTTAGTATAGCATTGTTAATTTTTTTATCTCAATCGTTTCATAGTGC AATGTTTGAGATGTCTGATTTAACAGATTTGTTTTTATATGGTGTTATGGTATCATGTTTGTTAATTATGTTTCTTATTG ATCAATTATTACTTTATGATGTTAAGAATGAATTGAAGATTAGTGAACAAGATTATCCAGAAATTAAGAAGTCTTTAAAT GATAAATTTGTGGAGATAGATAAGCAATATTGCAAATTAGTTAAAGAGATTTCAGATTATAATATGTTAAGTAGTACAAA AATCACTGAAGCTAATGTTGAAAAATTAGAAAAATGCAAGAGTAAGATATTAAGTATTTTGAATCAAGTTTAG
Upstream 100 bases:
>100_bases TTTCGTTATACACTAATAATATATAAAAAATAATAATTATAGTTACGATATTAAAAAAATATGCTACAATAAATATAATA TTGCATAAACAAGGAATATT
Downstream 100 bases:
>100_bases AAGATTATTGGTTTAAAATTGTATTTTAAGAATAATGTTTATTGTTTACAGTAGAATGTCAGTTTATTGTAAATCTAAAT TTATTTGAATTACCTAACAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MPLLKNTARTAGVVGSFACLIFVGNVLMRYFCNKNSNAVIAVMSFLSVGIVMFFSIYGSNKDPLTFTKFKVYGILLASAL IMFCITNIILRKESVEYNQLKKQKQSIHALEVKIINLKIRLSAIKRETELHFSGFACNDQICTDIQKECLLPRNMQYYDY YASYRVINLIIFSIALLIFLSQSFHSAMFEMSDLTDLFLYGVMVSCLLIMFLIDQLLLYDVKNELKISEQDYPEIKKSLN DKFVEIDKQYCKLVKEISDYNMLSSTKITEANVEKLEKCKSKILSILNQV
Sequences:
>Translated_290_residues MPLLKNTARTAGVVGSFACLIFVGNVLMRYFCNKNSNAVIAVMSFLSVGIVMFFSIYGSNKDPLTFTKFKVYGILLASAL IMFCITNIILRKESVEYNQLKKQKQSIHALEVKIINLKIRLSAIKRETELHFSGFACNDQICTDIQKECLLPRNMQYYDY YASYRVINLIIFSIALLIFLSQSFHSAMFEMSDLTDLFLYGVMVSCLLIMFLIDQLLLYDVKNELKISEQDYPEIKKSLN DKFVEIDKQYCKLVKEISDYNMLSSTKITEANVEKLEKCKSKILSILNQV >Mature_289_residues PLLKNTARTAGVVGSFACLIFVGNVLMRYFCNKNSNAVIAVMSFLSVGIVMFFSIYGSNKDPLTFTKFKVYGILLASALI MFCITNIILRKESVEYNQLKKQKQSIHALEVKIINLKIRLSAIKRETELHFSGFACNDQICTDIQKECLLPRNMQYYDYY ASYRVINLIIFSIALLIFLSQSFHSAMFEMSDLTDLFLYGVMVSCLLIMFLIDQLLLYDVKNELKISEQDYPEIKKSLND KFVEIDKQYCKLVKEISDYNMLSSTKITEANVEKLEKCKSKILSILNQV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33321; Mature: 33190
Theoretical pI: Translated: 8.59; Mature: 8.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLLKNTARTAGVVGSFACLIFVGNVLMRYFCNKNSNAVIAVMSFLSVGIVMFFSIYGSN CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC KDPLTFTKFKVYGILLASALIMFCITNIILRKESVEYNQLKKQKQSIHALEVKIINLKIR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEEEEEEEE LSAIKRETELHFSGFACNDQICTDIQKECLLPRNMQYYDYYASYRVINLIIFSIALLIFL HHHHHHHHHHEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SQSFHSAMFEMSDLTDLFLYGVMVSCLLIMFLIDQLLLYDVKNELKISEQDYPEIKKSLN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH DKFVEIDKQYCKLVKEISDYNMLSSTKITEANVEKLEKCKSKILSILNQV HHHHHHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PLLKNTARTAGVVGSFACLIFVGNVLMRYFCNKNSNAVIAVMSFLSVGIVMFFSIYGSN CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC KDPLTFTKFKVYGILLASALIMFCITNIILRKESVEYNQLKKQKQSIHALEVKIINLKIR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEEEEEEEE LSAIKRETELHFSGFACNDQICTDIQKECLLPRNMQYYDYYASYRVINLIIFSIALLIFL HHHHHHHHHHEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SQSFHSAMFEMSDLTDLFLYGVMVSCLLIMFLIDQLLLYDVKNELKISEQDYPEIKKSLN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH DKFVEIDKQYCKLVKEISDYNMLSSTKITEANVEKLEKCKSKILSILNQV HHHHHHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA