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The map label for this gene is petB [H]

Identifier: 58617244

GI number: 58617244

Start: 830787

End: 832016

Strand: Reverse

Name: petB [H]

Synonym: ERGA_CDS_05170

Alternate gene names: 58617244

Gene position: 832016-830787 (Counterclockwise)

Preceding gene: 58617245

Following gene: 58617243

Centisome position: 55.47

GC content: 31.38

Gene sequence:

>1230_bases
TTGATGTCTGGACATAATAACATGGAAAAACAAGAAGGAAGTGGTATTTTATCGTGGATAGAATATAGATTGCCAATTTG
TGCTTTTTTAAAGGGGTTAGCTTCTTACCAAGTTCCAAAAAATTTAAATTATGCATGGAATTTTGGTTCATTAGCTGGTA
TTGCACTAATATTACAGATTATTACAGGGATATTTTTAGCAATGCATTATACACCTCATGTTGCACATGCGTTTGATAGT
GTAGAAAGAATAATGCGTGATGTTAATTATGGTTGGTTAATACGTTACACTCATGCTGTTGGGGCTTCATTTTTCTTTAT
AGTTGTATATATACATATATTGCGTGGTTTGTATTACGGTTCTTATAAGAGTCCACGTGAGTTGGTGTGGTTTGTTGGAA
TATTTATATTTTTTGCGATGATGGCTACGGCATTTATGGGATATGTGTTGCCATGGGGTCAAATGAGCTTTTGGGGTGCT
ACTGTAATTACTAATTTATTTTCTGTAATACCTTTAGTTGGTGACAATGTTGTACAATGGCTATGGGGTGGTTTTTCTGT
AGATAATCCAACTTTAAATAGGTTTTTTGCATTGCATTATTTATTGCCTTTTATTATTTTAATGCTTGCTTCATTACATG
TTATAGCACTACATAGGTTTGGGTCAGGTAATCCAAGTGGAATTGAAGTAAAATCTAGTAAAGATACTATTCCTATTTAT
CCTTATTTTATTGTAAAAGACTGTATAACATTTGGTATATTCTTTTTATTATTATTTTTATTTGTATTTTATATTCCAAA
TTATTTAGGCCATCCTGATAATTATATTGAAGCTGATCCTATGGTGACACCAGCTCATATAGTGCCTGAATGGTATTTTT
TACCATTTTATGCTATGTTGAGATCTATCCCAAACAAATTATTGGGTGTAGTTACGATGATTAGTTCTATAGCAGTATGG
TTTTTATTACCTGTGTTAGATAGGTCTAAAATTAAAAGTGGTGCTTATCGTCCAGTTTTCAGAATATTTTATTGGTTATT
TATTGCAAATTTTTGCTTATTAACTTGGCTTGGTGGGCAAGAGGTTAAAGAACCATTTGTAACGTTTAGTAGACTATCTA
CCTTGTATTATTTTTCCTATTTTGTTATTATCTTACCTATATTGTCTAAATATGAGAAATCAGTTGTCCTTCCAAATACA
CTAAGTGATACAGTTTCGGAGATGAAATAA

Upstream 100 bases:

>100_bases
TAAATCTTCCTGTACCTGATTATTATTTTTCTGGGAAAGATGTTATTGTAATAGGTGCAAAGGGAGTTGATGTTGCATAG
GTTTATAGAATAAGAGGTTA

Downstream 100 bases:

>100_bases
TGTTACTGCGTTTTATACTCATAATATTTTCTTTATATATTTCACCTGCTTATGCTACAGATGAATTTCATCCTGCATCT
CCTAAGAACATTAATTGGAA

Product: cytochrome B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 409; Mature: 409

Protein sequence:

>409_residues
MMSGHNNMEKQEGSGILSWIEYRLPICAFLKGLASYQVPKNLNYAWNFGSLAGIALILQIITGIFLAMHYTPHVAHAFDS
VERIMRDVNYGWLIRYTHAVGASFFFIVVYIHILRGLYYGSYKSPRELVWFVGIFIFFAMMATAFMGYVLPWGQMSFWGA
TVITNLFSVIPLVGDNVVQWLWGGFSVDNPTLNRFFALHYLLPFIILMLASLHVIALHRFGSGNPSGIEVKSSKDTIPIY
PYFIVKDCITFGIFFLLLFLFVFYIPNYLGHPDNYIEADPMVTPAHIVPEWYFLPFYAMLRSIPNKLLGVVTMISSIAVW
FLLPVLDRSKIKSGAYRPVFRIFYWLFIANFCLLTWLGGQEVKEPFVTFSRLSTLYYFSYFVIILPILSKYEKSVVLPNT
LSDTVSEMK

Sequences:

>Translated_409_residues
MMSGHNNMEKQEGSGILSWIEYRLPICAFLKGLASYQVPKNLNYAWNFGSLAGIALILQIITGIFLAMHYTPHVAHAFDS
VERIMRDVNYGWLIRYTHAVGASFFFIVVYIHILRGLYYGSYKSPRELVWFVGIFIFFAMMATAFMGYVLPWGQMSFWGA
TVITNLFSVIPLVGDNVVQWLWGGFSVDNPTLNRFFALHYLLPFIILMLASLHVIALHRFGSGNPSGIEVKSSKDTIPIY
PYFIVKDCITFGIFFLLLFLFVFYIPNYLGHPDNYIEADPMVTPAHIVPEWYFLPFYAMLRSIPNKLLGVVTMISSIAVW
FLLPVLDRSKIKSGAYRPVFRIFYWLFIANFCLLTWLGGQEVKEPFVTFSRLSTLYYFSYFVIILPILSKYEKSVVLPNT
LSDTVSEMK
>Mature_409_residues
MMSGHNNMEKQEGSGILSWIEYRLPICAFLKGLASYQVPKNLNYAWNFGSLAGIALILQIITGIFLAMHYTPHVAHAFDS
VERIMRDVNYGWLIRYTHAVGASFFFIVVYIHILRGLYYGSYKSPRELVWFVGIFIFFAMMATAFMGYVLPWGQMSFWGA
TVITNLFSVIPLVGDNVVQWLWGGFSVDNPTLNRFFALHYLLPFIILMLASLHVIALHRFGSGNPSGIEVKSSKDTIPIY
PYFIVKDCITFGIFFLLLFLFVFYIPNYLGHPDNYIEADPMVTPAHIVPEWYFLPFYAMLRSIPNKLLGVVTMISSIAVW
FLLPVLDRSKIKSGAYRPVFRIFYWLFIANFCLLTWLGGQEVKEPFVTFSRLSTLYYFSYFVIILPILSKYEKSVVLPNT
LSDTVSEMK

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis [H]

COG id: COG1290

COG function: function code C; Cytochrome b subunit of the bc complex

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome b family [H]

Homologues:

Organism=Homo sapiens, GI251831119, Length=359, Percent_Identity=52.3676880222841, Blast_Score=373, Evalue=1e-103,
Organism=Saccharomyces cerevisiae, GI6226529, Length=355, Percent_Identity=56.056338028169, Blast_Score=389, Evalue=1e-109,
Organism=Saccharomyces cerevisiae, GI6226532, Length=233, Percent_Identity=59.2274678111588, Blast_Score=275, Evalue=1e-74,
Organism=Saccharomyces cerevisiae, GI6226531, Length=152, Percent_Identity=59.8684210526316, Blast_Score=191, Evalue=2e-49,
Organism=Saccharomyces cerevisiae, GI6226530, Length=136, Percent_Identity=52.9411764705882, Blast_Score=146, Evalue=6e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016175
- InterPro:   IPR005798
- InterPro:   IPR005797
- InterPro:   IPR016174 [H]

Pfam domain/function: PF00032 Cytochrom_B_C; PF00033 Cytochrom_B_N [H]

EC number: NA

Molecular weight: Translated: 46994; Mature: 46994

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: PS51002 CYTB_NTER ; PS51003 CYTB_CTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCHHHHHHHHCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]