Definition Ehrlichia ruminantium str. Gardel, complete genome.
Accession NC_006831
Length 1,499,920

Click here to switch to the map view.

The map label for this gene is 58617177

Identifier: 58617177

GI number: 58617177

Start: 728149

End: 728871

Strand: Reverse

Name: 58617177

Synonym: ERGA_CDS_04500

Alternate gene names: NA

Gene position: 728871-728149 (Counterclockwise)

Preceding gene: 58617185

Following gene: 58617175

Centisome position: 48.59

GC content: 27.39

Gene sequence:

>723_bases
ATGTTCAACCATAAAGTCATACGTCTTATCAATACAACATTATGTAATAAGATAGATTTGCTTGTTGATGTTAAAGTTAA
GAGATCTTACTGTATAGGTCATACAGCAGATCATAAAAAGTTATTACAAGTATATATTACCAAGACTCATAAAAATCGAC
AACTAATTTTACCAAACGGACAATCTTTATTTTTATTAATGTTAAGCGTACCTAATGTAATATTGAAAAATGATCGTTAT
TTGTGTAAAGCTTTTGTGTTATCCAACGAAGAATTAGAAAAAAAATACATCAATGTTAAAGTATGTTTTTTAGTTGATGG
AGATAACATCGCAAATTTTGTACATGATATATTTAATTCACAACAATTAATATCTAAATATTTAGTAAGTTATGGTACTA
GTATATTTGTTAGGCCATTGATACAATCTTTACTTACATATAGATGTGATGAGTATTACTTTTTGAAAAATGTTGTAAAA
TTAAAGGCAGATTTTATACTAGAAGAAAAAGAAAAATCTAGTAAGTTATCCTATTATGGAAAGAGATACTGTCTTACAGT
TTTCTCTAATATGTGCAAAAAGTTACCGGATATAAAAGAATTATTGCCAATTCAAGAAGATAGTGGAACAGAGGAAGAAG
AAGAAAAACAACCAGCTCAAGCATTAGTTGAAACTTGTATTCAGTCTTTATCATCAGGCGAAGAGAATTTGAGAACGTAT
TAA

Upstream 100 bases:

>100_bases
ATCTATTGACATATTGCTTATTATGTTTATGTTTTTTTTATACTAATAAATTAATATTACTTATTAAAATATAATAACTA
ATAGTATTAATTTAAAGACT

Downstream 100 bases:

>100_bases
AAAATATACTAATAGCAATCTGTTCTAATAATTTTAGTTAATCTGAGAGAATATATGACATTCAGTAACATGACCGTTTA
TCCATAGATCAACTTGTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MFNHKVIRLINTTLCNKIDLLVDVKVKRSYCIGHTADHKKLLQVYITKTHKNRQLILPNGQSLFLLMLSVPNVILKNDRY
LCKAFVLSNEELEKKYINVKVCFLVDGDNIANFVHDIFNSQQLISKYLVSYGTSIFVRPLIQSLLTYRCDEYYFLKNVVK
LKADFILEEKEKSSKLSYYGKRYCLTVFSNMCKKLPDIKELLPIQEDSGTEEEEEKQPAQALVETCIQSLSSGEENLRTY

Sequences:

>Translated_240_residues
MFNHKVIRLINTTLCNKIDLLVDVKVKRSYCIGHTADHKKLLQVYITKTHKNRQLILPNGQSLFLLMLSVPNVILKNDRY
LCKAFVLSNEELEKKYINVKVCFLVDGDNIANFVHDIFNSQQLISKYLVSYGTSIFVRPLIQSLLTYRCDEYYFLKNVVK
LKADFILEEKEKSSKLSYYGKRYCLTVFSNMCKKLPDIKELLPIQEDSGTEEEEEKQPAQALVETCIQSLSSGEENLRTY
>Mature_240_residues
MFNHKVIRLINTTLCNKIDLLVDVKVKRSYCIGHTADHKKLLQVYITKTHKNRQLILPNGQSLFLLMLSVPNVILKNDRY
LCKAFVLSNEELEKKYINVKVCFLVDGDNIANFVHDIFNSQQLISKYLVSYGTSIFVRPLIQSLLTYRCDEYYFLKNVVK
LKADFILEEKEKSSKLSYYGKRYCLTVFSNMCKKLPDIKELLPIQEDSGTEEEEEKQPAQALVETCIQSLSSGEENLRTY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27867; Mature: 27867

Theoretical pI: Translated: 8.53; Mature: 8.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNHKVIRLINTTLCNKIDLLVDVKVKRSYCIGHTADHKKLLQVYITKTHKNRQLILPNG
CCCCHHHHHHHHHHHHHHHHEEEEEEHHHEECCCCCHHHHHHHHHHHHCCCCCEEECCCC
QSLFLLMLSVPNVILKNDRYLCKAFVLSNEELEKKYINVKVCFLVDGDNIANFVHDIFNS
CHHEEHEECCCCCEECCCCHHHHHHHHCCHHHHHHHEEEEEEEEECCCHHHHHHHHHHCH
QQLISKYLVSYGTSIFVRPLIQSLLTYRCDEYYFLKNVVKLKADFILEEKEKSSKLSYYG
HHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KRYCLTVFSNMCKKLPDIKELLPIQEDSGTEEEEEKQPAQALVETCIQSLSSGEENLRTY
HHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCC
>Mature Secondary Structure
MFNHKVIRLINTTLCNKIDLLVDVKVKRSYCIGHTADHKKLLQVYITKTHKNRQLILPNG
CCCCHHHHHHHHHHHHHHHHEEEEEEHHHEECCCCCHHHHHHHHHHHHCCCCCEEECCCC
QSLFLLMLSVPNVILKNDRYLCKAFVLSNEELEKKYINVKVCFLVDGDNIANFVHDIFNS
CHHEEHEECCCCCEECCCCHHHHHHHHCCHHHHHHHEEEEEEEEECCCHHHHHHHHHHCH
QQLISKYLVSYGTSIFVRPLIQSLLTYRCDEYYFLKNVVKLKADFILEEKEKSSKLSYYG
HHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KRYCLTVFSNMCKKLPDIKELLPIQEDSGTEEEEEKQPAQALVETCIQSLSSGEENLRTY
HHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA