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The map label for this gene is fadB

Identifier: 58617174

GI number: 58617174

Start: 723551

End: 724780

Strand: Reverse

Name: fadB

Synonym: ERGA_CDS_04470

Alternate gene names: NA

Gene position: 724780-723551 (Counterclockwise)

Preceding gene: 58617175

Following gene: 58617171

Centisome position: 48.32

GC content: 23.01

Gene sequence:

>1230_bases
GTGGAAATGCATAAAATAGCACTTATAGATTTTACAAAAAATAGTAATATAACAGAATATATCATAAATAATTTTAATGT
TCCAATTATTATAGTGGAGCTAGATAATCTTGGTAATGGATTACAGGAAAATCATTTACTAAAGGTTATCAGTGTAAATG
ATGATCTTTCTTGTCTTAAAGAAGTAAGTTGGATAATAAATATTAGTGATCAAAAAAAAAATACAGATTTTTTATATCAT
ACATATAACAAAGTTATTCCTTACCTTAGTGATAATATTATTATCTCATCTAATTCAGTTTTTTTATTGGATGTTATAGA
GAGTAAAATATTAAATAATATGTATTGTTATAATTTGGTAATTACAGATTTTTTTAATTATAATAATGTAATAAAATTGA
TACAATGTGCTCTTTATAAGAAAAAAGGTGAGGGTAAGGTAGTTGATGTACTATATAGTTTTAATTGTACTAATTTAATT
GTATGTAATAATACTCCAGGACTCATATTAGATAGAATTATGTCATTTCTATTAATGATTGTATTAATAGGAGCTTACGA
TTTTCAAATAAAGATAGAAGAAGCTGATTTTGTTATCAGTAATAATCATATTGGAATATCAAATGGTATGTTTAAATTAT
TAGATAAAATGGGTTTAGACAAATTTATTACCACTGTACAATCTTTAGTTAATGTCTTGCCAAATGATGATCATTTAAGT
CAATTATACAATATGATTCCTAAAATAGTATTTCAAATGATTTCTGACGGTTATACTGGTTCTACAAGTAATATTGGTGG
TTTTTATAGATCTTATGAGCTTTATAATGGATATAATAATCAGGTCATAGATTTATATACTGGCTTATACAGATCTATAT
CTTATATTAATCAAGAATTTAAAAGTGTTGAGAGTTTATTTGATACTAATAATAAATATGGAAAATTTATGTATTATGTG
TGGTCAAATACTTTAATATATATTGCTTCTTTAGTTCCAGAATTATCTTCTAATATATCAATTATAGATAAAGCAGTAAA
ATTAACATATGGATGGAAATATGGTCCATTTGAAATTATTGATATGTTAAATGATTGTAATCATAATAAATTTTGTTTTT
TTAATTCTGCTATAGAATGTAACAATTTACCAAAAATTCTGTCATTAAAGAAAAAAATGTATAATAATCAAGGTCAGTAT
CTTAATATATATGATGGGGGGTATGTATAA

Upstream 100 bases:

>100_bases
GTAAAGAAAATAGAAGATGAATTTGGTGTTTAATAAATATATTGTTAATTAATTGTATAACATATATAGATTGCTATATA
GCTAAAAAAGGAAAAACTTC

Downstream 100 bases:

>100_bases
AATACTGCCATTAATAATATTTTTTTATTATTATATATATTACATAATGTATATTATGGAAAATTAATCTTACATAACAT
CTCTCTGTACACTTACACAT

Product: putative 3-hydroxyacyl-CoA dehydrogenase

Products: NA

Alternate protein names: 3-hydroxyacyl-CoA dehydrogenase; Enoyl-CoA hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA isomerase [H]

Number of amino acids: Translated: 409; Mature: 409

Protein sequence:

>409_residues
MEMHKIALIDFTKNSNITEYIINNFNVPIIIVELDNLGNGLQENHLLKVISVNDDLSCLKEVSWIINISDQKKNTDFLYH
TYNKVIPYLSDNIIISSNSVFLLDVIESKILNNMYCYNLVITDFFNYNNVIKLIQCALYKKKGEGKVVDVLYSFNCTNLI
VCNNTPGLILDRIMSFLLMIVLIGAYDFQIKIEEADFVISNNHIGISNGMFKLLDKMGLDKFITTVQSLVNVLPNDDHLS
QLYNMIPKIVFQMISDGYTGSTSNIGGFYRSYELYNGYNNQVIDLYTGLYRSISYINQEFKSVESLFDTNNKYGKFMYYV
WSNTLIYIASLVPELSSNISIIDKAVKLTYGWKYGPFEIIDMLNDCNHNKFCFFNSAIECNNLPKILSLKKKMYNNQGQY
LNIYDGGYV

Sequences:

>Translated_409_residues
MEMHKIALIDFTKNSNITEYIINNFNVPIIIVELDNLGNGLQENHLLKVISVNDDLSCLKEVSWIINISDQKKNTDFLYH
TYNKVIPYLSDNIIISSNSVFLLDVIESKILNNMYCYNLVITDFFNYNNVIKLIQCALYKKKGEGKVVDVLYSFNCTNLI
VCNNTPGLILDRIMSFLLMIVLIGAYDFQIKIEEADFVISNNHIGISNGMFKLLDKMGLDKFITTVQSLVNVLPNDDHLS
QLYNMIPKIVFQMISDGYTGSTSNIGGFYRSYELYNGYNNQVIDLYTGLYRSISYINQEFKSVESLFDTNNKYGKFMYYV
WSNTLIYIASLVPELSSNISIIDKAVKLTYGWKYGPFEIIDMLNDCNHNKFCFFNSAIECNNLPKILSLKKKMYNNQGQY
LNIYDGGYV
>Mature_409_residues
MEMHKIALIDFTKNSNITEYIINNFNVPIIIVELDNLGNGLQENHLLKVISVNDDLSCLKEVSWIINISDQKKNTDFLYH
TYNKVIPYLSDNIIISSNSVFLLDVIESKILNNMYCYNLVITDFFNYNNVIKLIQCALYKKKGEGKVVDVLYSFNCTNLI
VCNNTPGLILDRIMSFLLMIVLIGAYDFQIKIEEADFVISNNHIGISNGMFKLLDKMGLDKFITTVQSLVNVLPNDDHLS
QLYNMIPKIVFQMISDGYTGSTSNIGGFYRSYELYNGYNNQVIDLYTGLYRSISYINQEFKSVESLFDTNNKYGKFMYYV
WSNTLIYIASLVPELSSNISIIDKAVKLTYGWKYGPFEIIDMLNDCNHNKFCFFNSAIECNNLPKILSLKKKMYNNQGQY
LNIYDGGYV

Specific function: Unknown

COG id: COG1250

COG function: function code I; 3-hydroxyacyl-CoA dehydrogenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: In the C-terminal section; belongs to the enoyl-CoA hydratase/isomerase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006176
- InterPro:   IPR006108
- InterPro:   IPR008927
- InterPro:   IPR001753
- InterPro:   IPR013328
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00725 3HCDH; PF02737 3HCDH_N; PF00378 ECH [H]

EC number: =1.1.1.35; =4.2.1.17; =5.3.3.8 [H]

Molecular weight: Translated: 47070; Mature: 47070

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEMHKIALIDFTKNSNITEYIINNFNVPIIIVELDNLGNGLQENHLLKVISVNDDLSCLK
CCCEEEEEEEECCCCCHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCHHHHH
EVSWIINISDQKKNTDFLYHTYNKVIPYLSDNIIISSNSVFLLDVIESKILNNMYCYNLV
HHHEEEEECCCCCCCCEEEEEHHHHCCCCCCCEEEECCCEEEEEHHHHHHHCCHHHHHHH
ITDFFNYNNVIKLIQCALYKKKGEGKVVDVLYSFNCTNLIVCNNTPGLILDRIMSFLLMI
HHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHH
VLIGAYDFQIKIEEADFVISNNHIGISNGMFKLLDKMGLDKFITTVQSLVNVLPNDDHLS
HHHCCCEEEEEEECCCEEEECCEEECCCCHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHH
QLYNMIPKIVFQMISDGYTGSTSNIGGFYRSYELYNGYNNQVIDLYTGLYRSISYINQEF
HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHEEHEECCCCCCCHHHHHHHHHHHHHHHHHH
KSVESLFDTNNKYGKFMYYVWSNTLIYIASLVPELSSNISIIDKAVKLTYGWKYGPFEII
HHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHCCCHHHEEHHEEEEECCCCCHHHHH
DMLNDCNHNKFCFFNSAIECNNLPKILSLKKKMYNNQGQYLNIYDGGYV
HHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCC
>Mature Secondary Structure
MEMHKIALIDFTKNSNITEYIINNFNVPIIIVELDNLGNGLQENHLLKVISVNDDLSCLK
CCCEEEEEEEECCCCCHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCHHHHH
EVSWIINISDQKKNTDFLYHTYNKVIPYLSDNIIISSNSVFLLDVIESKILNNMYCYNLV
HHHEEEEECCCCCCCCEEEEEHHHHCCCCCCCEEEECCCEEEEEHHHHHHHCCHHHHHHH
ITDFFNYNNVIKLIQCALYKKKGEGKVVDVLYSFNCTNLIVCNNTPGLILDRIMSFLLMI
HHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHH
VLIGAYDFQIKIEEADFVISNNHIGISNGMFKLLDKMGLDKFITTVQSLVNVLPNDDHLS
HHHCCCEEEEEEECCCEEEECCEEECCCCHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHH
QLYNMIPKIVFQMISDGYTGSTSNIGGFYRSYELYNGYNNQVIDLYTGLYRSISYINQEF
HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHEEHEECCCCCCCHHHHHHHHHHHHHHHHHH
KSVESLFDTNNKYGKFMYYVWSNTLIYIASLVPELSSNISIIDKAVKLTYGWKYGPFEII
HHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHCCCHHHEEHHEEEEECCCCCHHHHH
DMLNDCNHNKFCFFNSAIECNNLPKILSLKKKMYNNQGQYLNIYDGGYV
HHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]