| Definition | Ehrlichia ruminantium str. Gardel, complete genome. |
|---|---|
| Accession | NC_006831 |
| Length | 1,499,920 |
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The map label for this gene is 58617096
Identifier: 58617096
GI number: 58617096
Start: 608981
End: 610540
Strand: Reverse
Name: 58617096
Synonym: ERGA_CDS_03690
Alternate gene names: NA
Gene position: 610540-608981 (Counterclockwise)
Preceding gene: 58617098
Following gene: 58617095
Centisome position: 40.7
GC content: 27.37
Gene sequence:
>1560_bases ATGAGTAAGTTAAAAGCTAAAATATTGTTAATTTTATTACTAATAATATTAGCTTGCAGTTTAACACTTTTTTTTACATT ACAAAAACAATTTAACAGTACAACATTCTGGATTATTTTTGGTGCTTTACTTTTAATAACAAGCGCTGCTGTTGTATTTA GTGCAATAAAATGTGCTATAATACATTACGATGGCATTTCTATGAAAAGTATAGGCACAGACTATATTATAACATTGAGA GAACCAAGCGAACAAGTTGTTGTATTTTTACCAATACCTTCTGAAGAAATACACAATATAGATACTGGATATAACATTAT TGACCTTTTGTATAAAAAAGCAAGTTACAAAGACAGCTATATATTAAATATTAAACAAAATAATACAACATTATTTTCAA GTAAAAATTCAGATATAGATATAAGTTTAGATAATACGAAAAAAGTACAGTTATTTATGGGAAACCATAATAATGTTAGT ACTAAGGATACTGGATTATATATCACAGTCAATGTTGATAAGTCATTACTATCAGAATCTATTAAGAAACATGTAGGTAA TGAAATACTGTATGTAACATTACAAGATGGCAAACTATTGTTAACTTGTAAATATATTAGGTTTTACAGTAGTGAACTAC TAAATAATTCAGCAATTAAAGATCCTTATGGTCAAGAAGAGTTTGAACAAATTCTACGTTATAAGGTTAAATCTACAAGT GATAAGAGTTCAGTAAGACCATTATATGATATTATAGCAATAAGAATTTTATCTAATTGCCCTCCAATAGACAACGATAA TAACTGGGCTAAGACTGAAGGTGGTCAAACAGCCATAAGATTCTTTTCTATGTTCGATGCTAAACGTATGTTATACGGAC AAGAATTAAGTAACAAACAATTAGCAGTCAAACTCAAAGCAATTACAGATTATATTACTAATATTACATTCAAGGGAAAT ATGTCATATGATGATGTGATCTTTAATCAAATAAAAAACTTGTATCTTGAAAAATGTGATGAGACAACAGAATATCATTT ATTATATAAGAATCGTTATATAAGTAACACTGGTAAGCGTATTAGTGACAAAATACATGAGAATATAAAGAAAAATAAGT TATACAAATACATTTGTGCTATTGCTTCTCAGGATAGTAAGAATCCATTATCTAAAAAAACAAATGAATTTCTTCATAAT ATATTATCTTCTGAAACACCACATCTTGATATTGCACCTCTTATGTCCAATCCTAATGAAAGAGAGGACATTATGGCATC ACTTGATCAATCTAAAAATGAAGAACTATGTGCTGTGCTAAAGGAATTATTAGGGTCAACTACCCTTTCATATGATATAT TTACTTTGATTCAAAAGGCTAAAGATTATATTATGAAAGATTGTAAACAACATATGAATTTATTATACTGCGAAAAATAT TACCAATTAAATGCAGGATATGTTGATAATATTACCATATGTTCTAGTGCTACAAAAAGTCCTAGTATTGTAAATAATAC TGATATTAAAAACCCAAGTTACATAGGGCATTCAGTGTAA
Upstream 100 bases:
>100_bases TTAAGTAAAAAATTATCCATTTTATACAGTATAATATATTTAAAAATTGTATTAATTATATCATAATGGTAAAATTAGTT AAAATTTTTTAAGGACTTTT
Downstream 100 bases:
>100_bases AAATGCTACTACTAATGTATCATCAGCTTAAGATTAAGTAACATTTTATACTGTAAATAATGGTAGTAATATTATTACAT TTTTCTAAGTAAAACTAATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 519; Mature: 518
Protein sequence:
>519_residues MSKLKAKILLILLLIILACSLTLFFTLQKQFNSTTFWIIFGALLLITSAAVVFSAIKCAIIHYDGISMKSIGTDYIITLR EPSEQVVVFLPIPSEEIHNIDTGYNIIDLLYKKASYKDSYILNIKQNNTTLFSSKNSDIDISLDNTKKVQLFMGNHNNVS TKDTGLYITVNVDKSLLSESIKKHVGNEILYVTLQDGKLLLTCKYIRFYSSELLNNSAIKDPYGQEEFEQILRYKVKSTS DKSSVRPLYDIIAIRILSNCPPIDNDNNWAKTEGGQTAIRFFSMFDAKRMLYGQELSNKQLAVKLKAITDYITNITFKGN MSYDDVIFNQIKNLYLEKCDETTEYHLLYKNRYISNTGKRISDKIHENIKKNKLYKYICAIASQDSKNPLSKKTNEFLHN ILSSETPHLDIAPLMSNPNEREDIMASLDQSKNEELCAVLKELLGSTTLSYDIFTLIQKAKDYIMKDCKQHMNLLYCEKY YQLNAGYVDNITICSSATKSPSIVNNTDIKNPSYIGHSV
Sequences:
>Translated_519_residues MSKLKAKILLILLLIILACSLTLFFTLQKQFNSTTFWIIFGALLLITSAAVVFSAIKCAIIHYDGISMKSIGTDYIITLR EPSEQVVVFLPIPSEEIHNIDTGYNIIDLLYKKASYKDSYILNIKQNNTTLFSSKNSDIDISLDNTKKVQLFMGNHNNVS TKDTGLYITVNVDKSLLSESIKKHVGNEILYVTLQDGKLLLTCKYIRFYSSELLNNSAIKDPYGQEEFEQILRYKVKSTS DKSSVRPLYDIIAIRILSNCPPIDNDNNWAKTEGGQTAIRFFSMFDAKRMLYGQELSNKQLAVKLKAITDYITNITFKGN MSYDDVIFNQIKNLYLEKCDETTEYHLLYKNRYISNTGKRISDKIHENIKKNKLYKYICAIASQDSKNPLSKKTNEFLHN ILSSETPHLDIAPLMSNPNEREDIMASLDQSKNEELCAVLKELLGSTTLSYDIFTLIQKAKDYIMKDCKQHMNLLYCEKY YQLNAGYVDNITICSSATKSPSIVNNTDIKNPSYIGHSV >Mature_518_residues SKLKAKILLILLLIILACSLTLFFTLQKQFNSTTFWIIFGALLLITSAAVVFSAIKCAIIHYDGISMKSIGTDYIITLRE PSEQVVVFLPIPSEEIHNIDTGYNIIDLLYKKASYKDSYILNIKQNNTTLFSSKNSDIDISLDNTKKVQLFMGNHNNVST KDTGLYITVNVDKSLLSESIKKHVGNEILYVTLQDGKLLLTCKYIRFYSSELLNNSAIKDPYGQEEFEQILRYKVKSTSD KSSVRPLYDIIAIRILSNCPPIDNDNNWAKTEGGQTAIRFFSMFDAKRMLYGQELSNKQLAVKLKAITDYITNITFKGNM SYDDVIFNQIKNLYLEKCDETTEYHLLYKNRYISNTGKRISDKIHENIKKNKLYKYICAIASQDSKNPLSKKTNEFLHNI LSSETPHLDIAPLMSNPNEREDIMASLDQSKNEELCAVLKELLGSTTLSYDIFTLIQKAKDYIMKDCKQHMNLLYCEKYY QLNAGYVDNITICSSATKSPSIVNNTDIKNPSYIGHSV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59147; Mature: 59016
Theoretical pI: Translated: 8.34; Mature: 8.34
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKLKAKILLILLLIILACSLTLFFTLQKQFNSTTFWIIFGALLLITSAAVVFSAIKCAI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEEE IHYDGISMKSIGTDYIITLREPSEQVVVFLPIPSEEIHNIDTGYNIIDLLYKKASYKDSY EEECCCCCCCCCCCEEEEEECCCCCEEEEEECCHHHHCCCCCCCHHHHHHHHHCCCCCCE ILNIKQNNTTLFSSKNSDIDISLDNTKKVQLFMGNHNNVSTKDTGLYITVNVDKSLLSES EEEEECCCEEEEECCCCCEEEEECCCEEEEEEECCCCCCCCCCCCEEEEEECCHHHHHHH IKKHVGNEILYVTLQDGKLLLTCKYIRFYSSELLNNSAIKDPYGQEEFEQILRYKVKSTS HHHHCCCEEEEEEEECCCEEEEEHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCC DKSSVRPLYDIIAIRILSNCPPIDNDNNWAKTEGGQTAIRFFSMFDAKRMLYGQELSNKQ CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCE LAVKLKAITDYITNITFKGNMSYDDVIFNQIKNLYLEKCDETTEYHLLYKNRYISNTGKR EEEEHHHHHHHHHCEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHH ISDKIHENIKKNKLYKYICAIASQDSKNPLSKKTNEFLHNILSSETPHLDIAPLMSNPNE HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCH REDIMASLDQSKNEELCAVLKELLGSTTLSYDIFTLIQKAKDYIMKDCKQHMNLLYCEKY HHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEHHH YQLNAGYVDNITICSSATKSPSIVNNTDIKNPSYIGHSV HEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SKLKAKILLILLLIILACSLTLFFTLQKQFNSTTFWIIFGALLLITSAAVVFSAIKCAI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEEE IHYDGISMKSIGTDYIITLREPSEQVVVFLPIPSEEIHNIDTGYNIIDLLYKKASYKDSY EEECCCCCCCCCCCEEEEEECCCCCEEEEEECCHHHHCCCCCCCHHHHHHHHHCCCCCCE ILNIKQNNTTLFSSKNSDIDISLDNTKKVQLFMGNHNNVSTKDTGLYITVNVDKSLLSES EEEEECCCEEEEECCCCCEEEEECCCEEEEEEECCCCCCCCCCCCEEEEEECCHHHHHHH IKKHVGNEILYVTLQDGKLLLTCKYIRFYSSELLNNSAIKDPYGQEEFEQILRYKVKSTS HHHHCCCEEEEEEEECCCEEEEEHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCC DKSSVRPLYDIIAIRILSNCPPIDNDNNWAKTEGGQTAIRFFSMFDAKRMLYGQELSNKQ CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCE LAVKLKAITDYITNITFKGNMSYDDVIFNQIKNLYLEKCDETTEYHLLYKNRYISNTGKR EEEEHHHHHHHHHCEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHH ISDKIHENIKKNKLYKYICAIASQDSKNPLSKKTNEFLHNILSSETPHLDIAPLMSNPNE HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCH REDIMASLDQSKNEELCAVLKELLGSTTLSYDIFTLIQKAKDYIMKDCKQHMNLLYCEKY HHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEHHH YQLNAGYVDNITICSSATKSPSIVNNTDIKNPSYIGHSV HEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA