| Definition | Ehrlichia ruminantium str. Gardel, complete genome. |
|---|---|
| Accession | NC_006831 |
| Length | 1,499,920 |
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The map label for this gene is virA [C]
Identifier: 58617066
GI number: 58617066
Start: 560171
End: 562657
Strand: Reverse
Name: virA [C]
Synonym: ERGA_CDS_03390
Alternate gene names: 58617066
Gene position: 562657-560171 (Counterclockwise)
Preceding gene: 58617067
Following gene: 58617065
Centisome position: 37.51
GC content: 27.1
Gene sequence:
>2487_bases ATGAAAAAACGACATACTGATAATACAATACATAATAATAAAGTAGATTTTGTCATAAGAAGATATGGATTATCAGTAGC TAAACTGTCTATATTTTTGATAATTCCACTACTATTTATACTGGTATTATATGTTTTTAATATATATGATAGTTATATCA ATATAATAATCAATTGTATATTTACTAGTATAAGTATATTAGCAATATCAATACAAATTAAGCAATATTTACGTACTATA GCTTCTATAGAATATCAAAATATGATTTTTGCAAATGCCTTAAACCACAATACAGAATTTTGCTTAATCATAAAAAATAA CGGAGAAATTGTTTACGCAGATGCAAGATTTTATGAAAGGTTTATCAAGAACCAAGACAAGAAATTAGACCTGCCTACTA TATTAAAATTAGGTAACATTAGTAATCAAGAAATTGAGCTATTCAATAATGCTTTAAAAAACAAATCATCTATTCACACT TACTTTTCACTTAATACAAAAAATAAAACTTCTAACTTTACATTAATATTAGACCCAGTAGTAGAAAACCCAGAAATAGA GGTCAATTGTACCAAAATTACAAACCTATTTTTCACACCTATAGCAAGACCTCAAGAATACTTCGTACTGAAAGCTGTTA AAATCAGTAAAGAACAAGTATATGAAAGACTAATTCAGGAACACTGTGTAGGAGCTTATTTACTAAATAGTAGAGGAGTT ATATTACATTCAAATAATAGCTTTTTAAAAATGCTAGAGCTAGACTTCATTGAAAATGGAGCAACATTCACCAACTTCTT AGTAAAAAGTTACAACAAAGAAAAAACTACAGATAGTAACATAGTAAACCTCTTAACAGCTACAGGAGTTAAATTCAAGG CATATATCTCACAAGTTGCGTTTTATGATAAAAATAACCAAAGTTACATTTATGGATTGTTAACACCAATAAATTCCGGA ATTCATGATTATCACTTACATCCATGTTTTATGGAAGCACCTATAGCTATCCTACAGTGCAATACGGACGGTAAAATTAT CAAGTCTAATAACACATTAAAAAGGCTAGTAAAGCACAATAAAGAGTATATATATGACTATGTACTACCATCATATAACA AAAAAATAAAGAAATATTTAGAAAACAATATCGTCAAAGACTTATCATTAGAAGCACAATTGAATAATAATTCGTATGTT AAAATCTATTTCAATAAATTTATACATAACAATGATATGTTAATTATATGCTACATAATTGACAGTAAAGACCGTAAAAA CTTAGAAATACAATTAGAACAGTCACAAAAAATGCAAGCTATTGGCCAACTTGCAGGAGGAATAGCACATGATTTTAATA ATATTCTCACTGCAATAATAGGATTTTGTGATTTATTACTAATAAAACACTCCACAACAGACCCTTCATTTTCAGATATA ATGCAAATAAAACAGAATGCTAATAGAGCCACAAATTTAATAAAACAACTGTTAGCATTTTCAAGAAAACAAACTTTACA ACCCAAGATTCTAGATATAAACAATATAATAGCAGATCTTATACATATGATCAAAAGACTGATCAATGAAAGTATAGAAC TTAAAATTCAATATGAACAAAATATTAATTTAATAAAAGCAGATTTATGTCAATTAGAACAAGTAATTATAAACTTAGTA GTAAATGCAAGATCTGCTATGGAAACTGGAGGACAGTTGACTATAAAAACCTATAATATAAAAGCAGATGCTTTAAAAGT ATTACTCAAAGATATGTTTTCACCTGATAAAGAACAAATCGAAGATGGAGAATATGTTGCAATAGAAATATCAGATACTG GACATGGAATGGAAGAAAAAGTGATGAAGAAAATCTTTGATCCATTTTTCTCAACAAAAAAAACAACAGAAGGCATAGGA TTAGGTTTATCTACAGTATATGGAATAGTTAAACAAACTGATGGATATATATATGTCACAAGTACAATAAATATAGGTAC AACTTTCATTATTCTTCTTCCAACAGTACATTTATTACATAACACCAACAACACTAATCTAGAATCTAATCAAGATTCAG AGTATATAGGTGCTGTAACACAAGAAATTAATAATACAACCAAAAACATTTTATTAATTGAAGACGAAGATCCAGTACGA ATATTTGCCACAAAAGCACTTGTAAAAAAAGGATTTAATGTAATAGATATAAATTGTGGAGACAAAGCTATAGACATAAT AAAAAACCAAAACATAGATATAGTCATTAGTGACGTAGTCATGCCAAAAATTAGTGGACCAGAAATAATAGATCAAATAT TAAAAATTCAACCAAACATTAAAGTTATTTTTATTTCTGGATACGCCGAAGAAGTATTTAATAAACACAGCAATATTGAT GCAAGTAAAATAAATTTTTTATCTAAACCTTTCACCTTAAAACAATTAACAGAAAAAGTATCAGAAATATTAGGCAGTTT TACATAA
Upstream 100 bases:
>100_bases AACGTTAATTATATCGTTAATAGTATGATTATAAAAATAGATTATATAGCAATTTTACACACATTATATATAATACAATA TATTTTTTAAATATTTTTAA
Downstream 100 bases:
>100_bases CAAAATACTTAATCAAATTACTCTTATTATAAGTCTAGATAGAAATTATATCATGTTATATCTTTACTTTATTTTTATAT TCATAATAACATGAAAAATG
Product: putative histidine kinase sensor protein
Products: NA
Alternate protein names: Blue-light-activated histidine kinase; Response regulator [H]
Number of amino acids: Translated: 828; Mature: 828
Protein sequence:
>828_residues MKKRHTDNTIHNNKVDFVIRRYGLSVAKLSIFLIIPLLFILVLYVFNIYDSYINIIINCIFTSISILAISIQIKQYLRTI ASIEYQNMIFANALNHNTEFCLIIKNNGEIVYADARFYERFIKNQDKKLDLPTILKLGNISNQEIELFNNALKNKSSIHT YFSLNTKNKTSNFTLILDPVVENPEIEVNCTKITNLFFTPIARPQEYFVLKAVKISKEQVYERLIQEHCVGAYLLNSRGV ILHSNNSFLKMLELDFIENGATFTNFLVKSYNKEKTTDSNIVNLLTATGVKFKAYISQVAFYDKNNQSYIYGLLTPINSG IHDYHLHPCFMEAPIAILQCNTDGKIIKSNNTLKRLVKHNKEYIYDYVLPSYNKKIKKYLENNIVKDLSLEAQLNNNSYV KIYFNKFIHNNDMLIICYIIDSKDRKNLEIQLEQSQKMQAIGQLAGGIAHDFNNILTAIIGFCDLLLIKHSTTDPSFSDI MQIKQNANRATNLIKQLLAFSRKQTLQPKILDINNIIADLIHMIKRLINESIELKIQYEQNINLIKADLCQLEQVIINLV VNARSAMETGGQLTIKTYNIKADALKVLLKDMFSPDKEQIEDGEYVAIEISDTGHGMEEKVMKKIFDPFFSTKKTTEGIG LGLSTVYGIVKQTDGYIYVTSTINIGTTFIILLPTVHLLHNTNNTNLESNQDSEYIGAVTQEINNTTKNILLIEDEDPVR IFATKALVKKGFNVIDINCGDKAIDIIKNQNIDIVISDVVMPKISGPEIIDQILKIQPNIKVIFISGYAEEVFNKHSNID ASKINFLSKPFTLKQLTEKVSEILGSFT
Sequences:
>Translated_828_residues MKKRHTDNTIHNNKVDFVIRRYGLSVAKLSIFLIIPLLFILVLYVFNIYDSYINIIINCIFTSISILAISIQIKQYLRTI ASIEYQNMIFANALNHNTEFCLIIKNNGEIVYADARFYERFIKNQDKKLDLPTILKLGNISNQEIELFNNALKNKSSIHT YFSLNTKNKTSNFTLILDPVVENPEIEVNCTKITNLFFTPIARPQEYFVLKAVKISKEQVYERLIQEHCVGAYLLNSRGV ILHSNNSFLKMLELDFIENGATFTNFLVKSYNKEKTTDSNIVNLLTATGVKFKAYISQVAFYDKNNQSYIYGLLTPINSG IHDYHLHPCFMEAPIAILQCNTDGKIIKSNNTLKRLVKHNKEYIYDYVLPSYNKKIKKYLENNIVKDLSLEAQLNNNSYV KIYFNKFIHNNDMLIICYIIDSKDRKNLEIQLEQSQKMQAIGQLAGGIAHDFNNILTAIIGFCDLLLIKHSTTDPSFSDI MQIKQNANRATNLIKQLLAFSRKQTLQPKILDINNIIADLIHMIKRLINESIELKIQYEQNINLIKADLCQLEQVIINLV VNARSAMETGGQLTIKTYNIKADALKVLLKDMFSPDKEQIEDGEYVAIEISDTGHGMEEKVMKKIFDPFFSTKKTTEGIG LGLSTVYGIVKQTDGYIYVTSTINIGTTFIILLPTVHLLHNTNNTNLESNQDSEYIGAVTQEINNTTKNILLIEDEDPVR IFATKALVKKGFNVIDINCGDKAIDIIKNQNIDIVISDVVMPKISGPEIIDQILKIQPNIKVIFISGYAEEVFNKHSNID ASKINFLSKPFTLKQLTEKVSEILGSFT >Mature_828_residues MKKRHTDNTIHNNKVDFVIRRYGLSVAKLSIFLIIPLLFILVLYVFNIYDSYINIIINCIFTSISILAISIQIKQYLRTI ASIEYQNMIFANALNHNTEFCLIIKNNGEIVYADARFYERFIKNQDKKLDLPTILKLGNISNQEIELFNNALKNKSSIHT YFSLNTKNKTSNFTLILDPVVENPEIEVNCTKITNLFFTPIARPQEYFVLKAVKISKEQVYERLIQEHCVGAYLLNSRGV ILHSNNSFLKMLELDFIENGATFTNFLVKSYNKEKTTDSNIVNLLTATGVKFKAYISQVAFYDKNNQSYIYGLLTPINSG IHDYHLHPCFMEAPIAILQCNTDGKIIKSNNTLKRLVKHNKEYIYDYVLPSYNKKIKKYLENNIVKDLSLEAQLNNNSYV KIYFNKFIHNNDMLIICYIIDSKDRKNLEIQLEQSQKMQAIGQLAGGIAHDFNNILTAIIGFCDLLLIKHSTTDPSFSDI MQIKQNANRATNLIKQLLAFSRKQTLQPKILDINNIIADLIHMIKRLINESIELKIQYEQNINLIKADLCQLEQVIINLV VNARSAMETGGQLTIKTYNIKADALKVLLKDMFSPDKEQIEDGEYVAIEISDTGHGMEEKVMKKIFDPFFSTKKTTEGIG LGLSTVYGIVKQTDGYIYVTSTINIGTTFIILLPTVHLLHNTNNTNLESNQDSEYIGAVTQEINNTTKNILLIEDEDPVR IFATKALVKKGFNVIDINCGDKAIDIIKNQNIDIVISDVVMPKISGPEIIDQILKIQPNIKVIFISGYAEEVFNKHSNID ASKINFLSKPFTLKQLTEKVSEILGSFT
Specific function: Photosensitive kinase and response regulator that is involved in increased bacterial virulence upon exposure to light [H]
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788549, Length=272, Percent_Identity=28.6764705882353, Blast_Score=117, Evalue=4e-27, Organism=Escherichia coli, GI1790436, Length=258, Percent_Identity=28.6821705426357, Blast_Score=108, Evalue=2e-24, Organism=Escherichia coli, GI145693157, Length=300, Percent_Identity=25.3333333333333, Blast_Score=85, Evalue=2e-17, Organism=Escherichia coli, GI48994928, Length=417, Percent_Identity=22.0623501199041, Blast_Score=79, Evalue=1e-15, Organism=Escherichia coli, GI1788713, Length=432, Percent_Identity=22.6851851851852, Blast_Score=78, Evalue=2e-15, Organism=Escherichia coli, GI1790300, Length=288, Percent_Identity=24.6527777777778, Blast_Score=70, Evalue=8e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 94404; Mature: 94404
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKRHTDNTIHNNKVDFVIRRYGLSVAKLSIFLIIPLLFILVLYVFNIYDSYINIIINCI CCCCCCCCCCCCCCHHEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FTSISILAISIQIKQYLRTIASIEYQNMIFANALNHNTEFCLIIKNNGEIVYADARFYER HHHHHHHHHHHHHHHHHHHHHHCHHHHHHEEHHCCCCCCEEEEEECCCCEEEECHHHHHH FIKNQDKKLDLPTILKLGNISNQEIELFNNALKNKSSIHTYFSLNTKNKTSNFTLILDPV HHCCCCCCCCCHHHHEECCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCCEEEEEECC VENPEIEVNCTKITNLFFTPIARPQEYFVLKAVKISKEQVYERLIQEHCVGAYLLNSRGV CCCCCEEEEEEEEEEEHCCCCCCCCHHEEEEEHHCCHHHHHHHHHHHHCCCEEEECCCEE ILHSNNSFLKMLELDFIENGATFTNFLVKSYNKEKTTDSNIVNLLTATGVKFKAYISQVA EEECCCCEEEEEEEHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHH FYDKNNQSYIYGLLTPINSGIHDYHLHPCFMEAPIAILQCNTDGKIIKSNNTLKRLVKHN EEECCCCEEEEEEEECCCCCCCCCCCCCHHHCCCEEEEEECCCCCEEECCCHHHHHHHCC KEYIYDYVLPSYNKKIKKYLENNIVKDLSLEAQLNNNSYVKIYFNKFIHNNDMLIICYII HHEEEEHHCCCHHHHHHHHHHCCCHHCCEEEEEECCCCEEEEEEEEEECCCCEEEEEEEE DSKDRKNLEIQLEQSQKMQAIGQLAGGIAHDFNNILTAIIGFCDLLLIKHSTTDPSFSDI CCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHH MQIKQNANRATNLIKQLLAFSRKQTLQPKILDINNIIADLIHMIKRLINESIELKIQYEQ HHHHHCCHHHHHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHCCCCEEEEEEECC NINLIKADLCQLEQVIINLVVNARSAMETGGQLTIKTYNIKADALKVLLKDMFSPDKEQI CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHCCCCHHHC EDGEYVAIEISDTGHGMEEKVMKKIFDPFFSTKKTTEGIGLGLSTVYGIVKQTDGYIYVT CCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCEEEEE STINIGTTFIILLPTVHLLHNTNNTNLESNQDSEYIGAVTQEINNTTKNILLIEDEDPVR EEECCCCEEEHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCEE IFATKALVKKGFNVIDINCGDKAIDIIKNQNIDIVISDVVMPKISGPEIIDQILKIQPNI EEEEHHHHHCCCCEEEECCCCHHHHHHCCCCCEEEEECEECCCCCCHHHHHHHHHCCCCE KVIFISGYAEEVFNKHSNIDASKINFLSKPFTLKQLTEKVSEILGSFT EEEEEECCHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKKRHTDNTIHNNKVDFVIRRYGLSVAKLSIFLIIPLLFILVLYVFNIYDSYINIIINCI CCCCCCCCCCCCCCHHEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FTSISILAISIQIKQYLRTIASIEYQNMIFANALNHNTEFCLIIKNNGEIVYADARFYER HHHHHHHHHHHHHHHHHHHHHHCHHHHHHEEHHCCCCCCEEEEEECCCCEEEECHHHHHH FIKNQDKKLDLPTILKLGNISNQEIELFNNALKNKSSIHTYFSLNTKNKTSNFTLILDPV HHCCCCCCCCCHHHHEECCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCCEEEEEECC VENPEIEVNCTKITNLFFTPIARPQEYFVLKAVKISKEQVYERLIQEHCVGAYLLNSRGV CCCCCEEEEEEEEEEEHCCCCCCCCHHEEEEEHHCCHHHHHHHHHHHHCCCEEEECCCEE ILHSNNSFLKMLELDFIENGATFTNFLVKSYNKEKTTDSNIVNLLTATGVKFKAYISQVA EEECCCCEEEEEEEHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHH FYDKNNQSYIYGLLTPINSGIHDYHLHPCFMEAPIAILQCNTDGKIIKSNNTLKRLVKHN EEECCCCEEEEEEEECCCCCCCCCCCCCHHHCCCEEEEEECCCCCEEECCCHHHHHHHCC KEYIYDYVLPSYNKKIKKYLENNIVKDLSLEAQLNNNSYVKIYFNKFIHNNDMLIICYII HHEEEEHHCCCHHHHHHHHHHCCCHHCCEEEEEECCCCEEEEEEEEEECCCCEEEEEEEE DSKDRKNLEIQLEQSQKMQAIGQLAGGIAHDFNNILTAIIGFCDLLLIKHSTTDPSFSDI CCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHH MQIKQNANRATNLIKQLLAFSRKQTLQPKILDINNIIADLIHMIKRLINESIELKIQYEQ HHHHHCCHHHHHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHCCCCEEEEEEECC NINLIKADLCQLEQVIINLVVNARSAMETGGQLTIKTYNIKADALKVLLKDMFSPDKEQI CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHCCCCHHHC EDGEYVAIEISDTGHGMEEKVMKKIFDPFFSTKKTTEGIGLGLSTVYGIVKQTDGYIYVT CCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCEEEEE STINIGTTFIILLPTVHLLHNTNNTNLESNQDSEYIGAVTQEINNTTKNILLIEDEDPVR EEECCCCEEEHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCEE IFATKALVKKGFNVIDINCGDKAIDIIKNQNIDIVISDVVMPKISGPEIIDQILKIQPNI EEEEHHHHHCCCCEEEECCCCHHHHHHCCCCCEEEEECEECCCCCCHHHHHHHHHCCCCE KVIFISGYAEEVFNKHSNIDASKINFLSKPFTLKQLTEKVSEILGSFT EEEEEECCHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA