| Definition | Ehrlichia ruminantium str. Gardel, complete genome. |
|---|---|
| Accession | NC_006831 |
| Length | 1,499,920 |
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The map label for this gene is uvrA [H]
Identifier: 58617038
GI number: 58617038
Start: 513291
End: 516170
Strand: Reverse
Name: uvrA [H]
Synonym: ERGA_CDS_03110
Alternate gene names: 58617038
Gene position: 516170-513291 (Counterclockwise)
Preceding gene: 58617039
Following gene: 58617037
Centisome position: 34.41
GC content: 29.86
Gene sequence:
>2880_bases ATGGCTAATTTTATTAGTATACGTAATGCTAAAGAACACAATCTTCGTAATATTTGTATAGATATACCTAAAAATAAACT AATTGTAATAACTGGAGTAAGTGGATCTGGAAAATCAAGTTTAGCATTCGATACAATATATGCTGAAGGACAACGTAGAT ATGTAGAAAATCTATCATCTTATGCTCGTCAGTTTCTTGATTCATGTACAAAACCAGATGTTGAATCAATAACAGGACTT TCACCAGCAATTGCACTTACCCAAAGACCTTTATCAAAAAATTCACGATCAACTGTATCAACTGCTACAGAAATTTATGA CTATTTAAGGTTGATGTACTCTAAGATAGGTATCCCACATTCTCCTAGTACTGGATTACCAATAACAAAACAATCTACAC ATCAAATAATAGATCAAGTATTAAAATTACCACTAGGCACAGAAATTCTAATTTTAGGAGCATTAATCAGAAACAAAAAA GGAGAACATCAAAAAGAAATCCTAGAAATAAAAAAACAAAATTATCAATACCTAAAGATCAACGGTACTATACACGATAT TAATAATATACCTAAATTAGATAGAAATAAAAAACATAATATCTGTGTTATTATAGAAAAAGCAATACTATCAGAAAGCT CTCTCAATAGTATAGCTGATAGCATAACAACAGCATTAAAAATAGGAAATGGTATAATTCATGTAGAAATACTAAATTTA CCAGAAAGCTATAACAATCAAAAATATCATCAAAATCAAATACTAACTTTTTCAGAAAATTTTTCATGTCCTGAAACAGA TTTTAACATAGAAGAAATAGAACCAAGATTATTTTCGTTTAACACTTCATATGGCTCATGCAAAAGCTGTGAAGGAACAG GAAAAACTTACAGTATCGATAAAAATCTTATTATAACCAATGACAATTTATCAATATTAGAAGGAGCTATACACCCAATT GGCCCAATTAATTTACAAGTCCTTCACCATAAAATTAATTCTAATTTTAGCTATCATTATGCAAATATCATTCTATCCTT AGCAAAATATTATAACTTTGATATAACACAACCATGGAAAGAACTTAACAATAATATACAAGATATTATTTTATTTGGTA CCAATGGAGTACCAATACCTATATCTTATCACAACGAAGAATATAAATATTCTCAGAACAGACAATTTGATGGCATAATA AACATATTAAATAATAAAAAAGATATAATAACTGAAAGGATAGCTGAACAATATTTATCTATAAACACATGTAGTACATG CCAAGGTTTTAGATTGCGACCTGAAGCCCTATCAGTAAAAATCAATAATAAACATATAGGAGAAATTACAAAACTATCTG TAGTAGAAGCAATATCATGGTGTCAAGCCTTATTATCCCAACTTACTGGTCAACAAAGAGATATTTCACAAAAGTTACTC GATGAAATAATTAGAAGATTAACATTTCTCAAAAATGTTGGACTAGGTTATTTAACACTTAGCCGTGAGTCAGGAACATT ATCCGGAGGAGAAGGTCAAAGAATAAAACTAGCATCACAAATTGGATCAGGACTCACAGGAATAATTTATGTATTAGATG AACCATCAATCGGCCTTCATCAAAAAGACAATGCATTGTTAATTAGTACTTTAAAAAAACTACGCGATCTAGAAAATACA GTAATCGTTGTCGAACATGATGAAGAAACAATGGAAAATGCAGACTATATAATAGACATGGGCCCAGGAGCAGGACAAAA TGGAGGACATGTAATAGCAAGTGGAACACTAAAAGATATACTCAACAATACCAATAGCATCACCGGACAATATCTAAGTA AGAAAAAAGTAATACCATATTTCAAAAAAAATAAAACTTTTGATCAATGGATTAAAATCACCGGAGCACGAGAAAACAAC TTACGCAATATTGATGCACAGATTCCTCTGAATGCTCTAACATGTATTACTGGAGTTTCAGGTAGCGGAAAATCTAGTTT AATAAATAATACTTTATATAAATATGCTATTAATAAACTAAATAACATAAACTGGATACATAATAAATGTACATCTATAT CAGGGTTAGAACATATAGATAAAATACTTCTAATAGATCAATCACCTATTGGAAGAACTCCTTTATCAAACCCTGCAACT TACATAGGATTATTTACCTATATCAGATCATGGTTTGCTGGATTACCACTATCTAAAACAAGAGGATATAATATAAGCAG ATTTTCTTTTAACTCAAAAGGAGGAAGATGTGAAACATGTAAAGGTGACGGACAAATAAAAATAGAAATGCATTTCTTAC CTGATGTACATGTAAAATGCGAACAATGCAAAGGTAAACGTTATAACAAAGAAACACTAGAAATAACATATAAAGGAAAA TCAATAGCTGATGTATTAAACATGACAGTTGATCAAGCATACGAATTTTTCATAGACTTACCATTAATTAAAGAGAAACT AGATTCTTTACGTAGCATAGGAATGGGTTATATAAAAATTGGCCAGACATCTAATACGTTATCAGGAGGTGAAGCACAAC GAATAAAGTTATCTAGAGAATTATCAAAACGAGCTACAGGTAAAACCCTATACATATTAGATGAACCAACTACAGGATTA CATCTTGCAGATATAAATAACTTACTATATGTTTTACATACACTCTGTGATTTAGGAAATACAATAATAGTAATTGAACA TAATTTACATGTAATAAAAACAGCAGAATATATAATAGATATGGGCCCAAATGGAGGAGATGAAGGAGGTAGAATTATAG CAACTGGAACTCCACAGGAAATAATAGAAAACCCTCAAAGTATAACTGGACAATATTTAAAACAATACTTACAAGTATAA
Upstream 100 bases:
>100_bases ATGTCTTCTTTTATATAAAAATTTAGATGAACAATTACCATTCTTCATATATTATAATATCTTTAATTTTAATCTGACAG TCATGATGGTAATGTAAAAT
Downstream 100 bases:
>100_bases AATACAAATTAACTTTTATAATCAATTTTAAATACAATATAATACATAGGATAGTGTTATGTAATAACATAATATTTTTT AATAATTAAATAATTGTCTA
Product: UvrABC system protein A (UvrA protein)
Products: NA
Alternate protein names: UvrA protein; Excinuclease ABC subunit A [H]
Number of amino acids: Translated: 959; Mature: 958
Protein sequence:
>959_residues MANFISIRNAKEHNLRNICIDIPKNKLIVITGVSGSGKSSLAFDTIYAEGQRRYVENLSSYARQFLDSCTKPDVESITGL SPAIALTQRPLSKNSRSTVSTATEIYDYLRLMYSKIGIPHSPSTGLPITKQSTHQIIDQVLKLPLGTEILILGALIRNKK GEHQKEILEIKKQNYQYLKINGTIHDINNIPKLDRNKKHNICVIIEKAILSESSLNSIADSITTALKIGNGIIHVEILNL PESYNNQKYHQNQILTFSENFSCPETDFNIEEIEPRLFSFNTSYGSCKSCEGTGKTYSIDKNLIITNDNLSILEGAIHPI GPINLQVLHHKINSNFSYHYANIILSLAKYYNFDITQPWKELNNNIQDIILFGTNGVPIPISYHNEEYKYSQNRQFDGII NILNNKKDIITERIAEQYLSINTCSTCQGFRLRPEALSVKINNKHIGEITKLSVVEAISWCQALLSQLTGQQRDISQKLL DEIIRRLTFLKNVGLGYLTLSRESGTLSGGEGQRIKLASQIGSGLTGIIYVLDEPSIGLHQKDNALLISTLKKLRDLENT VIVVEHDEETMENADYIIDMGPGAGQNGGHVIASGTLKDILNNTNSITGQYLSKKKVIPYFKKNKTFDQWIKITGARENN LRNIDAQIPLNALTCITGVSGSGKSSLINNTLYKYAINKLNNINWIHNKCTSISGLEHIDKILLIDQSPIGRTPLSNPAT YIGLFTYIRSWFAGLPLSKTRGYNISRFSFNSKGGRCETCKGDGQIKIEMHFLPDVHVKCEQCKGKRYNKETLEITYKGK SIADVLNMTVDQAYEFFIDLPLIKEKLDSLRSIGMGYIKIGQTSNTLSGGEAQRIKLSRELSKRATGKTLYILDEPTTGL HLADINNLLYVLHTLCDLGNTIIVIEHNLHVIKTAEYIIDMGPNGGDEGGRIIATGTPQEIIENPQSITGQYLKQYLQV
Sequences:
>Translated_959_residues MANFISIRNAKEHNLRNICIDIPKNKLIVITGVSGSGKSSLAFDTIYAEGQRRYVENLSSYARQFLDSCTKPDVESITGL SPAIALTQRPLSKNSRSTVSTATEIYDYLRLMYSKIGIPHSPSTGLPITKQSTHQIIDQVLKLPLGTEILILGALIRNKK GEHQKEILEIKKQNYQYLKINGTIHDINNIPKLDRNKKHNICVIIEKAILSESSLNSIADSITTALKIGNGIIHVEILNL PESYNNQKYHQNQILTFSENFSCPETDFNIEEIEPRLFSFNTSYGSCKSCEGTGKTYSIDKNLIITNDNLSILEGAIHPI GPINLQVLHHKINSNFSYHYANIILSLAKYYNFDITQPWKELNNNIQDIILFGTNGVPIPISYHNEEYKYSQNRQFDGII NILNNKKDIITERIAEQYLSINTCSTCQGFRLRPEALSVKINNKHIGEITKLSVVEAISWCQALLSQLTGQQRDISQKLL DEIIRRLTFLKNVGLGYLTLSRESGTLSGGEGQRIKLASQIGSGLTGIIYVLDEPSIGLHQKDNALLISTLKKLRDLENT VIVVEHDEETMENADYIIDMGPGAGQNGGHVIASGTLKDILNNTNSITGQYLSKKKVIPYFKKNKTFDQWIKITGARENN LRNIDAQIPLNALTCITGVSGSGKSSLINNTLYKYAINKLNNINWIHNKCTSISGLEHIDKILLIDQSPIGRTPLSNPAT YIGLFTYIRSWFAGLPLSKTRGYNISRFSFNSKGGRCETCKGDGQIKIEMHFLPDVHVKCEQCKGKRYNKETLEITYKGK SIADVLNMTVDQAYEFFIDLPLIKEKLDSLRSIGMGYIKIGQTSNTLSGGEAQRIKLSRELSKRATGKTLYILDEPTTGL HLADINNLLYVLHTLCDLGNTIIVIEHNLHVIKTAEYIIDMGPNGGDEGGRIIATGTPQEIIENPQSITGQYLKQYLQV >Mature_958_residues ANFISIRNAKEHNLRNICIDIPKNKLIVITGVSGSGKSSLAFDTIYAEGQRRYVENLSSYARQFLDSCTKPDVESITGLS PAIALTQRPLSKNSRSTVSTATEIYDYLRLMYSKIGIPHSPSTGLPITKQSTHQIIDQVLKLPLGTEILILGALIRNKKG EHQKEILEIKKQNYQYLKINGTIHDINNIPKLDRNKKHNICVIIEKAILSESSLNSIADSITTALKIGNGIIHVEILNLP ESYNNQKYHQNQILTFSENFSCPETDFNIEEIEPRLFSFNTSYGSCKSCEGTGKTYSIDKNLIITNDNLSILEGAIHPIG PINLQVLHHKINSNFSYHYANIILSLAKYYNFDITQPWKELNNNIQDIILFGTNGVPIPISYHNEEYKYSQNRQFDGIIN ILNNKKDIITERIAEQYLSINTCSTCQGFRLRPEALSVKINNKHIGEITKLSVVEAISWCQALLSQLTGQQRDISQKLLD EIIRRLTFLKNVGLGYLTLSRESGTLSGGEGQRIKLASQIGSGLTGIIYVLDEPSIGLHQKDNALLISTLKKLRDLENTV IVVEHDEETMENADYIIDMGPGAGQNGGHVIASGTLKDILNNTNSITGQYLSKKKVIPYFKKNKTFDQWIKITGARENNL RNIDAQIPLNALTCITGVSGSGKSSLINNTLYKYAINKLNNINWIHNKCTSISGLEHIDKILLIDQSPIGRTPLSNPATY IGLFTYIRSWFAGLPLSKTRGYNISRFSFNSKGGRCETCKGDGQIKIEMHFLPDVHVKCEQCKGKRYNKETLEITYKGKS IADVLNMTVDQAYEFFIDLPLIKEKLDSLRSIGMGYIKIGQTSNTLSGGEAQRIKLSRELSKRATGKTLYILDEPTTGLH LADINNLLYVLHTLCDLGNTIIVIEHNLHVIKTAEYIIDMGPNGGDEGGRIIATGTPQEIIENPQSITGQYLKQYLQV
Specific function: The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion h
COG id: COG0178
COG function: function code L; Excinuclease ATPase subunit
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transporter domains [H]
Homologues:
Organism=Escherichia coli, GI2367343, Length=961, Percent_Identity=49.531737773153, Blast_Score=935, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR013815 - InterPro: IPR004602 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 107185; Mature: 107054
Theoretical pI: Translated: 8.54; Mature: 8.54
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANFISIRNAKEHNLRNICIDIPKNKLIVITGVSGSGKSSLAFDTIYAEGQRRYVENLSS CCCEEECCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCEEEEHHHHHHHHHHHHHHHH YARQFLDSCTKPDVESITGLSPAIALTQRPLSKNSRSTVSTATEIYDYLRLMYSKIGIPH HHHHHHHHCCCCCHHHHCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC SPSTGLPITKQSTHQIIDQVLKLPLGTEILILGALIRNKKGEHQKEILEIKKQNYQYLKI CCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEE NGTIHDINNIPKLDRNKKHNICVIIEKAILSESSLNSIADSITTALKIGNGIIHVEILNL CCEEECCCCCCCCCCCCCCCEEEEEEHHHHCHHHHHHHHHHHHHHHHHCCCEEEEEEEEC PESYNNQKYHQNQILTFSENFSCPETDFNIEEIEPRLFSFNTSYGSCKSCEGTGKTYSID CCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHCCCEEEEEECCCCCCCCCCCCCCEEEEC KNLIITNDNLSILEGAIHPIGPINLQVLHHKINSNFSYHYANIILSLAKYYNFDITQPWK CCEEEECCCHHHHHCCCCCCCCCEEEEEEEHHCCCCCHHHHHHHHHHHHHHCCCCCCCHH ELNNNIQDIILFGTNGVPIPISYHNEEYKYSQNRQFDGIINILNNKKDIITERIAEQYLS HHCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHC INTCSTCQGFRLRPEALSVKINNKHIGEITKLSVVEAISWCQALLSQLTGQQRDISQKLL CCCCCCCCCCEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH DEIIRRLTFLKNVGLGYLTLSRESGTLSGGEGQRIKLASQIGSGLTGIIYVLDEPSIGLH HHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEHHHHCCCCEEEEEEEECCCCCCC QKDNALLISTLKKLRDLENTVIVVEHDEETMENADYIIDMGPGAGQNGGHVIASGTLKDI CCCCCHHHHHHHHHHCCCCEEEEEECCHHHHCCCCEEEECCCCCCCCCCEEEECCHHHHH LNNTNSITGQYLSKKKVIPYFKKNKTFDQWIKITGARENNLRNIDAQIPLNALTCITGVS HCCCCCCCHHHHCCCCCCCHHHCCCCHHHHEEEECCCCCCCCCCCCCCCCHHHHHEECCC GSGKSSLINNTLYKYAINKLNNINWIHNKCTSISGLEHIDKILLIDQSPIGRTPLSNPAT CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHCEEEEEECCCCCCCCCCCCHH YIGLFTYIRSWFAGLPLSKTRGYNISRFSFNSKGGRCETCKGDGQIKIEMHFLPDVHVKC HHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCEEEEEEEECCCCCEEH EQCKGKRYNKETLEITYKGKSIADVLNMTVDQAYEFFIDLPLIKEKLDSLRSIGMGYIKI HHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEE GQTSNTLSGGEAQRIKLSRELSKRATGKTLYILDEPTTGLHLADINNLLYVLHTLCDLGN CCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCEEHHHHHHHHHHHHHHHHCCC TIIVIEHNLHVIKTAEYIIDMGPNGGDEGGRIIATGTPQEIIENPQSITGQYLKQYLQV EEEEEECCCEEEEEEEEEEECCCCCCCCCCEEEECCCCHHHHCCCHHHHHHHHHHHHCC >Mature Secondary Structure ANFISIRNAKEHNLRNICIDIPKNKLIVITGVSGSGKSSLAFDTIYAEGQRRYVENLSS CCEEECCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCEEEEHHHHHHHHHHHHHHHH YARQFLDSCTKPDVESITGLSPAIALTQRPLSKNSRSTVSTATEIYDYLRLMYSKIGIPH HHHHHHHHCCCCCHHHHCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC SPSTGLPITKQSTHQIIDQVLKLPLGTEILILGALIRNKKGEHQKEILEIKKQNYQYLKI CCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEE NGTIHDINNIPKLDRNKKHNICVIIEKAILSESSLNSIADSITTALKIGNGIIHVEILNL CCEEECCCCCCCCCCCCCCCEEEEEEHHHHCHHHHHHHHHHHHHHHHHCCCEEEEEEEEC PESYNNQKYHQNQILTFSENFSCPETDFNIEEIEPRLFSFNTSYGSCKSCEGTGKTYSID CCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHCCCEEEEEECCCCCCCCCCCCCCEEEEC KNLIITNDNLSILEGAIHPIGPINLQVLHHKINSNFSYHYANIILSLAKYYNFDITQPWK CCEEEECCCHHHHHCCCCCCCCCEEEEEEEHHCCCCCHHHHHHHHHHHHHHCCCCCCCHH ELNNNIQDIILFGTNGVPIPISYHNEEYKYSQNRQFDGIINILNNKKDIITERIAEQYLS HHCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHC INTCSTCQGFRLRPEALSVKINNKHIGEITKLSVVEAISWCQALLSQLTGQQRDISQKLL CCCCCCCCCCEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH DEIIRRLTFLKNVGLGYLTLSRESGTLSGGEGQRIKLASQIGSGLTGIIYVLDEPSIGLH HHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEHHHHCCCCEEEEEEEECCCCCCC QKDNALLISTLKKLRDLENTVIVVEHDEETMENADYIIDMGPGAGQNGGHVIASGTLKDI CCCCCHHHHHHHHHHCCCCEEEEEECCHHHHCCCCEEEECCCCCCCCCCEEEECCHHHHH LNNTNSITGQYLSKKKVIPYFKKNKTFDQWIKITGARENNLRNIDAQIPLNALTCITGVS HCCCCCCCHHHHCCCCCCCHHHCCCCHHHHEEEECCCCCCCCCCCCCCCCHHHHHEECCC GSGKSSLINNTLYKYAINKLNNINWIHNKCTSISGLEHIDKILLIDQSPIGRTPLSNPAT CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHCEEEEEECCCCCCCCCCCCHH YIGLFTYIRSWFAGLPLSKTRGYNISRFSFNSKGGRCETCKGDGQIKIEMHFLPDVHVKC HHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCEEEEEEEECCCCCEEH EQCKGKRYNKETLEITYKGKSIADVLNMTVDQAYEFFIDLPLIKEKLDSLRSIGMGYIKI HHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEE GQTSNTLSGGEAQRIKLSRELSKRATGKTLYILDEPTTGLHLADINNLLYVLHTLCDLGN CCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCEEHHHHHHHHHHHHHHHHCCC TIIVIEHNLHVIKTAEYIIDMGPNGGDEGGRIIATGTPQEIIENPQSITGQYLKQYLQV EEEEEECCCEEEEEEEEEEECCCCCCCCCCEEEECCCCHHHHCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: Hydrolase; Acting on ester bonds [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11557893 [H]