Definition Ehrlichia ruminantium str. Gardel, complete genome.
Accession NC_006831
Length 1,499,920

Click here to switch to the map view.

The map label for this gene is 58616981

Identifier: 58616981

GI number: 58616981

Start: 417601

End: 418128

Strand: Reverse

Name: 58616981

Synonym: ERGA_CDS_02540

Alternate gene names: NA

Gene position: 418128-417601 (Counterclockwise)

Preceding gene: 58616984

Following gene: 58616980

Centisome position: 27.88

GC content: 29.92

Gene sequence:

>528_bases
ATGTTGAGACTTAGTTTTATATTTATAATGTTAATCACATTACTTACATACCAGAATGGGTATTCTGCAAAATCCCCTGA
TCCTGTGAACATAAAACTAATAGTAGGATCAATGGATATGAAAAATAGAACTATCAACATAGGAGTTGAATTTAGAATTC
AGGATGGATGGCATATTTATTATAAATCACCAGGAGATCTTGGATTGCCAACAGTATTTCAATGGCAAGAGAACATTTTT
AAAGATGTACAAATACACTGGCCACAACCTATACAACACACAGATACAACAAGTAACAACATCTTCCATAGCAATGTTTA
CAAAGACATTGTAATGTTCCCTATTTCATTTGCTCTCAAACATGACAACCTAAACAATAAAGAACTAAGTATTAGTTTAC
GTATCAAATACGCAGTATGCAAGGATGTATGTATTCCCCAAGAAAAAGTTATTATATTAAATCGTTTTTTACAGGATTAC
GTTAATCAAGAAAATTTAGGATTAATAAATTTTTGGAAAAAAAAATAA

Upstream 100 bases:

>100_bases
CTAGGTATATAGAACTCTATCAATAAAAACCACAATAGATTCGATCTTGAAGAACATAATAATATGAGTTATCATAACAG
CATGTAATCTTAGGGAGATC

Downstream 100 bases:

>100_bases
CACTCTAAAGAGTAATAAGACTAATTACACACAATACGTTTAGTAAAACAACAACATAACTACAACACTATTTATCAAAG
TAAATATATATTTCTTAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MLRLSFIFIMLITLLTYQNGYSAKSPDPVNIKLIVGSMDMKNRTINIGVEFRIQDGWHIYYKSPGDLGLPTVFQWQENIF
KDVQIHWPQPIQHTDTTSNNIFHSNVYKDIVMFPISFALKHDNLNNKELSISLRIKYAVCKDVCIPQEKVIILNRFLQDY
VNQENLGLINFWKKK

Sequences:

>Translated_175_residues
MLRLSFIFIMLITLLTYQNGYSAKSPDPVNIKLIVGSMDMKNRTINIGVEFRIQDGWHIYYKSPGDLGLPTVFQWQENIF
KDVQIHWPQPIQHTDTTSNNIFHSNVYKDIVMFPISFALKHDNLNNKELSISLRIKYAVCKDVCIPQEKVIILNRFLQDY
VNQENLGLINFWKKK
>Mature_175_residues
MLRLSFIFIMLITLLTYQNGYSAKSPDPVNIKLIVGSMDMKNRTINIGVEFRIQDGWHIYYKSPGDLGLPTVFQWQENIF
KDVQIHWPQPIQHTDTTSNNIFHSNVYKDIVMFPISFALKHDNLNNKELSISLRIKYAVCKDVCIPQEKVIILNRFLQDY
VNQENLGLINFWKKK

Specific function: Unknown

COG id: COG4233

COG function: function code OC; Uncharacterized protein predicted to be involved in C-type cytochrome biogenesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20535; Mature: 20535

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRLSFIFIMLITLLTYQNGYSAKSPDPVNIKLIVGSMDMKNRTINIGVEFRIQDGWHIY
CEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEEEEEECCEEEE
YKSPGDLGLPTVFQWQENIFKDVQIHWPQPIQHTDTTSNNIFHSNVYKDIVMFPISFALK
EECCCCCCCCCHHHHHHHHHCCEEEECCCCCCCCCCCCCCEEEHHHHHHHHHHHEEEEEE
HDNLNNKELSISLRIKYAVCKDVCIPQEKVIILNRFLQDYVNQENLGLINFWKKK
CCCCCCCEEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCC
>Mature Secondary Structure
MLRLSFIFIMLITLLTYQNGYSAKSPDPVNIKLIVGSMDMKNRTINIGVEFRIQDGWHIY
CEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEEEEEECCEEEE
YKSPGDLGLPTVFQWQENIFKDVQIHWPQPIQHTDTTSNNIFHSNVYKDIVMFPISFALK
EECCCCCCCCCHHHHHHHHHCCEEEECCCCCCCCCCCCCCEEEHHHHHHHHHHHEEEEEE
HDNLNNKELSISLRIKYAVCKDVCIPQEKVIILNRFLQDYVNQENLGLINFWKKK
CCCCCCCEEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA