| Definition | Ehrlichia ruminantium str. Gardel, complete genome. |
|---|---|
| Accession | NC_006831 |
| Length | 1,499,920 |
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The map label for this gene is 58616955
Identifier: 58616955
GI number: 58616955
Start: 373107
End: 374219
Strand: Reverse
Name: 58616955
Synonym: ERGA_CDS_02280
Alternate gene names: NA
Gene position: 374219-373107 (Counterclockwise)
Preceding gene: 58616962
Following gene: 58616954
Centisome position: 24.95
GC content: 24.08
Gene sequence:
>1113_bases ATGTTATCAATTTGTTACAATAAAATAACTAATAGTTATACTATAGTCAAAATTATCACTTTTTTAATAATTTCTGTATT TCCAATATTATTAATACCAATTATAGCATTATATAGTGTACTTAACCACATATTTGATAGCAATATTTTCAAACAACATT TTAAATCCTTTTCTATAAAAAACTTAAAAGCAATTTTAACACCTAAACATGTCAGTTATTCAATAAAAACAGGCTTACAA ACATTAATAGACATTCAAAATATAAGTATTGAAATAAATGGCTATGAAATTGATATCAATTATATACAAACAAAATTCAA CGAATATATCAATTATAGAAATATAAGAAACATACCACGACGTATGTTAACTCATATAGAATACATATCAAAAAAATGTA ATATGACATATGAACAAGTTCAAAAGAAATTTTTTTATCGAATTATTTTAGCGTTAATACTTGAAGACCTTATAGCAGAA TACAAACACGAAACAACTGATAACATACCTTACCCTAAACCTAATCCAAAAATTATTCATGAGATAATAACACGATGCAA TACAGAAAATTACTTTAACGCACCTAAACATATTACCGGTAATATACTCAATATAAAACACCATTTATTTTTGAGAGAAC ATGGATACTCTAAAATTAAAATATCACTAGATACTATATTATTTACACCAAAAGATAGTAACACTATAGTATGTAATATT ACAGAAGAACTACAAATACCAGAAAAATACCAAAAATATTTTATATTAGACAAAGCAAAGTCATTTATTTCATCACTTAC ATTTACAATAGATGCAGAATCACAAAAAAATGACATATCATATAAAAATATAAGTTTTGAATTGAGCACTCCTATTAATC TCAAGAAATATACCATAAAAACATATTATAGAAATTTAGGAAAAAAACCAAAAAACCATGCCGTATTAAGTGAGATAGAT ACATATAATAGCAGAATACATTTTTTATACGATTTTCCAGATTTGCAATCTTCTAATTCTCTATCGTTATATAATGATAA CACTATACAATATTCTGATGAGATATTAGAGTTAAGAAATACCAGAAATTCAGGCTCTTCTTATCATAGATAG
Upstream 100 bases:
>100_bases AACTTTCTAAAAAAAAAAAAATAAAGTAATATTAATTAATATACTATCTATTATATTATTCTATATAATTAAATTATCAC TAATTAACATTTATTAAATA
Downstream 100 bases:
>100_bases ATAATATAACCTTATTACCTAATAAAAAATGAATTGCAATTTTTCTGCAATATATAGCAACAACATACATTCTATAACAA ATAATAAACTGCTCAAAATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 370; Mature: 370
Protein sequence:
>370_residues MLSICYNKITNSYTIVKIITFLIISVFPILLIPIIALYSVLNHIFDSNIFKQHFKSFSIKNLKAILTPKHVSYSIKTGLQ TLIDIQNISIEINGYEIDINYIQTKFNEYINYRNIRNIPRRMLTHIEYISKKCNMTYEQVQKKFFYRIILALILEDLIAE YKHETTDNIPYPKPNPKIIHEIITRCNTENYFNAPKHITGNILNIKHHLFLREHGYSKIKISLDTILFTPKDSNTIVCNI TEELQIPEKYQKYFILDKAKSFISSLTFTIDAESQKNDISYKNISFELSTPINLKKYTIKTYYRNLGKKPKNHAVLSEID TYNSRIHFLYDFPDLQSSNSLSLYNDNTIQYSDEILELRNTRNSGSSYHR
Sequences:
>Translated_370_residues MLSICYNKITNSYTIVKIITFLIISVFPILLIPIIALYSVLNHIFDSNIFKQHFKSFSIKNLKAILTPKHVSYSIKTGLQ TLIDIQNISIEINGYEIDINYIQTKFNEYINYRNIRNIPRRMLTHIEYISKKCNMTYEQVQKKFFYRIILALILEDLIAE YKHETTDNIPYPKPNPKIIHEIITRCNTENYFNAPKHITGNILNIKHHLFLREHGYSKIKISLDTILFTPKDSNTIVCNI TEELQIPEKYQKYFILDKAKSFISSLTFTIDAESQKNDISYKNISFELSTPINLKKYTIKTYYRNLGKKPKNHAVLSEID TYNSRIHFLYDFPDLQSSNSLSLYNDNTIQYSDEILELRNTRNSGSSYHR >Mature_370_residues MLSICYNKITNSYTIVKIITFLIISVFPILLIPIIALYSVLNHIFDSNIFKQHFKSFSIKNLKAILTPKHVSYSIKTGLQ TLIDIQNISIEINGYEIDINYIQTKFNEYINYRNIRNIPRRMLTHIEYISKKCNMTYEQVQKKFFYRIILALILEDLIAE YKHETTDNIPYPKPNPKIIHEIITRCNTENYFNAPKHITGNILNIKHHLFLREHGYSKIKISLDTILFTPKDSNTIVCNI TEELQIPEKYQKYFILDKAKSFISSLTFTIDAESQKNDISYKNISFELSTPINLKKYTIKTYYRNLGKKPKNHAVLSEID TYNSRIHFLYDFPDLQSSNSLSLYNDNTIQYSDEILELRNTRNSGSSYHR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43548; Mature: 43548
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSICYNKITNSYTIVKIITFLIISVFPILLIPIIALYSVLNHIFDSNIFKQHFKSFSIK CCEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCC NLKAILTPKHVSYSIKTGLQTLIDIQNISIEINGYEIDINYIQTKFNEYINYRNIRNIPR CHHEEECCCCCEEEHHHHHHHHHHHEEEEEEEEEEEEEHHHHHHHHHHHHCCCHHHHHHH RMLTHIEYISKKCNMTYEQVQKKFFYRIILALILEDLIAEYKHETTDNIPYPKPNPKIIH HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH EIITRCNTENYFNAPKHITGNILNIKHHLFLREHGYSKIKISLDTILFTPKDSNTIVCNI HHHHHCCCCCCCCCCCCCCCCEEEEHHEEEEEECCCCEEEEEEEEEEECCCCCCEEEEEE TEELQIPEKYQKYFILDKAKSFISSLTFTIDAESQKNDISYKNISFELSTPINLKKYTIK HHHCCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCEEEEEEEECCCCCCHHHHHH TYYRNLGKKPKNHAVLSEIDTYNSRIHFLYDFPDLQSSNSLSLYNDNTIQYSDEILELRN HHHHHHCCCCCCCHHHHHHHCCCCEEEEEEECCCCCCCCCEEEECCCCEEHHHHHHHHHH TRNSGSSYHR CCCCCCCCCC >Mature Secondary Structure MLSICYNKITNSYTIVKIITFLIISVFPILLIPIIALYSVLNHIFDSNIFKQHFKSFSIK CCEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCC NLKAILTPKHVSYSIKTGLQTLIDIQNISIEINGYEIDINYIQTKFNEYINYRNIRNIPR CHHEEECCCCCEEEHHHHHHHHHHHEEEEEEEEEEEEEHHHHHHHHHHHHCCCHHHHHHH RMLTHIEYISKKCNMTYEQVQKKFFYRIILALILEDLIAEYKHETTDNIPYPKPNPKIIH HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH EIITRCNTENYFNAPKHITGNILNIKHHLFLREHGYSKIKISLDTILFTPKDSNTIVCNI HHHHHCCCCCCCCCCCCCCCCEEEEHHEEEEEECCCCEEEEEEEEEEECCCCCCEEEEEE TEELQIPEKYQKYFILDKAKSFISSLTFTIDAESQKNDISYKNISFELSTPINLKKYTIK HHHCCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCEEEEEEEECCCCCCHHHHHH TYYRNLGKKPKNHAVLSEIDTYNSRIHFLYDFPDLQSSNSLSLYNDNTIQYSDEILELRN HHHHHHCCCCCCCHHHHHHHCCCCEEEEEEECCCCCCCCCEEEECCCCEEHHHHHHHHHH TRNSGSSYHR CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA