| Definition | Ehrlichia ruminantium str. Gardel, complete genome. |
|---|---|
| Accession | NC_006831 |
| Length | 1,499,920 |
Click here to switch to the map view.
The map label for this gene is 58616804
Identifier: 58616804
GI number: 58616804
Start: 124819
End: 126060
Strand: Reverse
Name: 58616804
Synonym: ERGA_CDS_00770
Alternate gene names: NA
Gene position: 126060-124819 (Counterclockwise)
Preceding gene: 58616805
Following gene: 58616803
Centisome position: 8.4
GC content: 28.74
Gene sequence:
>1242_bases ATGATTACAAGTGTTTTAATATTTTTAGTCATAGCATTAACCGTAGGATTATGGGCAATAGATTGTGACGGTATTGTAAG GATAGAATGGCTGAATTATAATATTGAAATAAATATTCTGTTTGCACTGTGTATTATTGCTGTTATTTTTCTTTTTGTTA TTCTCCTAATTAGATTAGTCTTCTATGTTTGTCAGTGTTTTTATGGTTGTAAAAAACGTAGACAAGATAAAAGAATCATA CTCCTAGATCAAGGGTATATGCATTTGAATTGTGGTAATATAGAAAAAGCTGATAAATGTATTACAAAATTACATGATTT TGATCATCCATCCTTATTTCTATTAAAAGGAAGATTCTATTTTGACAGTAATAAATATACTTTGGCAGAAAAATATTTTA TACAATTTAGCAAAGTTGTTCCAATAATAGATGCTACATTAGGCATACATATATTAAATCACATAAAACAAATAGAAGAT CAGTCTAAACAGCTAAGCTTATTTAGAAAAATGCTTGAAATTTTTTATAAACAAGCGTGGTCACCTATTTTTAAGTTAGA GATATGTTGTATATCCAGAGACTGGAATAGCGCAATTGAAGAAATGCATAAGATAATAAAATTAAAGATCAATGTTCCAT ACGACACTCAAGAAACACTTTGTATTTTGTATTATGCGTTAGCAAAACAATATTATACCTACCAAAAATATGATGATGGG TTATATGTATTTGATAATATGAAACATTACTCTAAACATAGAACTGTTATTACACTACTAAGAGCCCAACTTTATATAAA TACTAATAAGAAGCGTAAAGCTATTCAGCTACTTGAATCTGAATATCGTATTAGTCCACATCCTGACATTGCTCACCTCT ATTTAGAAATCATGCACCATGACAGTCAAGCAATACACAGGTTATATAATATTAATAGTGATTATTACTTCAGCATATAT CTTATAGTGCAGGATGCACTAAATCTTGGAGAATACGATTTAGCTATGAAACATTTAAATAATGTTTTCAAGAGCAGAAC TTATCTTTCTTTATACTTTCTGATGCTAAAATTAAAAGTATTGGTACAAGACTATACTGAACTTTTATATTGGACAGACA AAGCCAGCAAAGATGCTATAACAGATCAACATTGGCAATGTAAAAAGTGTAAGTGTATACCTATACATTGGAATTATGAG TGCGATAATTGTAAAGGGTTTAACACTATAGTTTGGGTTTAA
Upstream 100 bases:
>100_bases TATGGATCCAACAACTTGAAGATATAGTTTCTATGGAGAGAAATATATCAGTAATATACGATCAGTTATCAAAATATATA ATTAAATCACCTGGTGTTTC
Downstream 100 bases:
>100_bases AGATCATGGGTATTGGAGATGTAATATTTTTTATTGTATCATGGTGGATTATATTATTTTTAATATTACCTATAAAAGTT GAAGTGCCTGATAACCCAGA
Product: hypothetical protein
Products: NA
Alternate protein names: HemY Domain-Containing Protein
Number of amino acids: Translated: 413; Mature: 413
Protein sequence:
>413_residues MITSVLIFLVIALTVGLWAIDCDGIVRIEWLNYNIEINILFALCIIAVIFLFVILLIRLVFYVCQCFYGCKKRRQDKRII LLDQGYMHLNCGNIEKADKCITKLHDFDHPSLFLLKGRFYFDSNKYTLAEKYFIQFSKVVPIIDATLGIHILNHIKQIED QSKQLSLFRKMLEIFYKQAWSPIFKLEICCISRDWNSAIEEMHKIIKLKINVPYDTQETLCILYYALAKQYYTYQKYDDG LYVFDNMKHYSKHRTVITLLRAQLYINTNKKRKAIQLLESEYRISPHPDIAHLYLEIMHHDSQAIHRLYNINSDYYFSIY LIVQDALNLGEYDLAMKHLNNVFKSRTYLSLYFLMLKLKVLVQDYTELLYWTDKASKDAITDQHWQCKKCKCIPIHWNYE CDNCKGFNTIVWV
Sequences:
>Translated_413_residues MITSVLIFLVIALTVGLWAIDCDGIVRIEWLNYNIEINILFALCIIAVIFLFVILLIRLVFYVCQCFYGCKKRRQDKRII LLDQGYMHLNCGNIEKADKCITKLHDFDHPSLFLLKGRFYFDSNKYTLAEKYFIQFSKVVPIIDATLGIHILNHIKQIED QSKQLSLFRKMLEIFYKQAWSPIFKLEICCISRDWNSAIEEMHKIIKLKINVPYDTQETLCILYYALAKQYYTYQKYDDG LYVFDNMKHYSKHRTVITLLRAQLYINTNKKRKAIQLLESEYRISPHPDIAHLYLEIMHHDSQAIHRLYNINSDYYFSIY LIVQDALNLGEYDLAMKHLNNVFKSRTYLSLYFLMLKLKVLVQDYTELLYWTDKASKDAITDQHWQCKKCKCIPIHWNYE CDNCKGFNTIVWV >Mature_413_residues MITSVLIFLVIALTVGLWAIDCDGIVRIEWLNYNIEINILFALCIIAVIFLFVILLIRLVFYVCQCFYGCKKRRQDKRII LLDQGYMHLNCGNIEKADKCITKLHDFDHPSLFLLKGRFYFDSNKYTLAEKYFIQFSKVVPIIDATLGIHILNHIKQIED QSKQLSLFRKMLEIFYKQAWSPIFKLEICCISRDWNSAIEEMHKIIKLKINVPYDTQETLCILYYALAKQYYTYQKYDDG LYVFDNMKHYSKHRTVITLLRAQLYINTNKKRKAIQLLESEYRISPHPDIAHLYLEIMHHDSQAIHRLYNINSDYYFSIY LIVQDALNLGEYDLAMKHLNNVFKSRTYLSLYFLMLKLKVLVQDYTELLYWTDKASKDAITDQHWQCKKCKCIPIHWNYE CDNCKGFNTIVWV
Specific function: Unknown
COG id: COG3898
COG function: function code S; Uncharacterized membrane-bound protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49214; Mature: 49214
Theoretical pI: Translated: 8.44; Mature: 8.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITSVLIFLVIALTVGLWAIDCDGIVRIEWLNYNIEINILFALCIIAVIFLFVILLIRLV CHHHHHHHHHHHHHHHHEEECCCCEEEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHH FYVCQCFYGCKKRRQDKRIILLDQGYMHLNCGNIEKADKCITKLHDFDHPSLFLLKGRFY HHHHHHHHHHHHCCCCCEEEEEECCEEEEECCCCCHHHHHHHHHHCCCCCCEEEEEEEEE FDSNKYTLAEKYFIQFSKVVPIIDATLGIHILNHIKQIEDQSKQLSLFRKMLEIFYKQAW EECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SPIFKLEICCISRDWNSAIEEMHKIIKLKINVPYDTQETLCILYYALAKQYYTYQKYDDG CCEEEEEEEEEECCHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHEECCCC LYVFDNMKHYSKHRTVITLLRAQLYINTNKKRKAIQLLESEYRISPHPDIAHLYLEIMHH EEEECCCHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHC DSQAIHRLYNINSDYYFSIYLIVQDALNLGEYDLAMKHLNNVFKSRTYLSLYFLMLKLKV CHHHHHHHHCCCCCEEEEEEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVQDYTELLYWTDKASKDAITDQHWQCKKCKCIPIHWNYECDNCKGFNTIVWV HHHHHHHHHEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEC >Mature Secondary Structure MITSVLIFLVIALTVGLWAIDCDGIVRIEWLNYNIEINILFALCIIAVIFLFVILLIRLV CHHHHHHHHHHHHHHHHEEECCCCEEEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHH FYVCQCFYGCKKRRQDKRIILLDQGYMHLNCGNIEKADKCITKLHDFDHPSLFLLKGRFY HHHHHHHHHHHHCCCCCEEEEEECCEEEEECCCCCHHHHHHHHHHCCCCCCEEEEEEEEE FDSNKYTLAEKYFIQFSKVVPIIDATLGIHILNHIKQIEDQSKQLSLFRKMLEIFYKQAW EECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SPIFKLEICCISRDWNSAIEEMHKIIKLKINVPYDTQETLCILYYALAKQYYTYQKYDDG CCEEEEEEEEEECCHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHEECCCC LYVFDNMKHYSKHRTVITLLRAQLYINTNKKRKAIQLLESEYRISPHPDIAHLYLEIMHH EEEECCCHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHC DSQAIHRLYNINSDYYFSIYLIVQDALNLGEYDLAMKHLNNVFKSRTYLSLYFLMLKLKV CHHHHHHHHCCCCCEEEEEEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVQDYTELLYWTDKASKDAITDQHWQCKKCKCIPIHWNYECDNCKGFNTIVWV HHHHHHHHHEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA