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The map label for this gene is xseA [H]

Identifier: 58616752

GI number: 58616752

Start: 29613

End: 29819

Strand: Reverse

Name: xseA [H]

Synonym: ERGA_CDS_00250

Alternate gene names: 58616752

Gene position: 29819-29613 (Counterclockwise)

Preceding gene: 58616753

Following gene: 58616751

Centisome position: 1.99

GC content: 26.09

Gene sequence:

>207_bases
ATGAAATTAAAATTTACCGTTAGTGAAATCACAAAAATTTTTCAAAATTTAGTACATGAAACGTTTAATCATATAAAAGT
TAGAGGAGAAATCAGTAACCTATCACAACCAAAATCTGGACATACATATTTTACATTAAAAGATCATCAAGCAGTACTTA
ATGCAGTATGCTGGAATAATATAAAATTTGAAGTCGTTGTTTTATGA

Upstream 100 bases:

>100_bases
GTAACCAGCAATATAAGTTTGAACACATCATATACTATGCACCAAAGAATACAGATAGTATTCAAATAAAAATAGGAAAT
ATATTTGAAGTTGCTTTCTT

Downstream 100 bases:

>100_bases
TATTAGAATTTACCGTTAGTGAAATCACAAAAATTTTTCAAAATTTAGTACATGAAACATTTAATCATATAAAAGTTAGA
GGAGAAATCAGTAACCTATC

Product: hypothetical protein

Products: NA

Alternate protein names: Exodeoxyribonuclease VII large subunit; Exonuclease VII large subunit [H]

Number of amino acids: Translated: 68; Mature: 68

Protein sequence:

>68_residues
MKLKFTVSEITKIFQNLVHETFNHIKVRGEISNLSQPKSGHTYFTLKDHQAVLNAVCWNNIKFEVVVL

Sequences:

>Translated_68_residues
MKLKFTVSEITKIFQNLVHETFNHIKVRGEISNLSQPKSGHTYFTLKDHQAVLNAVCWNNIKFEVVVL
>Mature_68_residues
MKLKFTVSEITKIFQNLVHETFNHIKVRGEISNLSQPKSGHTYFTLKDHQAVLNAVCWNNIKFEVVVL

Specific function: Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides [H]

COG id: COG1570

COG function: function code L; Exonuclease VII, large subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the xseA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003753
- InterPro:   IPR020579
- InterPro:   IPR004365 [H]

Pfam domain/function: PF02601 Exonuc_VII_L; PF01336 tRNA_anti [H]

EC number: =3.1.11.6 [H]

Molecular weight: Translated: 7885; Mature: 7885

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKFTVSEITKIFQNLVHETFNHIKVRGEISNLSQPKSGHTYFTLKDHQAVLNAVCWNN
CCEEEEHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCEEEEECCHHHHHHHHHCCC
IKFEVVVL
CEEEEEEC
>Mature Secondary Structure
MKLKFTVSEITKIFQNLVHETFNHIKVRGEISNLSQPKSGHTYFTLKDHQAVLNAVCWNN
CCEEEEHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCEEEEECCHHHHHHHHHCCC
IKFEVVVL
CEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA