Definition Bacillus clausii KSM-K16, complete genome.
Accession NC_006582
Length 4,303,871

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The map label for this gene is levD [C]

Identifier: 56965828

GI number: 56965828

Start: 4247581

End: 4247994

Strand: Direct

Name: levD [C]

Synonym: ABC4070

Alternate gene names: 56965828

Gene position: 4247581-4247994 (Clockwise)

Preceding gene: 56965819

Following gene: 56965829

Centisome position: 98.69

GC content: 37.92

Gene sequence:

>414_bases
TTGAAACATTATTTATTCGCATCACATGGGCATTTTGCAAAAGAATTGGTGAGCACGATAAAAATGATTATTGGAGGAGA
TCACTCGTTAAGGTCGGTTAGTTTGGAACCTCACACAAGTGTCCAACAGTTAGAAGGGGAAATTGATGAATTCTTGCAAC
TAGGTGACATGGACCAAGATCAGTACTTTATTTTAACAGATGTACTTGGGGGGAGTGTCACTAACACGTGCAATAAGAAA
GTAGGAAAGAAGAATGTGTACATTATAACGGGCATGAATTTGCCTCTTGCATTGGAGTTATTAAATGCCCCTGCTTCCCT
CGATGTTAGGGAGTCAATTAATAACTGTATTGAGCAAGGCAAGAATGGAATTATATTTGTGAATCAAATGATAGAAGAAC
ATGCTAACTCATAG

Upstream 100 bases:

>100_bases
CACCCAATTCCACAAGCTCTATGCAAATGAGATTTCATTTATTTATTTACACACTAGTTGGCACAACAATTGCAGTAGAA
AATACGAAGGAGGTTATAGA

Downstream 100 bases:

>100_bases
TCGAAGGGAGCAATGAATGATGGTTACATTTTTTAGAGTTGATGATCGATTGATTCATGGACAAGTAGCGTATTCTTGGA
CAAAACATTTAGAAGCAGAA

Product: PTS system, mannose-specific enzyme II, A component

Products: Protein Histidine; Sugar Phosphate.; D-glucosamine-6-phosphate [Cytoplasm]; pyruvate; glucose-6-phosphate [Cytoplasm]; N-acetyl-D-glucosamine-6-phosphate [Cytoplasm]; mannose-6-phosphate [Cytoplasm]; fructose-6-phosphate [Cytoplasm] [C]

Alternate protein names: PTS System Transporter Subunit IIA

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MKHYLFASHGHFAKELVSTIKMIIGGDHSLRSVSLEPHTSVQQLEGEIDEFLQLGDMDQDQYFILTDVLGGSVTNTCNKK
VGKKNVYIITGMNLPLALELLNAPASLDVRESINNCIEQGKNGIIFVNQMIEEHANS

Sequences:

>Translated_137_residues
MKHYLFASHGHFAKELVSTIKMIIGGDHSLRSVSLEPHTSVQQLEGEIDEFLQLGDMDQDQYFILTDVLGGSVTNTCNKK
VGKKNVYIITGMNLPLALELLNAPASLDVRESINNCIEQGKNGIIFVNQMIEEHANS
>Mature_137_residues
MKHYLFASHGHFAKELVSTIKMIIGGDHSLRSVSLEPHTSVQQLEGEIDEFLQLGDMDQDQYFILTDVLGGSVTNTCNKK
VGKKNVYIITGMNLPLALELLNAPASLDVRESINNCIEQGKNGIIFVNQMIEEHANS

Specific function: This Is A Component Of The Phosphoenolpyruvate-Dependent Sugar Phosphotransferase System (Pts), A Major Carbohydrate Active -Transport System. The IIcd Domains Contain The Sugar Binding Site And The Transmembrane Channel; The IIa Domain Contains The Prim

COG id: COG2893

COG function: function code G; Phosphotransferase system, mannose/fructose-specific component IIA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 220 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2880 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 260 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.1.69 [C]

Molecular weight: Translated: 15172; Mature: 15172

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: PS51096 PTS_EIIA_TYPE_4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHYLFASHGHFAKELVSTIKMIIGGDHSLRSVSLEPHTSVQQLEGEIDEFLQLGDMDQD
CCCEEECCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCC
QYFILTDVLGGSVTNTCNKKVGKKNVYIITGMNLPLALELLNAPASLDVRESINNCIEQG
CEEEEEECCCCCHHHHHHHCCCCCCEEEEECCCCCHHHHHHCCCCCCCHHHHHHHHHHHC
KNGIIFVNQMIEEHANS
CCCEEEHHHHHHHHCCC
>Mature Secondary Structure
MKHYLFASHGHFAKELVSTIKMIIGGDHSLRSVSLEPHTSVQQLEGEIDEFLQLGDMDQD
CCCEEECCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCC
QYFILTDVLGGSVTNTCNKKVGKKNVYIITGMNLPLALELLNAPASLDVRESINNCIEQG
CEEEEEECCCCCHHHHHHHCCCCCCEEEEECCCCCHHHHHHCCCCCCCHHHHHHHHHHHC
KNGIIFVNQMIEEHANS
CCCEEEHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Protein N-Phosphohistidine; Sugar; phosphoenolpyruvate; glucosamine [Periplasm]; phosphoenolpyruvate; beta-D-glucose [Periplasm]; N-acetyl-D-glucosamine [Periplasm]; mannose [Periplasm]; fructose [Periplasm] [C]

Specific reaction: Protein N-Phosphohistidine + Sugar = Protein Histidine + Sugar Phosphate. phosphoenolpyruvate + glucosamine [Periplasm] = D-glucosamine-6-phosphate [Cytoplasm] + pyruvate phosphoenolpyruvate + beta-D-glucose [Periplasm] = glucose-6-phosphate [Cytoplasm]

General reaction: Transferring phosphorus-containing groups; Phosphotransferases with an alcohol group as acceptor [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA