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The map label for this gene is lytR [H]

Identifier: 56965581

GI number: 56965581

Start: 3983911

End: 3984831

Strand: Direct

Name: lytR [H]

Synonym: ABC3823

Alternate gene names: 56965581

Gene position: 3983911-3984831 (Clockwise)

Preceding gene: 56965580

Following gene: 56965582

Centisome position: 92.57

GC content: 48.64

Gene sequence:

>921_bases
TTGATGAACTCGTATACAAAAGGAGTCATTGCTTGTTTGGCGGTCGGCTTGCTTTTGTTTGTTGGCTTTGGCTATTCCAT
CTATGAAGCTGTCTTACATGCCAACGACAACATGCATACCCCTCTTCATAGCAGAATCGACAACGGGGGCATTTCTGAAA
AGCGGGAGGCCACCGCAGAGCCAGGCGAACCACTCGCCTTACTAATTGCCGGCATTGATAAAACCGCTGGATCCGGCTAT
GGCCGTTCAGATGCACTAATGGTAGCAACGGTCAATGCCAAAGCACAATCGGTTAAGCTTGTAAGCATCCCACGGGATAC
GAAAGTCCAGATTGCTGGCCGTAGCATGGCCGATAAGCTGAACCATGCCCATGCTTATGGAGGGCCTGATTTAATGGTGC
AAACGGTTGAGGAACTGCTTCATATTCCTATCGACCATTATATTGCCGTTGATATGGACGGCTTTGTTGATGTCATTAAT
ACCCTTGGCGGTGTTTCCGTGGTTAATGAAAAAAGCTTCTCGATCGATGGATACGATTTCCCAAAAGGAACACTCTCACT
GAATGGCGAAAAAGCCCTTGCTTATGTACGGATGCGTAAAGAGGACCCTGCCGGGGATGCAGGTCGGACAAGCCGTCAAC
GCGACGTCATGGAAAGCGCCATCGCTAAAGGTTTGCAAGTTGGCAACTTGGCGAACATCCCTGCGTTTCTACAATCCCTT
AGCGATGCCATCGAAACGGATTTGACACTTACAGAAATGCTCCATTATGTTTCTGCTTATCGCCCTGCCGCACAGTCGAT
TAAGCAGCTTGATGTCGCTTACCGCGAGGAGACAGTCGACGGCCTTTGGTTCGCGGTCTTGCCACAGGAAGAAGTAGAAC
GCATTGGCAATGAATTGCGCACTCATTTAACAATTAATTAA

Upstream 100 bases:

>100_bases
TACACCCCGTGACTTCCGTTGAGACTAAGGATACACATTTGCAGCTTGCTTATTTCTGAAAGCGGGTATGGTAAGAAAGA
CGTTTGGAAAGGATCGTTTT

Downstream 100 bases:

>100_bases
ACGCCATAAAACGAGGAGATAGCATGAATATTGACAAACAACCTAAACGTTACTCGTTTAAGACAGAAGCGGGAAAAACA
GTGGGCGAATTAACCTTTTT

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: Membrane-bound protein lytR [H]

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MMNSYTKGVIACLAVGLLLFVGFGYSIYEAVLHANDNMHTPLHSRIDNGGISEKREATAEPGEPLALLIAGIDKTAGSGY
GRSDALMVATVNAKAQSVKLVSIPRDTKVQIAGRSMADKLNHAHAYGGPDLMVQTVEELLHIPIDHYIAVDMDGFVDVIN
TLGGVSVVNEKSFSIDGYDFPKGTLSLNGEKALAYVRMRKEDPAGDAGRTSRQRDVMESAIAKGLQVGNLANIPAFLQSL
SDAIETDLTLTEMLHYVSAYRPAAQSIKQLDVAYREETVDGLWFAVLPQEEVERIGNELRTHLTIN

Sequences:

>Translated_306_residues
MMNSYTKGVIACLAVGLLLFVGFGYSIYEAVLHANDNMHTPLHSRIDNGGISEKREATAEPGEPLALLIAGIDKTAGSGY
GRSDALMVATVNAKAQSVKLVSIPRDTKVQIAGRSMADKLNHAHAYGGPDLMVQTVEELLHIPIDHYIAVDMDGFVDVIN
TLGGVSVVNEKSFSIDGYDFPKGTLSLNGEKALAYVRMRKEDPAGDAGRTSRQRDVMESAIAKGLQVGNLANIPAFLQSL
SDAIETDLTLTEMLHYVSAYRPAAQSIKQLDVAYREETVDGLWFAVLPQEEVERIGNELRTHLTIN
>Mature_306_residues
MMNSYTKGVIACLAVGLLLFVGFGYSIYEAVLHANDNMHTPLHSRIDNGGISEKREATAEPGEPLALLIAGIDKTAGSGY
GRSDALMVATVNAKAQSVKLVSIPRDTKVQIAGRSMADKLNHAHAYGGPDLMVQTVEELLHIPIDHYIAVDMDGFVDVIN
TLGGVSVVNEKSFSIDGYDFPKGTLSLNGEKALAYVRMRKEDPAGDAGRTSRQRDVMESAIAKGLQVGNLANIPAFLQSL
SDAIETDLTLTEMLHYVSAYRPAAQSIKQLDVAYREETVDGLWFAVLPQEEVERIGNELRTHLTIN

Specific function: Attenuator role for operon expression [H]

COG id: COG1316

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LytR/CpsA/Psr regulatory protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004474 [H]

Pfam domain/function: PF03816 LytR_cpsA_psr [H]

EC number: NA

Molecular weight: Translated: 33158; Mature: 33158

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNSYTKGVIACLAVGLLLFVGFGYSIYEAVLHANDNMHTPLHSRIDNGGISEKREATAE
CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHCCCCCCCCHHHCCCC
PGEPLALLIAGIDKTAGSGYGRSDALMVATVNAKAQSVKLVSIPRDTKVQIAGRSMADKL
CCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCEEEECCHHHHHHH
NHAHAYGGPDLMVQTVEELLHIPIDHYIAVDMDGFVDVINTLGGVSVVNEKSFSIDGYDF
HHHHCCCCHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHCCCEEECCCCCCCCCCCC
PKGTLSLNGEKALAYVRMRKEDPAGDAGRTSRQRDVMESAIAKGLQVGNLANIPAFLQSL
CCCCEEECCCHHEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
SDAIETDLTLTEMLHYVSAYRPAAQSIKQLDVAYREETVDGLWFAVLPQEEVERIGNELR
HHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHH
THLTIN
HHCCCC
>Mature Secondary Structure
MMNSYTKGVIACLAVGLLLFVGFGYSIYEAVLHANDNMHTPLHSRIDNGGISEKREATAE
CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHCCCCCCCCHHHCCCC
PGEPLALLIAGIDKTAGSGYGRSDALMVATVNAKAQSVKLVSIPRDTKVQIAGRSMADKL
CCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCEEEECCHHHHHHH
NHAHAYGGPDLMVQTVEELLHIPIDHYIAVDMDGFVDVINTLGGVSVVNEKSFSIDGYDF
HHHHCCCCHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHCCCEEECCCCCCCCCCCC
PKGTLSLNGEKALAYVRMRKEDPAGDAGRTSRQRDVMESAIAKGLQVGNLANIPAFLQSL
CCCCEEECCCHHEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
SDAIETDLTLTEMLHYVSAYRPAAQSIKQLDVAYREETVDGLWFAVLPQEEVERIGNELR
HHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHH
THLTIN
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]