| Definition | Bacillus clausii KSM-K16, complete genome. |
|---|---|
| Accession | NC_006582 |
| Length | 4,303,871 |
Click here to switch to the map view.
The map label for this gene is pucG [H]
Identifier: 56965499
GI number: 56965499
Start: 3897503
End: 3898744
Strand: Direct
Name: pucG [H]
Synonym: ABC3739
Alternate gene names: 56965499
Gene position: 3897503-3898744 (Clockwise)
Preceding gene: 56965498
Following gene: 56965514
Centisome position: 90.56
GC content: 51.13
Gene sequence:
>1242_bases ATGGATACGTACCTTTCAGCAAAGCGGACGATTATGACGCCAGGGCCGGTAGAAGTCGACCCCCGTGTCTTGCAGGCAAT GAGCATGCCGATTCTAGGGCAATTTGACCCTGCTTTTACGAACATCATGAATCAGACGATGGACCAACTGCGCAAGTTGT TCCAAACAGAAAACGAGTGGGCCTATCCCGTTGACGGGACGTCACGTTCAGGGATTGAGGCTGTTCTCGCCAGTTTAATT GAACGAGGAGACCGTGTGCTTGTGCCGATTTACGGACGTTTCGGCCATTTGCTTGTAGAAATTTGCGAACGTTACGGGGC CGATGTCCACAAAATCGAATGTACGTGGGGCACTGTGTTTAGCGAAGAAGAAGTAATCAACCACATCCACGCAATCAAGC CTAACATTGTCGCGTGTGTCCATGGGGAAACGTCAACTGGATGCATGCAACCACTCGCCCAAATCGGCAAAGCTTGCCGT GAACAAGGTTGCCTGTTTGTTGTTGATGCGGTTGCTACGATTGGGGGAACCGACGTTTTAGTCGATGAATGGCACATTGA TGCTGCTATTGGCGGCACGCAAAAATGCTTGTCCGTCCCGGCTGGCATGGCACCGATTACGTACAATCAACGAGTGGAAG AAGTGATTGCCCGCCGCAAAAAAGTCGAACAAGGAATTGCAACCAAAGACGACTTGGACGAACCACTGCGAGGGACAGTT GTCGCCAGCAACTATTTTGACCTTGGCATGCTGCAGGATTACTGGAGTCCAAGGCGTTTGAACCACCATACGGAAGCAAC CTCCATGGTGTATGCTCTCCATAAAGGGTTAGCGATTCTTCTGGAAGAAGGGCTCCCCCACCGGTTTGCGCGACACGCGT ACCATGAAAAAGCGCTTATTGCCGGTCTAACAGCAATGGGGCTTGAGTTATTTGTCTCCCATCAGCACAAATTGCCGATG GTGACGTGCGTGTGCGTACCTGTTGGGCTTGACGCTGATCGCGTGCGTGCCTTTATGTTGCACCATTTTGGCGTAGAGAT CGCTAGCTCTTTCGGACCGCTCTATGGGAAAATCTGGCGGATTGGCACAATGGGCTATAGCTGTCGCAAGGAAAACATTT TGTTTGTGCTCGCAGCACTTGAGGCAGCGCTTCTCCATTACGGTACAAAGATTGAAACCGGTAAAGCCGTCCAAGCGGCG CTTTCCTACTACGAACAAACAGAAAAGTCCGCAATGGCCTAA
Upstream 100 bases:
>100_bases CGATGAAGATTTGGAAGCTGGCGTATCTGCACTTGCCGCCCTTTTGTATAAGCTTGCCTATTAGTTTAAAGCTGCAAAAT GTTTTTGAAGGAGAATTGCA
Downstream 100 bases:
>100_bases ACAGCGAGTTGGCCAAGGCGCTGTCAGCCGCTTGGCACCCGTATGGGGAGAGCGAATTCACCATTTGACCGAGCTCCTCT CTGCAAAGACGATGCCGAAT
Product: aminotransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 413; Mature: 413
Protein sequence:
>413_residues MDTYLSAKRTIMTPGPVEVDPRVLQAMSMPILGQFDPAFTNIMNQTMDQLRKLFQTENEWAYPVDGTSRSGIEAVLASLI ERGDRVLVPIYGRFGHLLVEICERYGADVHKIECTWGTVFSEEEVINHIHAIKPNIVACVHGETSTGCMQPLAQIGKACR EQGCLFVVDAVATIGGTDVLVDEWHIDAAIGGTQKCLSVPAGMAPITYNQRVEEVIARRKKVEQGIATKDDLDEPLRGTV VASNYFDLGMLQDYWSPRRLNHHTEATSMVYALHKGLAILLEEGLPHRFARHAYHEKALIAGLTAMGLELFVSHQHKLPM VTCVCVPVGLDADRVRAFMLHHFGVEIASSFGPLYGKIWRIGTMGYSCRKENILFVLAALEAALLHYGTKIETGKAVQAA LSYYEQTEKSAMA
Sequences:
>Translated_413_residues MDTYLSAKRTIMTPGPVEVDPRVLQAMSMPILGQFDPAFTNIMNQTMDQLRKLFQTENEWAYPVDGTSRSGIEAVLASLI ERGDRVLVPIYGRFGHLLVEICERYGADVHKIECTWGTVFSEEEVINHIHAIKPNIVACVHGETSTGCMQPLAQIGKACR EQGCLFVVDAVATIGGTDVLVDEWHIDAAIGGTQKCLSVPAGMAPITYNQRVEEVIARRKKVEQGIATKDDLDEPLRGTV VASNYFDLGMLQDYWSPRRLNHHTEATSMVYALHKGLAILLEEGLPHRFARHAYHEKALIAGLTAMGLELFVSHQHKLPM VTCVCVPVGLDADRVRAFMLHHFGVEIASSFGPLYGKIWRIGTMGYSCRKENILFVLAALEAALLHYGTKIETGKAVQAA LSYYEQTEKSAMA >Mature_413_residues MDTYLSAKRTIMTPGPVEVDPRVLQAMSMPILGQFDPAFTNIMNQTMDQLRKLFQTENEWAYPVDGTSRSGIEAVLASLI ERGDRVLVPIYGRFGHLLVEICERYGADVHKIECTWGTVFSEEEVINHIHAIKPNIVACVHGETSTGCMQPLAQIGKACR EQGCLFVVDAVATIGGTDVLVDEWHIDAAIGGTQKCLSVPAGMAPITYNQRVEEVIARRKKVEQGIATKDDLDEPLRGTV VASNYFDLGMLQDYWSPRRLNHHTEATSMVYALHKGLAILLEEGLPHRFARHAYHEKALIAGLTAMGLELFVSHQHKLPM VTCVCVPVGLDADRVRAFMLHHFGVEIASSFGPLYGKIWRIGTMGYSCRKENILFVLAALEAALLHYGTKIETGKAVQAA LSYYEQTEKSAMA
Specific function: Could encode ureidoglycolase or L-alanine:glyoxylate aminotransferase, or perhaps both activities [H]
COG id: COG0075
COG function: function code E; Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI4557289, Length=383, Percent_Identity=32.6370757180157, Blast_Score=216, Evalue=3e-56, Organism=Caenorhabditis elegans, GI17536281, Length=377, Percent_Identity=36.604774535809, Blast_Score=232, Evalue=2e-61, Organism=Saccharomyces cerevisiae, GI6321079, Length=386, Percent_Identity=24.3523316062176, Blast_Score=91, Evalue=3e-19, Organism=Drosophila melanogaster, GI17530823, Length=390, Percent_Identity=35.6410256410256, Blast_Score=250, Evalue=1e-66,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000192 - InterPro: IPR020578 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00266 Aminotran_5 [H]
EC number: NA
Molecular weight: Translated: 45699; Mature: 45699
Theoretical pI: Translated: 6.46; Mature: 6.46
Prosite motif: PS00595 AA_TRANSFER_CLASS_5
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTYLSAKRTIMTPGPVEVDPRVLQAMSMPILGQFDPAFTNIMNQTMDQLRKLFQTENEW CCCCCCCCCEEECCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCE AYPVDGTSRSGIEAVLASLIERGDRVLVPIYGRFGHLLVEICERYGADVHKIECTWGTVF ECCCCCCCCCCHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHCCCEEEEEEEECCCC SEEEVINHIHAIKPNIVACVHGETSTGCMQPLAQIGKACREQGCLFVVDAVATIGGTDVL CHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEHHHHCCCCEEE VDEWHIDAAIGGTQKCLSVPAGMAPITYNQRVEEVIARRKKVEQGIATKDDLDEPLRGTV EEEEEECHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEE VASNYFDLGMLQDYWSPRRLNHHTEATSMVYALHKGLAILLEEGLPHRFARHAYHEKALI EECCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH AGLTAMGLELFVSHQHKLPMVTCVCVPVGLDADRVRAFMLHHFGVEIASSFGPLYGKIWR HHHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHH IGTMGYSCRKENILFVLAALEAALLHYGTKIETGKAVQAALSYYEQTEKSAMA EECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDTYLSAKRTIMTPGPVEVDPRVLQAMSMPILGQFDPAFTNIMNQTMDQLRKLFQTENEW CCCCCCCCCEEECCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCE AYPVDGTSRSGIEAVLASLIERGDRVLVPIYGRFGHLLVEICERYGADVHKIECTWGTVF ECCCCCCCCCCHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHCCCEEEEEEEECCCC SEEEVINHIHAIKPNIVACVHGETSTGCMQPLAQIGKACREQGCLFVVDAVATIGGTDVL CHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEHHHHCCCCEEE VDEWHIDAAIGGTQKCLSVPAGMAPITYNQRVEEVIARRKKVEQGIATKDDLDEPLRGTV EEEEEECHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEE VASNYFDLGMLQDYWSPRRLNHHTEATSMVYALHKGLAILLEEGLPHRFARHAYHEKALI EECCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH AGLTAMGLELFVSHQHKLPMVTCVCVPVGLDADRVRAFMLHHFGVEIASSFGPLYGKIWR HHHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHH IGTMGYSCRKENILFVLAALEAALLHYGTKIETGKAVQAALSYYEQTEKSAMA EECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377; 11344136 [H]