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The map label for this gene is ssuC [H]

Identifier: 56965478

GI number: 56965478

Start: 3872726

End: 3873493

Strand: Direct

Name: ssuC [H]

Synonym: ABC3716

Alternate gene names: 56965478

Gene position: 3872726-3873493 (Clockwise)

Preceding gene: 56965477

Following gene: 56965479

Centisome position: 89.98

GC content: 48.05

Gene sequence:

>768_bases
ATGACGAATACATTTCAAAAACAAATCCTTCCTTGGATGCTGCCGTTGTTGTTCCTTGTTATCTGGCAAATCATATCGAT
GCTTGAAATTGTCTCCCCTAGTTTGTTTCCGGCGCCGACATCAGTGCTCGAGTCCTTCTATGAGCTGGTCGTTTCAGGCA
CGCTTTTAGAACATGTTCAAATCAGTTTATATCGGGCGTTCATCGGCTTACTCATTGGCGGCGCAATCGGGCTCCTGCTT
GGCATTTTGAACGGCTGGTCAACGTGGTCCTTTTACACGGTTGATACGTTTGTACAAATGATCCGCAACATTCCTCACCT
CGCCTTGCTGCCTCTTGTGATTGTCTGGCTCGGGATCGGGGAAGCGTCGAAAATTTTTCTTGTTGCCCTTGGTGTCATGT
TCCCGATCTACATTAATACATTGCATGGCATCCGCAGCGTCAATCGAGGCTATATTGAAATGGGGAAAATGTATGGCCTA
AAAGGCTGGGGGCTTTTCCGCCATGTCTACCTCCCTGGGGCGTTGCCTTCCATTTTTGTCGGCATTCGCTATGCCCTCGG
AGTGATGTGGTTGACATTAATTGTCGCTGAGACCATTGCCACAAGCGACGGCATCGGCTATTTGGCCATGAATGCACGGC
AGTTTATGCAAACCGAGGTTATTATTGTTACCATTATTATCTACGCCCTTTTTGGCAAGCTGGCGGACATTATCGCCCAA
TTCGGGGAGAAAAAAGCGCTTCGCTGGCATCCGAATTATCGGAAATAG

Upstream 100 bases:

>100_bases
CCGTATTGGCCTCATTGAAAACGAAGTCGACGTTTCCGAAATCATGCCTGTTGATGCAGCATGGGCAACAGACAACATTG
AATAACAAGTAGGTGCCAAC

Downstream 100 bases:

>100_bases
GAGAGAACGATTATGGCTATAGCAAAACAAACGACAAAGCGCGGCGTTGAAATCCGCATCGCACAATTGCAAAAAACGTT
TGGTGATCAAAATGTGATAA

Product: nitrate/sulfonate/bicarbonate ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 254

Protein sequence:

>255_residues
MTNTFQKQILPWMLPLLFLVIWQIISMLEIVSPSLFPAPTSVLESFYELVVSGTLLEHVQISLYRAFIGLLIGGAIGLLL
GILNGWSTWSFYTVDTFVQMIRNIPHLALLPLVIVWLGIGEASKIFLVALGVMFPIYINTLHGIRSVNRGYIEMGKMYGL
KGWGLFRHVYLPGALPSIFVGIRYALGVMWLTLIVAETIATSDGIGYLAMNARQFMQTEVIIVTIIIYALFGKLADIIAQ
FGEKKALRWHPNYRK

Sequences:

>Translated_255_residues
MTNTFQKQILPWMLPLLFLVIWQIISMLEIVSPSLFPAPTSVLESFYELVVSGTLLEHVQISLYRAFIGLLIGGAIGLLL
GILNGWSTWSFYTVDTFVQMIRNIPHLALLPLVIVWLGIGEASKIFLVALGVMFPIYINTLHGIRSVNRGYIEMGKMYGL
KGWGLFRHVYLPGALPSIFVGIRYALGVMWLTLIVAETIATSDGIGYLAMNARQFMQTEVIIVTIIIYALFGKLADIIAQ
FGEKKALRWHPNYRK
>Mature_254_residues
TNTFQKQILPWMLPLLFLVIWQIISMLEIVSPSLFPAPTSVLESFYELVVSGTLLEHVQISLYRAFIGLLIGGAIGLLLG
ILNGWSTWSFYTVDTFVQMIRNIPHLALLPLVIVWLGIGEASKIFLVALGVMFPIYINTLHGIRSVNRGYIEMGKMYGLK
GWGLFRHVYLPGALPSIFVGIRYALGVMWLTLIVAETIATSDGIGYLAMNARQFMQTEVIIVTIIIYALFGKLADIIAQF
GEKKALRWHPNYRK

Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=247, Percent_Identity=57.085020242915, Blast_Score=270, Evalue=9e-74,
Organism=Escherichia coli, GI1786564, Length=239, Percent_Identity=32.6359832635983, Blast_Score=134, Evalue=4e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 28666; Mature: 28535

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HCCCCCEECCCCCCC
>Mature Secondary Structure 
TNTFQKQILPWMLPLLFLVIWQIISMLEIVSPSLFPAPTSVLESFYELVVSGTLLEHVQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
ISLYRAFIGLLIGGAIGLLLGILNGWSTWSFYTVDTFVQMIRNIPHLALLPLVIVWLGIG
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC
EASKIFLVALGVMFPIYINTLHGIRSVNRGYIEMGKMYGLKGWGLFRHVYLPGALPSIFV
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHH
GIRYALGVMWLTLIVAETIATSDGIGYLAMNARQFMQTEVIIVTIIIYALFGKLADIIAQ
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FGEKKALRWHPNYRK
HCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10506196; 8905232; 9278503 [H]