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The map label for this gene is ycaK [H]

Identifier: 56965444

GI number: 56965444

Start: 3838406

End: 3838999

Strand: Direct

Name: ycaK [H]

Synonym: ABC3682

Alternate gene names: 56965444

Gene position: 3838406-3838999 (Clockwise)

Preceding gene: 56965436

Following gene: 56965445

Centisome position: 89.18

GC content: 44.61

Gene sequence:

>594_bases
ATGAACGTGTTAACGGTTGTTTCACATCCAAGAAAGGATTCCTTGACCTTTAAAGTCGCTGAACGTTTCGCACAAGGGCT
AGCCGACGCCGGTCATGAGTATGAGCTGTTGGATTTACATGAAAGTGGTTTTGACCCTGTTTTAAAAGGGATAGATGAAC
CTGATTGGACCGTGGCGGAGCAGCCTTTCTCGCCTGAAGTGGAAGCGGAAATAAAGCGGTTAAAGAAGCATGATGCGTTG
GCTTTTATTTATCCAATTTGGTGGTGGCATTTGCCAGCGATGCTAAAGGGGTATATTGATCGCGTTTTTAACAATGGGTT
TGCGTACGGTTCGAGCCATCTTCACCATCAGCATGTGTTATGGCTTGGGTTGGCCGGCGTTTCGAAAGAACAGATGAAAA
AGCGCGATTATGATGAAAAGATGACGCATTTGCTCAATGTAGGCATTGCCGATTATTGCGGTATCTCCAACTCCAAAGTT
GAATTCCTATATGAGACACTCGATTCAAAGCCAGAACATTACGAAAGGCTGCTCGATCAAGCTTACCGCTTCGGTTTAAA
TTATGGCAAGGATGAACTGATTGCGACTCAATAA

Upstream 100 bases:

>100_bases
AAGTACGTACTTCCAGATCGTTTTCTTACTGTTTATAATAGCATCAGCCATTATGGATGGCTATACATGAGCTGTAGAGA
AAGGTCGTGACGATATAAGC

Downstream 100 bases:

>100_bases
AGTTGCCTGAGCCATGCCGAATATTGATTTTAGCGAACAGTGGAATTGCGGGTAGGAAAGGCTTATGCAACGGACAATCG
GTTTTACAACCAGTAAGAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MNVLTVVSHPRKDSLTFKVAERFAQGLADAGHEYELLDLHESGFDPVLKGIDEPDWTVAEQPFSPEVEAEIKRLKKHDAL
AFIYPIWWWHLPAMLKGYIDRVFNNGFAYGSSHLHHQHVLWLGLAGVSKEQMKKRDYDEKMTHLLNVGIADYCGISNSKV
EFLYETLDSKPEHYERLLDQAYRFGLNYGKDELIATQ

Sequences:

>Translated_197_residues
MNVLTVVSHPRKDSLTFKVAERFAQGLADAGHEYELLDLHESGFDPVLKGIDEPDWTVAEQPFSPEVEAEIKRLKKHDAL
AFIYPIWWWHLPAMLKGYIDRVFNNGFAYGSSHLHHQHVLWLGLAGVSKEQMKKRDYDEKMTHLLNVGIADYCGISNSKV
EFLYETLDSKPEHYERLLDQAYRFGLNYGKDELIATQ
>Mature_197_residues
MNVLTVVSHPRKDSLTFKVAERFAQGLADAGHEYELLDLHESGFDPVLKGIDEPDWTVAEQPFSPEVEAEIKRLKKHDAL
AFIYPIWWWHLPAMLKGYIDRVFNNGFAYGSSHLHHQHVLWLGLAGVSKEQMKKRDYDEKMTHLLNVGIADYCGISNSKV
EFLYETLDSKPEHYERLLDQAYRFGLNYGKDELIATQ

Specific function: Unknown

COG id: COG2249

COG function: function code R; Putative NADPH-quinone reductase (modulator of drug activity B)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NAD(P)H dehydrogenase (quinone) family [H]

Homologues:

Organism=Escherichia coli, GI1787129, Length=185, Percent_Identity=37.2972972972973, Blast_Score=127, Evalue=3e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003680 [H]

Pfam domain/function: PF02525 Flavodoxin_2 [H]

EC number: 1.6.99.- [C]

Molecular weight: Translated: 22749; Mature: 22749

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVLTVVSHPRKDSLTFKVAERFAQGLADAGHEYELLDLHESGFDPVLKGIDEPDWTVAE
CCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHCCCCCCCCCCC
QPFSPEVEAEIKRLKKHDALAFIYPIWWWHLPAMLKGYIDRVFNNGFAYGSSHLHHQHVL
CCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH
WLGLAGVSKEQMKKRDYDEKMTHLLNVGIADYCGISNSKVEFLYETLDSKPEHYERLLDQ
HHHCCCCCHHHHHHCCHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHH
AYRFGLNYGKDELIATQ
HHHHCCCCCCCCCEECC
>Mature Secondary Structure
MNVLTVVSHPRKDSLTFKVAERFAQGLADAGHEYELLDLHESGFDPVLKGIDEPDWTVAE
CCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHCCCCCCCCCCC
QPFSPEVEAEIKRLKKHDALAFIYPIWWWHLPAMLKGYIDRVFNNGFAYGSSHLHHQHVL
CCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH
WLGLAGVSKEQMKKRDYDEKMTHLLNVGIADYCGISNSKVEFLYETLDSKPEHYERLLDQ
HHHCCCCCHHHHHHCCHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHH
AYRFGLNYGKDELIATQ
HHHHCCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 3053170; 7567469 [H]