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The map label for this gene is 56965322

Identifier: 56965322

GI number: 56965322

Start: 3706766

End: 3707677

Strand: Direct

Name: 56965322

Synonym: ABC3560

Alternate gene names: NA

Gene position: 3706766-3707677 (Clockwise)

Preceding gene: 56965313

Following gene: 56965323

Centisome position: 86.13

GC content: 36.84

Gene sequence:

>912_bases
ATGGATAATCGAATTGGCATGGAGATCCGAAACTTAAGGATGAAACTAGGCATGTCGCAAGAAAATATTAGCTCTAGCGT
TGTCAGCCAATCAGCAATAAGCAAAATTGAAAATGGGAAGTACATTCCAAACATAATCGTGCTTGAAGCCATTGCTTCTA
AACTAGGGGTGCCTGTCGACCATTTTTTAACGCTCAGCACGTCCTACAATGGTGAATACATCGAAACCACTTATGAAATG
ATTGAACAACTGTCTTTACATGAAGAGTACGAGGAACTGAACAGGCTAACTGCACAATTAATTGACTGTGGCCAGGCGGT
GGAATTCCCTAATTGGTTTAAAGATTATATAAGGATCCATCATCTGTTCTCCGAATATCAATGCAGGAAAAAGGATGCTC
AAACCACATGGATGAAATTAAAATGCATGGCGGGCTGTTTGCCATTTGAACAGTCTATTCAAACAAAGTTTCATTTATAT
TTAGGCATTATCCATTCCCACATGAAAACATATTCATATAGCGAAACGTTAGACTATTTACAAAAAAGCCTTGCATCGGT
TGAAGGAATTAAAGGAAAAAACACCTATTTGCACAAAAAAAACTTAAAAATCTATATTTTGTACCAAAAAACAATCATTG
AACTGAACTACCACCACTATGATGCTGCTTTAAAAGATATAGGACAAGGTCTGCAATTATCTAGGAATTATGCTTGTACG
GCATATGTCGGGCAATTTCTTTATTATAAAGGGCTATGTTTAGAAAAAAAAGGTGTTCCCTTCAAAAACATTTTAAAGCA
CTACGAGGAAGCGCATTTTTTTGCAAGCTTTACAAACAATTTGCCTTTCAAGAAACTGCTATCAGACAAACTTTCGGCCA
GGAAGGAAGAATCATATGGGGTCTACAACTGA

Upstream 100 bases:

>100_bases
CGATCTGATATATTTCTGATAAACGCCTGATAATCTTTCGATAACCATCCTCACTTAAAAAAACCAACTAATACAGGTTA
TGATAAGGAAGATGCATATG

Downstream 100 bases:

>100_bases
ACGACCGATTCAATTAAAAGAGTTCATTTCTCTAATGCGCCTTTACCGCCCTTCACTGTGGCTACTTGGGCTAGCTTTGT
TTTTAGTCCTGATGGAAACA

Product: transcriptional regulator

Products: NA

Alternate protein names: Helix-Turn-Helix Domain-Containing Protein

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MDNRIGMEIRNLRMKLGMSQENISSSVVSQSAISKIENGKYIPNIIVLEAIASKLGVPVDHFLTLSTSYNGEYIETTYEM
IEQLSLHEEYEELNRLTAQLIDCGQAVEFPNWFKDYIRIHHLFSEYQCRKKDAQTTWMKLKCMAGCLPFEQSIQTKFHLY
LGIIHSHMKTYSYSETLDYLQKSLASVEGIKGKNTYLHKKNLKIYILYQKTIIELNYHHYDAALKDIGQGLQLSRNYACT
AYVGQFLYYKGLCLEKKGVPFKNILKHYEEAHFFASFTNNLPFKKLLSDKLSARKEESYGVYN

Sequences:

>Translated_303_residues
MDNRIGMEIRNLRMKLGMSQENISSSVVSQSAISKIENGKYIPNIIVLEAIASKLGVPVDHFLTLSTSYNGEYIETTYEM
IEQLSLHEEYEELNRLTAQLIDCGQAVEFPNWFKDYIRIHHLFSEYQCRKKDAQTTWMKLKCMAGCLPFEQSIQTKFHLY
LGIIHSHMKTYSYSETLDYLQKSLASVEGIKGKNTYLHKKNLKIYILYQKTIIELNYHHYDAALKDIGQGLQLSRNYACT
AYVGQFLYYKGLCLEKKGVPFKNILKHYEEAHFFASFTNNLPFKKLLSDKLSARKEESYGVYN
>Mature_303_residues
MDNRIGMEIRNLRMKLGMSQENISSSVVSQSAISKIENGKYIPNIIVLEAIASKLGVPVDHFLTLSTSYNGEYIETTYEM
IEQLSLHEEYEELNRLTAQLIDCGQAVEFPNWFKDYIRIHHLFSEYQCRKKDAQTTWMKLKCMAGCLPFEQSIQTKFHLY
LGIIHSHMKTYSYSETLDYLQKSLASVEGIKGKNTYLHKKNLKIYILYQKTIIELNYHHYDAALKDIGQGLQLSRNYACT
AYVGQFLYYKGLCLEKKGVPFKNILKHYEEAHFFASFTNNLPFKKLLSDKLSARKEESYGVYN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35222; Mature: 35222

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNRIGMEIRNLRMKLGMSQENISSSVVSQSAISKIENGKYIPNIIVLEAIASKLGVPVD
CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHH
HFLTLSTSYNGEYIETTYEMIEQLSLHEEYEELNRLTAQLIDCGQAVEFPNWFKDYIRIH
HHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
HLFSEYQCRKKDAQTTWMKLKCMAGCLPFEQSIQTKFHLYLGIIHSHMKTYSYSETLDYL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
QKSLASVEGIKGKNTYLHKKNLKIYILYQKTIIELNYHHYDAALKDIGQGLQLSRNYACT
HHHHHHHCCCCCCCCEEEECCCEEEEEEEEEEEEECCHHHHHHHHHHCCCHHHCCCCHHH
AYVGQFLYYKGLCLEKKGVPFKNILKHYEEAHFFASFTNNLPFKKLLSDKLSARKEESYG
HHHHHHHHHHCCEECCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC
VYN
CCC
>Mature Secondary Structure
MDNRIGMEIRNLRMKLGMSQENISSSVVSQSAISKIENGKYIPNIIVLEAIASKLGVPVD
CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHH
HFLTLSTSYNGEYIETTYEMIEQLSLHEEYEELNRLTAQLIDCGQAVEFPNWFKDYIRIH
HHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
HLFSEYQCRKKDAQTTWMKLKCMAGCLPFEQSIQTKFHLYLGIIHSHMKTYSYSETLDYL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
QKSLASVEGIKGKNTYLHKKNLKIYILYQKTIIELNYHHYDAALKDIGQGLQLSRNYACT
HHHHHHHCCCCCCCCEEEECCCEEEEEEEEEEEEECCHHHHHHHHHHCCCHHHCCCCHHH
AYVGQFLYYKGLCLEKKGVPFKNILKHYEEAHFFASFTNNLPFKKLLSDKLSARKEESYG
HHHHHHHHHHCCEECCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC
VYN
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA