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The map label for this gene is yisS [H]

Identifier: 56965050

GI number: 56965050

Start: 3413155

End: 3414162

Strand: Direct

Name: yisS [H]

Synonym: ABC3286

Alternate gene names: 56965050

Gene position: 3413155-3414162 (Clockwise)

Preceding gene: 56965049

Following gene: 56965051

Centisome position: 79.3

GC content: 49.6

Gene sequence:

>1008_bases
ATGATTCAAGTTGCATTATTAAGCCGCTGGCATGTTCATGCCAATGATTATGCCAGCCAAGCACTGGAGAACCCTAATTT
GTCTGTCGTTGCTGTCTGGGATGAAGAACGAGAACGGGGAAGGCAGTGGGCGAAGGCGTTAGAGGTTGATTTTTTCGAAG
ATTTAAATGAATTGCTTGCCCAAGATCAAATCGACGGGGTGATTGTCGACACGCCTACTTCCATGCACAAAGAGGTAATT
CTTGCTTGTGCCGCTGCAAAAAAGCATATTTTTTCTGAAAAAGTGTTAGCGCTTACAGAAGAAGACTGTATCGCTATCTT
TGAAGCTGTAGATAAAAACAATGTCTCGTTAATGCTGTCATTGCCTCGTTTAAATGACCCGTCTTACATTTATGCGCAAC
AAGCACTTGACAACGGCTGGCTTGGCCAATTGACATCGATCCGTTGCCGGCTTGAACATGGCGGCGCTTTGCCAACAGAC
ACGCATCCAGACGGGTGGCTGCCTCCTCACTTCTATGACAAAAACCAATGCGGAGGCGGCGCCTTAATCGACTTAGGCGC
CCATCCGATTTATTTAACAAACCGCCTTGCTGGCGAAGCAGCGTCTGTCATGTGCGAAATGGTTTCGTTCACCGGGCGTG
AAGTCGATGACCATGCCTCAGTCATCGTCCGTTATGATTCTGGCGCCAGCGGTATTATCGAAGCCGGCTTTATTGGCAGT
TCCAGCCCATTTTTGCTTGAGTTGCATGGCACAGAAGGCAGTTTGCTCGTTGAAGACCACTCGGTCCGCATCCGCTCCAG
CCAACTTGGCGACGGATCTTGGCAAACGCCGACACTACCAGAGCCTGGACCAAGCGCCATCGCCCAATGGGTTGCCGAAA
TCAAAGATGGCAAAAAGCCGCATATTACACGAGAGGATATGCTCCGCTTAACACAAATCAATCAAGCTGCGCTGCAATCG
GCCACAGAAGGGCGCCGTGTTTTCTTAAAAAGCGCGCAACCCGTCTAA

Upstream 100 bases:

>100_bases
CTCCAACAAAGCGTGTTTGATAAAAATGAAACTTTTTTGTCTTGACAGCCATTCACTCACTCTCTAGTATGGACTTTAAT
AACTGCTGAGGAGGAGTACA

Downstream 100 bases:

>100_bases
TGTGTTTAACTTGGACGGTTTTCGGCAATGCGGTTGTTGAGGTGAGTGTACATGAAAACCGATATTGTCTTTTATGACGC
CCAATGCCCGTTGTGCCGAG

Product: NADH-dependent dyhydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MIQVALLSRWHVHANDYASQALENPNLSVVAVWDEERERGRQWAKALEVDFFEDLNELLAQDQIDGVIVDTPTSMHKEVI
LACAAAKKHIFSEKVLALTEEDCIAIFEAVDKNNVSLMLSLPRLNDPSYIYAQQALDNGWLGQLTSIRCRLEHGGALPTD
THPDGWLPPHFYDKNQCGGGALIDLGAHPIYLTNRLAGEAASVMCEMVSFTGREVDDHASVIVRYDSGASGIIEAGFIGS
SSPFLLELHGTEGSLLVEDHSVRIRSSQLGDGSWQTPTLPEPGPSAIAQWVAEIKDGKKPHITREDMLRLTQINQAALQS
ATEGRRVFLKSAQPV

Sequences:

>Translated_335_residues
MIQVALLSRWHVHANDYASQALENPNLSVVAVWDEERERGRQWAKALEVDFFEDLNELLAQDQIDGVIVDTPTSMHKEVI
LACAAAKKHIFSEKVLALTEEDCIAIFEAVDKNNVSLMLSLPRLNDPSYIYAQQALDNGWLGQLTSIRCRLEHGGALPTD
THPDGWLPPHFYDKNQCGGGALIDLGAHPIYLTNRLAGEAASVMCEMVSFTGREVDDHASVIVRYDSGASGIIEAGFIGS
SSPFLLELHGTEGSLLVEDHSVRIRSSQLGDGSWQTPTLPEPGPSAIAQWVAEIKDGKKPHITREDMLRLTQINQAALQS
ATEGRRVFLKSAQPV
>Mature_335_residues
MIQVALLSRWHVHANDYASQALENPNLSVVAVWDEERERGRQWAKALEVDFFEDLNELLAQDQIDGVIVDTPTSMHKEVI
LACAAAKKHIFSEKVLALTEEDCIAIFEAVDKNNVSLMLSLPRLNDPSYIYAQQALDNGWLGQLTSIRCRLEHGGALPTD
THPDGWLPPHFYDKNQCGGGALIDLGAHPIYLTNRLAGEAASVMCEMVSFTGREVDDHASVIVRYDSGASGIIEAGFIGS
SSPFLLELHGTEGSLLVEDHSVRIRSSQLGDGSWQTPTLPEPGPSAIAQWVAEIKDGKKPHITREDMLRLTQINQAALQS
ATEGRRVFLKSAQPV

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI87082405, Length=125, Percent_Identity=30.4, Blast_Score=68, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 36798; Mature: 36798

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQVALLSRWHVHANDYASQALENPNLSVVAVWDEERERGRQWAKALEVDFFEDLNELLA
CEEEEEEEEEEECCHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH
QDQIDGVIVDTPTSMHKEVILACAAAKKHIFSEKVLALTEEDCIAIFEAVDKNNVSLMLS
HHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHCCCCEEEEEE
LPRLNDPSYIYAQQALDNGWLGQLTSIRCRLEHGGALPTDTHPDGWLPPHFYDKNQCGGG
CCCCCCCCEEEEHHHCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
ALIDLGAHPIYLTNRLAGEAASVMCEMVSFTGREVDDHASVIVRYDSGASGIIEAGFIGS
EEEECCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCEEECCCCC
SSPFLLELHGTEGSLLVEDHSVRIRSSQLGDGSWQTPTLPEPGPSAIAQWVAEIKDGKKP
CCCEEEEEECCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC
HITREDMLRLTQINQAALQSATEGRRVFLKSAQPV
CCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC
>Mature Secondary Structure
MIQVALLSRWHVHANDYASQALENPNLSVVAVWDEERERGRQWAKALEVDFFEDLNELLA
CEEEEEEEEEEECCHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH
QDQIDGVIVDTPTSMHKEVILACAAAKKHIFSEKVLALTEEDCIAIFEAVDKNNVSLMLS
HHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHCCCCEEEEEE
LPRLNDPSYIYAQQALDNGWLGQLTSIRCRLEHGGALPTDTHPDGWLPPHFYDKNQCGGG
CCCCCCCCEEEEHHHCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
ALIDLGAHPIYLTNRLAGEAASVMCEMVSFTGREVDDHASVIVRYDSGASGIIEAGFIGS
EEEECCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCEEECCCCC
SSPFLLELHGTEGSLLVEDHSVRIRSSQLGDGSWQTPTLPEPGPSAIAQWVAEIKDGKKP
CCCEEEEEECCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC
HITREDMLRLTQINQAALQSATEGRRVFLKSAQPV
CCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353932; 9384377; 8407808 [H]